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M747DRAFT_298313-T1, M747DRAFT_298313-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298313-T1
Unique NameM747DRAFT_298313-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851934.1:72258..73355-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298313-T1 ID=M747DRAFT_298313-T1|Name=M747DRAFT_298313-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1098bp|location=Sequence derived from alignment at KZ851934.1:72258..73355- (Aspergillus niger ATCC 13496)
CGTTGATCCCCGAGCGGAGCCGGTCAATCTACTGCATACTTTACTGCGTC
ACTCCTCGTTCAAACTATTAACCGGTCAACAATGGCGCCTGCAAAGCCGA
ACAAAGTGTCTCGCATTACAGTGGCTTGTAATTCCTGCCGGTTTCGGAAA
CAGAAGGTGAGATTATACCTGATCCTCGTGATTCTTCCCATCTAACAGTC
TATGTGTTTCTAGTGCAGTGGGAATAAGTAAGTAGGAGGTCCCTCGTTCT
TACTTCAGACTTTTACTCATGCAATCCAATTTGCAAGGCCAATTTGTACT
CAATGCGACCAGCACAATCGGCCGTGCGACTGGCCCGAACAGTTGAAACG
GTAAGCTACGCCAACTGCTGAAATTTGAAGTGTATCAACCTTATACCTCT
TAGTGGCCCGGCAAAAGGTTATATAGAAGCCTTGGAGCATCGTCTCCATG
AAACAGAAAGTCTGCTTCTGAATCTACTCGCCCAAATCCCAGATTCTCAG
CTCTCTGCTTCGGTTCAGGGACGCCAAGATCGTTCAAGCAGGCATAGGAA
TAGCGGCAGTCCGCCACAAACGTACTCATCATCATCTTCCCGCCTCGGAA
AGCGAGGCACCGACTATTGGAAGAGATTTCCTCTACACACTGTCCAGGAC
ATCCGTGACTGGCAGAATGATTGTTTGAGCAATGATGGAGATGGTTCGAC
ACGACACTCTTCGGGACCTGAAGCCGTTAAGCGTCCTTCTGCCTCACAGT
CTGAATACCAACCGGAGACTGTATCTCCAAAAGACCAGATGCCTGAGTTT
CAAGGCTATCGCGACATGCCTACGCTACCACGGATACATCAGATCGAGAT
ACCAAACAGCCCGATAGATGCCGGTTCATCGCCGGCCAAAGTTGCATATG
GCAGTGGATTCGATGGTGAGGCCAGAGAGAATCGTCCACGGATGGATCCT
GTTTTCGAAGCAATACAGTATCAGCGCGCTCGAGCAGAAGCGGTCCATGA
GTTCCCTGGTATGCAGAAACCGAGTTTGTGGCGAGGTGCACCTTCTGTGA
GCTTTCAACAACAATTTCTTTGGTAGTCCATTAGACAATTGATATATG
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Coding sequence (CDS) from alignment at KZ851934.1:72258..73355-

>M747DRAFT_298313-T1 ID=M747DRAFT_298313-T1|Name=M747DRAFT_298313-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3300bp|location=Sequence derived from alignment at KZ851934.1:72258..73355- (Aspergillus niger ATCC 13496)
TGGCCCGGCAAAAGGTTATATAGAAGCCTTGGAGCATCGTCTCCATGAAA
CAGAAAGTCTGCTTCTGAATCTACTCGCCCAAATCCCAGATTCTCAGCTC
TCTGCTTCGGTTCAGGGACGCCAAGATCGTTCAAGCAGGCATAGGAATAG
CGGCAGTCCGCCACAAACGTACTCATCATCATCTTCCCGCCTCGGAAAGC
GAGGCACCGACTATTGGAAGAGATTTCCTCTACACACTGTCCAGGACATC
CGTGACTGGCAGAATGATTGTTTGAGCAATGATGGAGATGGTTCGACACG
ACACTCTTCGGGACCTGAAGCCGTTAAGCGTCCTTCTGCCTCACAGTCTG
AATACCAACCGGAGACTGTATCTCCAAAAGACCAGATGCCTGAGTTTCAA
GGCTATCGCGACATGCCTACGCTACCACGGATACATCAGATCGAGATACC
AAACAGCCCGATAGATGCCGGTTCATCGCCGGCCAAAGTTGCATATGGCA
GTGGATTCGATGGTGAGGCCAGAGAGAATCGTCCACGGATGGATCCTGTT
TTCGAAGCAATACAGTATCAGCGCGCTCGAGCAGAAGCGGTCCATGAGTT
CCCTGGTATGCAGAAACCGAGTTTGTGGCGAGGTGCACCTTCTGTGAGCT
TTCAACAACAATTTCTTTGGTAGGCCAATTTGTACTCAATGCGACCAGCA
CAATCGGCCGTGCGACTGGCCCGAACAGTTGAAACGTGCAGTGGGAATAA
ATGGCGCCTGCAAAGCCGAACAAAGTGTCTCGCATTACAGTGGCTTGTAA
TTCCTGCCGGTTTCGGAAACAGAAGTGGCCCGGCAAAAGGTTATATAGAA
GCCTTGGAGCATCGTCTCCATGAAACAGAAAGTCTGCTTCTGAATCTACT
CGCCCAAATCCCAGATTCTCAGCTCTCTGCTTCGGTTCAGGGACGCCAAG
ATCGTTCAAGCAGGCATAGGAATAGCGGCAGTCCGCCACAAACGTACTCA
TCATCATCTTCCCGCCTCGGAAAGCGAGGCACCGACTATTGGAAGAGATT
TCCTCTACACACTGTCCAGGACATCCGTGACTGGCAGAATGATTGTTTGA
GCAATGATGGAGATGGTTCGACACGACACTCTTCGGGACCTGAAGCCGTT
