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M747DRAFT_298100-T1, M747DRAFT_298100-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298100-T1
Unique NameM747DRAFT_298100-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851931.1:322464..325072-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298100-T1 ID=M747DRAFT_298100-T1|Name=M747DRAFT_298100-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2609bp|location=Sequence derived from alignment at KZ851931.1:322464..325072- (Aspergillus niger ATCC 13496)
CCTCTTTCGATTTACTGCTTTCCTTCGTCGGTGCTCATTTTCGTGGAGCA
TTTTATCTGGACGAGCCCATCATGGCTCCGATCAACGGTTCCCGCAATGG
CAAACACTCAAAGCCTCAGCGCGGCGGTAACCTGAAGCGCAAGCGTGTCC
AAGAAGATTTGAACTCTCTCATCAAGAAGGTCGAGGATCTGGATGTCAAG
GAAACCATCGAACAATTTACCGATCTGCCCTTGTCTGAACCCACCGCGTC
CGGACTTGCCTCGTCCCACTACAAGACGTTAACCGATATTCAATCCCGTG
CGATCAGCCATGCGCTCAAGGGCCGCGATATTCTCGGTGCCGCAAAGACG
GGAAGCGGCAAAACGCTAGCCTTCCTGATTCCCATCCTGGAAAACCTATA
CCGCAAACAGTGGTCAGAGCACGATGGATTGGGTGCCCTGGTTCTGTCTC
CCACCCGCGAACTCGCGATTCAGATCTTCGAAGTCCTCCGCAAAGTCGGT
CGCTATCATACGTTCTCCGCCGGTCTGGTTATTGGTGGGAAGAGTCTGCG
GGAGGAGCAGGAGAGACTGGGACGGATGAATATTCTGGTGTGTACGCCTG
GACGCATGCTGCAGCACTTGGATCAGACTTCTTTCTTCGAGACGCACAAC
CTGCAGATGCTCGTGTTGGATGAGGCGGATCGCATCTTGGATATGGGTTT
CCAGAAGACTGTGGACGCTATTATCGGCCATCTTCCCAAGGAGCGCCAGA
CTCTACTTTTCAGTGCCACACAGACGAAGAAGGTGTCGGACTTGGCTCGA
CTGAGCTTGCAGGATCCCGAATATGTGGCTGTTCATGAGGCGGCCTCCTC
CGCTACGCCGTCCAAGCTTCAGCAACATTACGTCGTTACGCCCCTCCCGC
AGAAACTCGATGTTCTATGGAGTTTTATTCGGAGCAACCTGAAGTCCAAG
ACGATCGTTTTCCTGTCATCAGGAAAGCAGGTGCGTTTTGTCTACGAATC
CTTCCGTCACATGCAACCCGGTGTCCCGTTGATGCACCTTCACGGACGTC
AGAAGCAGGGTGGTCGACTCGATATTACTACCAAGTTCTCCTCGGCCCAA
CATGCAGTTCTGTTCGCCACCGATGTTGCTGCGCGTGGTCTGGACTTTCC
GGCCGTCGACTGGGTCATCCAACTGGACTGTCCTGAAGATGCCGATACCT
ATATTCACCGTGTTGGTCGTACAGCTAGATACGAGCGCGATGGTCGTGCC
GTGCTGTTCCTGGATCCTAGTGAGGAGAAGGGCATGTTGAAGCGTTTGGA
GCAGAAGAAGGTCCAGGTCGAACGCATCAACGTCAAGGCCAACAAGCAAC
AGAGCATTAAAGATCAGCTGCAAAACATGTGCTTCAAGGATCCCGAATTG
AAGTATCTGGGCCAGAAGGCCTTTATTTCCTACGCTAAGTCGGTCTACGT
CCAGAAGGACAAGGAGATCTTCAACATCAAGGAGCTGAAGCTGGATGAAT
TTGCGGGCAGCTTGGGACTTCCGGGTGCACCTCGCATCAAGTTCATTAAA
GGTGATGATACCAAGGAGCGGAAGAACGCGCCCCGTGCTACGGCATACCT
GTCCAGCGATGACGAGTCTGACGAAGAGGGTGAAAAGAAGAAGACTAAGA
AGGATGAGACGCAGGTGCGGACGAAGTATGACCGCATGTTTGAGCGTCGG
AACCAGGACGTGTTGGCCGACCATTACCACAAGCTCATTAACGACGACGG
