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M747DRAFT_298094-T1, M747DRAFT_298094-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298094-T1
Unique NameM747DRAFT_298094-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851931.1:292782..293978-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298094-T1 ID=M747DRAFT_298094-T1|Name=M747DRAFT_298094-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1197bp|location=Sequence derived from alignment at KZ851931.1:292782..293978- (Aspergillus niger ATCC 13496)
CTTCACTTGATATACCCCAGGTAAATTCATTCATTCACCATTTCCGAATC
ACACATATACACCATGGGTGAGTATATTCTGTTCGCACTCTATCGCATGA
CCCCTCTACCACAATAACCTTCCTTGCACCCCACCCTCTACACCATACTC
ACCTCACGCGTCCACGCATCCCCAACTAACCACCCCTCCAGACGGCGGCT
ACAACAACTACAGCAGCACCTACAGCGGCGGTGGTGGCGGCGGCGGCGGC
TTCATGCCGGGCGAGATGAACAACAGCCCATCCGGAGGAAAGGTACACTC
ACCAACCCCTCACCCCATCCCATCTATCCCATTTCCCCCCACTAACAAGA
AATTAATCATATAACAGTCCGACTACACCAACTCCACCCTCCGCCCCATA
ACCATCAAACAAGCTCTGGACGCAGTTCAGCCATACCCGGAAGCGCCCTA
CCAAATCGACTCCGCCGAAATCTCCAGCATCTGCTTCATCGGACAAGTAC
GCAACATCAGCTCGCAAAGCACAAACGTCACATACAAGATCGACGACGGC
ACAGGCGAGATCGAAGCCAAGCAATGGATCGACTCCATGACGGCCGACTC
CATGGACACGGACGACATCAACAATACTAAGGCCGCCACCGGCAGGAGAG
ACGGTAAGGTAGAGTTGAACGGGTACGCGAAGGTGTTCGGAAAGTTGAAG
TCGTTTGGGAATAAGAGGTTTGTGGGTGCGCATTGCGTCCGCCCTGTTAA
GAGTCTGGATGAGGTGCATTGTCATTTGTTGGAGGCGAGTGCTGTGCATT
TGTTTTTCACGAGGGGGCCGCCTGGGGGTGGTGCCTCTGGTGCTGGGGGA
GTGGGTGATGTGGGTGCTAAGGGGGATGCGGCAATGGGAGGTACAGGGGA
TGACTACGGGGCTGGAAAGAATCTGCCTGCTATGAGTCCTGTTGCGAAGA
GAGTGTATCAATTGCTTAGGACGGAGCCGCAGAGCAATGAGGGGTTGCAT
GCGCAGTTGATTGCGGCGAAGCTGAGTTTGCCGATGCCGGATGTGGCCAG
GGCGGGAGATGAGTTGCTCACTGCGGGTGTGATCTTTTCGACGGTGGATG
AGCAGACGTGGGCGATTTTGGAGTTTTAATTGTAATATTCTTTTGTGTGG
GTAAAAATAATTTGACGTAATTATGGCAAGTATTGCATGAATTGAGG
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Coding sequence (CDS) from alignment at KZ851931.1:292782..293978-

>M747DRAFT_298094-T1 ID=M747DRAFT_298094-T1|Name=M747DRAFT_298094-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2601bp|location=Sequence derived from alignment at KZ851931.1:292782..293978- (Aspergillus niger ATCC 13496)
TCCGACTACACCAACTCCACCCTCCGCCCCATAACCATCAAACAAGCTCT
GGACGCAGTTCAGCCATACCCGGAAGCGCCCTACCAAATCGACTCCGCCG
AAATCTCCAGCATCTGCTTCATCGGACAAGTACGCAACATCAGCTCGCAA
AGCACAAACGTCACATACAAGATCGACGACGGCACAGGCGAGATCGAAGC
CAAGCAATGGATCGACTCCATGACGGCCGACTCCATGGACACGGACGACA
TCAACAATACTAAGGCCGCCACCGGCAGGAGAGACGGTAAGGTAGAGTTG
AACGGGTACGCGAAGGTGTTCGGAAAGTTGAAGTCGTTTGGGAATAAGAG
GTTTGTGGGTGCGCATTGCGTCCGCCCTGTTAAGAGTCTGGATGAGGTGC
ATTGTCATTTGTTGGAGGCGAGTGCTGTGCATTTGTTTTTCACGAGGGGG
CCGCCTGGGGGTGGTGCCTCTGGTGCTGGGGGAGTGGGTGATGTGGGTGC
TAAGGGGGATGCGGCAATGGGAGGTACAGGGGATGACTACGGGGCTGGAA
AGAATCTGCCTGCTATGAGTCCTGTTGCGAAGAGAGTGTATCAATTGCTT
AGGACGGAGCCGCAGAGCAATGAGGGGTTGCATGCGCAGTTGATTGCGGC
GAAGCTGAGTTTGCCGATGCCGGATGTGGCCAGGGCGGGAGATGAGTTGC
TCACTGCGGGTGTGATCTTTTCGACGGTGGATGAGCAGACGTGGGCGATT
TTGGAGTTTTAAACGGCGGCTACAACAACTACAGCAGCACCTACAGCGGC