AAGCGTCCTTCTGCCTCACAGTCTGAATACCAACCGGAGACTGTATCTCC
AAAAGACCAGATGCCTGAGTTTCAAGGCTATCGCGACATGCCTACGCTAC
CACGGATACATCAGATCGAGATACCAAACAGCCCGATAGATGCCGGTTCA
TCGCCGGCCAAAGTTGCATATGGCAGTGGATTCGATGGTGAGGCCAGAGA
GAATCGTCCACGGATGGATCCTGTTTTCGAAGCAATACAGTATCAGCGCG
CTCGAGCAGAAGCGGTCCATGAGTTCCCTGGTATGCAGAAACCGAGTTTG
TGGCGAGGTGCACCTTCTGTGAGCTTTCAACAACAATTTCTTTGGTAGGC
CAATTTGTACTCAATGCGACCAGCACAATCGGCCGTGCGACTGGCCCGAA
CAGTTGAAACGTGCAGTGGGAATAAATGGCGCCTGCAAAGCCGAACAAAG
TGTCTCGCATTACAGTGGCTTGTAATTCCTGCCGGTTTCGGAAACAGAAG
TGGCCCGGCAAAAGGTTATATAGAAGCCTTGGAGCATCGTCTCCATGAAA
CAGAAAGTCTGCTTCTGAATCTACTCGCCCAAATCCCAGATTCTCAGCTC
TCTGCTTCGGTTCAGGGACGCCAAGATCGTTCAAGCAGGCATAGGAATAG
CGGCAGTCCGCCACAAACGTACTCATCATCATCTTCCCGCCTCGGAAAGC
GAGGCACCGACTATTGGAAGAGATTTCCTCTACACACTGTCCAGGACATC
CGTGACTGGCAGAATGATTGTTTGAGCAATGATGGAGATGGTTCGACACG
ACACTCTTCGGGACCTGAAGCCGTTAAGCGTCCTTCTGCCTCACAGTCTG
AATACCAACCGGAGACTGTATCTCCAAAAGACCAGATGCCTGAGTTTCAA
GGCTATCGCGACATGCCTACGCTACCACGGATACATCAGATCGAGATACC
AAACAGCCCGATAGATGCCGGTTCATCGCCGGCCAAAGTTGCATATGGCA
GTGGATTCGATGGTGAGGCCAGAGAGAATCGTCCACGGATGGATCCTGTT
TTCGAAGCAATACAGTATCAGCGCGCTCGAGCAGAAGCGGTCCATGAGTT
CCCTGGTATGCAGAAACCGAGTTTGTGGCGAGGTGCACCTTCTGTGAGCT
TTCAACAACAATTTCTTTGGTAGGCCAATTTGTACTCAATGCGACCAGCA
CAATCGGCCGTGCGACTGGCCCGAACAGTTGAAACGTGCAGTGGGAATAA
ATGGCGCCTGCAAAGCCGAACAAAGTGTCTCGCATTACAGTGGCTTGTAA
TTCCTGCCGGTTTCGGAAACAGAAGTGGCCCGGCAAAAGGTTATATAGAA
GCCTTGGAGCATCGTCTCCATGAAACAGAAAGTCTGCTTCTGAATCTACT
CGCCCAAATCCCAGATTCTCAGCTCTCTGCTTCGGTTCAGGGACGCCAAG
ATCGTTCAAGCAGGCATAGGAATAGCGGCAGTCCGCCACAAACGTACTCA
TCATCATCTTCCCGCCTCGGAAAGCGAGGCACCGACTATTGGAAGAGATT
TCCTCTACACACTGTCCAGGACATCCGTGACTGGCAGAATGATTGTTTGA
GCAATGATGGAGATGGTTCGACACGACACTCTTCGGGACCTGAAGCCGTT
AAGCGTCCTTCTGCCTCACAGTCTGAATACCAACCGGAGACTGTATCTCC
AAAAGACCAGATGCCTGAGTTTCAAGGCTATCGCGACATGCCTACGCTAC
CACGGATACATCAGATCGAGATACCAAACAGCCCGATAGATGCCGGTTCA
TCGCCGGCCAAAGTTGCATATGGCAGTGGATTCGATGGTGAGGCCAGAGA
GAATCGTCCACGGATGGATCCTGTTTTCGAAGCAATACAGTATCAGCGCG
CTCGAGCAGAAGCGGTCCATGAGTTCCCTGGTATGCAGAAACCGAGTTTG
TGGCGAGGTGCACCTTCTGTGAGCTTTCAACAACAATTTCTTTGGTAGGC
CAATTTGTACTCAATGCGACCAGCACAATCGGCCGTGCGACTGGCCCGAA
CAGTTGAAACGTGCAGTGGGAATAAATGGCGCCTGCAAAGCCGAACAAAG
TGTCTCGCATTACAGTGGCTTGTAATTCCTGCCGGTTTCGGAAACAGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298313M747DRAFT_298313Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298313-T1M747DRAFT_298313-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298313-T1.cdsM747DRAFT_298313-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298313-T1.utr3p1M747DRAFT_298313-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298313-T1.exon4M747DRAFT_298313-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_298313-T1.exon3M747DRAFT_298313-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298313-T1.exon2M747DRAFT_298313-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298313-T1.exon1M747DRAFT_298313-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298313-T1.utr5p1M747DRAFT_298313-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
ProductC6 finger domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851934.1supercontigKZ851934.1:72258..73355 -
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