CACGATGGTGGAAACTAATAAGGCTACTGAGGATGCGGATGAAGACGACG
ACTTCTTGTCCGTCAAGCGTCGCTACGAGGCCGGTGACAAGGATCTGGAT
GTCGGAGGATCTAGCTCGGAGGATGAGGAGGATGCGGACGGAACGGAGAA
GAAGGGAGCCAAGGTGGTCCATCTCGATGGCAAGGAGGCCCTGGTCATTG
ACTCGAAACGCCGCGAGAAGCTGCTCAAGTCGAAGAAGAAGCTTCTCAAG
TTCAAGGGCAAGGGCACGAAGCTTATCTACGATGATGAGGGCAATGCTCA
CGAGCTGTACGAAATGGAGGACGAAGAACAGTTCAAGGCCAAGGGCGACG
CCAAGGAGCAGCAGGCGAAGTTCCTGGCGGAGGAAGCGGAGCGCACTCGG
CAAGCGGATTTGGAGGACAAGGAAGTCGCCAAGCAGAAGAAGCGCGAGAA
GAAGGAGAAGCGCAAGGCCCGCGAGCGCGAGCTTCTTGCCATGGAGGAAG
AAGGAGGGGATTTGGTCCAGATCCCGTACAAGGAGGGCGGGCTCGCTTCG
GACGAAGACGAGGAGGTACTCCGGCCCAGCAAGAAGGCGCGAGTCTCCTT
TGCAGACGAAGCAAGCGAGGAGGAGCCCAAACCCAAGAAGGCCAAGAAGT
CTCAACCAGCTGGCAAAGCACCGGAGCAGATCGAGACTCTGGAAGATCTG
GAGTCGCTGGCCGCTGGCTTGCTGGGGTGATTTTAGTGTGTATACATTGT
GTCTTTGGTGGATATATCCCTTTCTGTCTAAGTTTCTTTCATTGTTCATC
AGCGGAGAGTGTCAAAAGTTTATGAGATTCCGGCAGCATAGCCATGTACA
TAGCACGAT
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Coding sequence (CDS) from alignment at KZ851931.1:322464..325072-

>M747DRAFT_298100-T1 ID=M747DRAFT_298100-T1|Name=M747DRAFT_298100-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2409bp|location=Sequence derived from alignment at KZ851931.1:322464..325072- (Aspergillus niger ATCC 13496)
ATGGCTCCGATCAACGGTTCCCGCAATGGCAAACACTCAAAGCCTCAGCG
CGGCGGTAACCTGAAGCGCAAGCGTGTCCAAGAAGATTTGAACTCTCTCA
TCAAGAAGGTCGAGGATCTGGATGTCAAGGAAACCATCGAACAATTTACC
GATCTGCCCTTGTCTGAACCCACCGCGTCCGGACTTGCCTCGTCCCACTA
CAAGACGTTAACCGATATTCAATCCCGTGCGATCAGCCATGCGCTCAAGG
GCCGCGATATTCTCGGTGCCGCAAAGACGGGAAGCGGCAAAACGCTAGCC
TTCCTGATTCCCATCCTGGAAAACCTATACCGCAAACAGTGGTCAGAGCA
CGATGGATTGGGTGCCCTGGTTCTGTCTCCCACCCGCGAACTCGCGATTC
AGATCTTCGAAGTCCTCCGCAAAGTCGGTCGCTATCATACGTTCTCCGCC
GGTCTGGTTATTGGTGGGAAGAGTCTGCGGGAGGAGCAGGAGAGACTGGG
ACGGATGAATATTCTGGTGTGTACGCCTGGACGCATGCTGCAGCACTTGG
ATCAGACTTCTTTCTTCGAGACGCACAACCTGCAGATGCTCGTGTTGGAT
GAGGCGGATCGCATCTTGGATATGGGTTTCCAGAAGACTGTGGACGCTAT
TATCGGCCATCTTCCCAAGGAGCGCCAGACTCTACTTTTCAGTGCCACAC
AGACGAAGAAGGTGTCGGACTTGGCTCGACTGAGCTTGCAGGATCCCGAA
TATGTGGCTGTTCATGAGGCGGCCTCCTCCGCTACGCCGTCCAAGCTTCA
GCAACATTACGTCGTTACGCCCCTCCCGCAGAAACTCGATGTTCTATGGA
GTTTTATTCGGAGCAACCTGAAGTCCAAGACGATCGTTTTCCTGTCATCA
GGAAAGCAGGTGCGTTTTGTCTACGAATCCTTCCGTCACATGCAACCCGG
TGTCCCGTTGATGCACCTTCACGGACGTCAGAAGCAGGGTGGTCGACTCG
