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M747DRAFT_298067-T1, M747DRAFT_298067-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298067-T1
Unique NameM747DRAFT_298067-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851931.1:177499..178532-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298067-T1 ID=M747DRAFT_298067-T1|Name=M747DRAFT_298067-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1034bp|location=Sequence derived from alignment at KZ851931.1:177499..178532- (Aspergillus niger ATCC 13496)
TCCAGGCTTGCTTATCTATCCCCTCATCTCCCTCCTCCCTTGCAATTACT
ACATACGGGATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAGTAAGT
CATACCCCGCGTTCCCCCGGAATGCCCCATCTCCATGCATGAAATACACC
CCCTAACGCAGGAACAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCC
GTATAGCGTAAGTGCACCCCTACTTGGATGGAATCGAATGACGGCTAATA
TTTTTGCTTTATGATAGGATGAAGAAAAAGTCAAGCTAAAGGGCGAGGTT
CGTTATATGCCCCGGACCACTACTATCTACTACTACGGCACCCCGCCGCG
GAACGACATAATAATGTATGCTGGATAGGTACATCGCCTGGTCGCCCCGC
GAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAG
GTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGC
AACCGACAACGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGG
TGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAAT
TTCTACAAAGTGAGTGATGCTAGAGGCTGGTGGAGTGGTGCCACCGGAAT
TGTTTGGAATGGGAAAATAGGTAGCAGACGGATGAGCTGATGGTTGTGCA
GGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAA
CAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAA
TGAGGGAGATAATATGGGGGATATAGCAAGAAGGGGGAAGTATAAAGTAT
CGCTCTGTGGCGATACAATTGCATATATGACCACGGGATATGGTCAAGAG
GAGTTAGGGGTTCATTAGGCTGATAAGTCTGGGCGTGTTTCTTTATATAT
CATTATTGCATGCGGTTGCTTTCAACGTTGTACCGGTTCGCGACTGTTCA
TACCCTTTCTGGAATACCTGCATCCCTACTGTCC
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Coding sequence (CDS) from alignment at KZ851931.1:177499..178532-

>M747DRAFT_298067-T1 ID=M747DRAFT_298067-T1|Name=M747DRAFT_298067-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2190bp|location=Sequence derived from alignment at KZ851931.1:177499..178532- (Aspergillus niger ATCC 13496)
GTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAAC
AAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAAT
GAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTC
GTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTT
GTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCG
AGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTT
TGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAA
GCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTAT
AGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAGTATACGCTATT
CTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGT
CGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGAGTACATCGCC
TGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAG
CGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGC
CTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCGAGGCGATCCACT
TCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGAC
TTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAAGCTAAAGGGCGA
GGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTATAGCATGGTTCTC
TCATTCATTCTTGTGCAGAATCGCCAGTATACGCTATTCTGGACGAGGTG
TTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAG
GTTGGAACACTTGGATAAGCTGGAATGAGTACATCGCCTGGTCGCCCCGC
GAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAG
GTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGC
AACCGACAACGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGG
TGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAAT
TTCTACAAAGATGAAGAAAAAGTCAAGCTAAAGGGCGAGGGGGAAGACGC
GGCTCGCGAAATGGTATGCGCCGTATAGCATGGTTCTCTCATTCATTCTT
GTGCAGAATCGCCAGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGA
GAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTT
GGATAAGCTGGAATGAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAAT
ACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGG
AGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGA
ACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGT
TCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGAT
GAAGAAAAAGTCAAGCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAAT
GGTATGCGCCGTATAGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGC
CAGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAA
ACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGA
ATGAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATT
TCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGG
TTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCT
CGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACG
TTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTC
AAGCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGT
ATAGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
APS2M747DRAFT_298067Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298067-T1M747DRAFT_298067-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298067-T1.cdsM747DRAFT_298067-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298067-T1.utr3p1M747DRAFT_298067-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298067-T1.exon5M747DRAFT_298067-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_298067-T1.exon4M747DRAFT_298067-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_298067-T1.exon3M747DRAFT_298067-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298067-T1.exon2M747DRAFT_298067-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298067-T1.exon1M747DRAFT_298067-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298067-T1.utr5p1M747DRAFT_298067-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR016635
DBxrefInterPro:IPR022775
DBxrefPFAM:PF01217
ProductAP-2 complex subunit sigma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851931.1supercontigKZ851931.1:177499..178532 -
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