GGTGGTGGCGGCGGCGGCGGCTTCATGCCGGGCGAGATGAACAACAGCCC
ATCCGGAGGAAAGATGGTCCGACTACACCAACTCCACCCTCCGCCCCATA
ACCATCAAACAAGCTCTGGACGCAGTTCAGCCATACCCGGAAGCGCCCTA
CCAAATCGACTCCGCCGAAATCTCCAGCATCTGCTTCATCGGACAAGTAC
GCAACATCAGCTCGCAAAGCACAAACGTCACATACAAGATCGACGACGGC
ACAGGCGAGATCGAAGCCAAGCAATGGATCGACTCCATGACGGCCGACTC
CATGGACACGGACGACATCAACAATACTAAGGCCGCCACCGGCAGGAGAG
ACGGTAAGGTAGAGTTGAACGGGTACGCGAAGGTGTTCGGAAAGTTGAAG
TCGTTTGGGAATAAGAGGTTTGTGGGTGCGCATTGCGTCCGCCCTGTTAA
GAGTCTGGATGAGGTGCATTGTCATTTGTTGGAGGCGAGTGCTGTGCATT
TGTTTTTCACGAGGGGGCCGCCTGGGGGTGGTGCCTCTGGTGCTGGGGGA
GTGGGTGATGTGGGTGCTAAGGGGGATGCGGCAATGGGAGGTACAGGGGA
TGACTACGGGGCTGGAAAGAATCTGCCTGCTATGAGTCCTGTTGCGAAGA
GAGTGTATCAATTGCTTAGGACGGAGCCGCAGAGCAATGAGGGGTTGCAT
GCGCAGTTGATTGCGGCGAAGCTGAGTTTGCCGATGCCGGATGTGGCCAG
GGCGGGAGATGAGTTGCTCACTGCGGGTGTGATCTTTTCGACGGTGGATG
AGCAGACGTGGGCGATTTTGGAGTTTTAAACGGCGGCTACAACAACTACA
GCAGCACCTACAGCGGCGGTGGTGGCGGCGGCGGCGGCTTCATGCCGGGC
GAGATGAACAACAGCCCATCCGGAGGAAAGATGGTCCGACTACACCAACT
CCACCCTCCGCCCCATAACCATCAAACAAGCTCTGGACGCAGTTCAGCCA
TACCCGGAAGCGCCCTACCAAATCGACTCCGCCGAAATCTCCAGCATCTG
CTTCATCGGACAAGTACGCAACATCAGCTCGCAAAGCACAAACGTCACAT
ACAAGATCGACGACGGCACAGGCGAGATCGAAGCCAAGCAATGGATCGAC
TCCATGACGGCCGACTCCATGGACACGGACGACATCAACAATACTAAGGC
CGCCACCGGCAGGAGAGACGGTAAGGTAGAGTTGAACGGGTACGCGAAGG
TGTTCGGAAAGTTGAAGTCGTTTGGGAATAAGAGGTTTGTGGGTGCGCAT
TGCGTCCGCCCTGTTAAGAGTCTGGATGAGGTGCATTGTCATTTGTTGGA
GGCGAGTGCTGTGCATTTGTTTTTCACGAGGGGGCCGCCTGGGGGTGGTG
CCTCTGGTGCTGGGGGAGTGGGTGATGTGGGTGCTAAGGGGGATGCGGCA
ATGGGAGGTACAGGGGATGACTACGGGGCTGGAAAGAATCTGCCTGCTAT
GAGTCCTGTTGCGAAGAGAGTGTATCAATTGCTTAGGACGGAGCCGCAGA
GCAATGAGGGGTTGCATGCGCAGTTGATTGCGGCGAAGCTGAGTTTGCCG
ATGCCGGATGTGGCCAGGGCGGGAGATGAGTTGCTCACTGCGGGTGTGAT
CTTTTCGACGGTGGATGAGCAGACGTGGGCGATTTTGGAGTTTTAAACGG
CGGCTACAACAACTACAGCAGCACCTACAGCGGCGGTGGTGGCGGCGGCG
GCGGCTTCATGCCGGGCGAGATGAACAACAGCCCATCCGGAGGAAAGATG
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006281DNA repair
GO:0006310DNA recombination
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298094M747DRAFT_298094Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298094-T1M747DRAFT_298094-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298094-T1.cdsM747DRAFT_298094-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298094-T1.utr3p1M747DRAFT_298094-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298094-T1.exon3M747DRAFT_298094-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298094-T1.exon2M747DRAFT_298094-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298094-T1.exon1M747DRAFT_298094-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298094-T1.utr5p1M747DRAFT_298094-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR014646
DBxrefInterPro:IPR014892
DBxrefInterPro:IPR036388
DBxrefPFAM:PF08784
Productreplication factor-a protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851931.1supercontigKZ851931.1:292782..293978 -
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