ATATTACTACCAAGTTCTCCTCGGCCCAACATGCAGTTCTGTTCGCCACC
GATGTTGCTGCGCGTGGTCTGGACTTTCCGGCCGTCGACTGGGTCATCCA
ACTGGACTGTCCTGAAGATGCCGATACCTATATTCACCGTGTTGGTCGTA
CAGCTAGATACGAGCGCGATGGTCGTGCCGTGCTGTTCCTGGATCCTAGT
GAGGAGAAGGGCATGTTGAAGCGTTTGGAGCAGAAGAAGGTCCAGGTCGA
ACGCATCAACGTCAAGGCCAACAAGCAACAGAGCATTAAAGATCAGCTGC
AAAACATGTGCTTCAAGGATCCCGAATTGAAGTATCTGGGCCAGAAGGCC
TTTATTTCCTACGCTAAGTCGGTCTACGTCCAGAAGGACAAGGAGATCTT
CAACATCAAGGAGCTGAAGCTGGATGAATTTGCGGGCAGCTTGGGACTTC
CGGGTGCACCTCGCATCAAGTTCATTAAAGGTGATGATACCAAGGAGCGG
AAGAACGCGCCCCGTGCTACGGCATACCTGTCCAGCGATGACGAGTCTGA
CGAAGAGGGTGAAAAGAAGAAGACTAAGAAGGATGAGACGCAGGTGCGGA
CGAAGTATGACCGCATGTTTGAGCGTCGGAACCAGGACGTGTTGGCCGAC
CATTACCACAAGCTCATTAACGACGACGGCACGATGGTGGAAACTAATAA
GGCTACTGAGGATGCGGATGAAGACGACGACTTCTTGTCCGTCAAGCGTC
GCTACGAGGCCGGTGACAAGGATCTGGATGTCGGAGGATCTAGCTCGGAG
GATGAGGAGGATGCGGACGGAACGGAGAAGAAGGGAGCCAAGGTGGTCCA
TCTCGATGGCAAGGAGGCCCTGGTCATTGACTCGAAACGCCGCGAGAAGC
TGCTCAAGTCGAAGAAGAAGCTTCTCAAGTTCAAGGGCAAGGGCACGAAG
CTTATCTACGATGATGAGGGCAATGCTCACGAGCTGTACGAAATGGAGGA
CGAAGAACAGTTCAAGGCCAAGGGCGACGCCAAGGAGCAGCAGGCGAAGT
TCCTGGCGGAGGAAGCGGAGCGCACTCGGCAAGCGGATTTGGAGGACAAG
GAAGTCGCCAAGCAGAAGAAGCGCGAGAAGAAGGAGAAGCGCAAGGCCCG
CGAGCGCGAGCTTCTTGCCATGGAGGAAGAAGGAGGGGATTTGGTCCAGA
TCCCGTACAAGGAGGGCGGGCTCGCTTCGGACGAAGACGAGGAGGTACTC
CGGCCCAGCAAGAAGGCGCGAGTCTCCTTTGCAGACGAAGCAAGCGAGGA
GGAGCCCAAACCCAAGAAGGCCAAGAAGTCTCAACCAGCTGGCAAAGCAC
CGGAGCAGATCGAGACTCTGGAAGATCTGGAGTCGCTGGCCGCTGGCTTG
CTGGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP4M747DRAFT_298100Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298100-T1.cdsM747DRAFT_298100-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298100-T1.utr3p1M747DRAFT_298100-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298100-T1.exon1M747DRAFT_298100-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298100-T1.utr5p1M747DRAFT_298100-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298100-T1M747DRAFT_298100-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260YMF
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR025313
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF13959
DBxrefPFAM:PF00270
ProductATP-dependent RNA helicase dbp4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851931.1supercontigKZ851931.1:322464..325072 -
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