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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851934.1:164471..165367+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_298343-T1 ID=M747DRAFT_298343-T1|Name=M747DRAFT_298343-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=897bp|location=Sequence derived from alignment at KZ851934.1:164471..165367+ (Aspergillus niger ATCC 13496) CCCCCCTTCTCCACCCTCCATTAGCTTCTCTGCAGCTCCTGTTTTTCCGG
TCAATTGCTTTCCCTCCCGGAACAGTTCGTCATCATGCGCTGCGCTAGCT
TCGCCGTGGCCCTCCTGGCCCTTTTCACTGGTCTCTACAGCTACCTGAAC
GCGCGCCTGGAGCAGTTCTACATCTTCGATCCCTCCCACCTGCACGACCT
GTCGCAGCGCGCCATTGCCGCTCATGGCAATGACACTCGCTCGGTGGTGA
ACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCACCGACACGCACCTGAAC
CTGGACGAGGAATGGGTCTTCAACAACGCCGGTGGTGCGATGGGGGCAAT
GTATATTATCCATGCTAGTGCGTCCCCTCTTTTGCTCCATACCACCTCTA
TAATTATCCATGGTGCCTGAACTAAGCTTTGATTCTCCTATAGGTATCAC
GGAGTACTTGATCATTTTCGGTATGGCTTCCCCTGTCTCCCGGATATTTT
TATGCCCTCGATTGCACGAGCTAACTACTCTCTCCCCGTCCATTAGGCAC
CGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGGCCGACGACTACT
TCAACATCCTTCAGGGCACCCAGCTCGCCTACGTCCCTGGATCCTACGAG
CCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCGCCGCGGTGAGGT
CAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGGAGTACGCCCGTG
GCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGATACCTTCTCCAGC
ACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAATCACTGGTCGCGA
GATGATCTCCAACCTGCTCAAGGGCAAGATGTGAATGATAGATGGCG back to topCoding sequence (CDS) from alignment at KZ851934.1:164471..165367+ >M747DRAFT_298343-T1 ID=M747DRAFT_298343-T1|Name=M747DRAFT_298343-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1944bp|location=Sequence derived from alignment at KZ851934.1:164471..165367+ (Aspergillus niger ATCC 13496) ATGCGCTGCGCTAGCTTCGCCGTGGCCCTCCTGGCCCTTTTCACTGGTCT CTACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCT CCCACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGAC ACTCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCAC CGACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTG GTGCGATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTG ATCATTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACAC GGCCGACGACTACTTCAACATCCTTCAGGGCACCCAGCTCGCCTACGTCC CTGGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTC CGCCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCT GGAGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCG ATACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGA ATCACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGAAT GCGCTGCGCTAGCTTCGCCGTGGCCCTCCTGGCCCTTTTCACTGGTCTCT ACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCTCC CACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGACAC TCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCACCG ACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTGGT GCGATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTGAT CATTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGG CCGACGACTACTTCAACATCCTTCAGGGCACCCAGCTCGCCTACGTCCCT GGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCG CCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGG AGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGAT ACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAAT CACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGAATGC GCTGCGCTAGCTTCGCCGTGGCCCTCCTGGCCCTTTTCACTGGTCTCTAC AGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCTCCCA CCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGACACTC GCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCACCGAC ACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTGGTGC GATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTGATCA TTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGGCC GACGACTACTTCAACATCCTTCAGGGCACCCAGCTCGCCTACGTCCCTGG ATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCGCC GCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGGAG TACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGATAC CTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAATCA CTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | SECRETED:SignalP(1-19) |
DBxref | InterPro:IPR006716 |
DBxref | PFAM:PF04622 |
Product | Squalene epoxidase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851934.1 | supercontig | KZ851934.1:164471..165367 + |
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