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M747DRAFT_298373-T1, M747DRAFT_298373-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298373-T1
Unique NameM747DRAFT_298373-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851934.1:237521..238331-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298373-T1 ID=M747DRAFT_298373-T1|Name=M747DRAFT_298373-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=811bp|location=Sequence derived from alignment at KZ851934.1:237521..238331- (Aspergillus niger ATCC 13496)
GCTCGTTCAGCGCATTCAACTCATACTCCTTGTAAGACACATTGATAAAC
TCTGTTCTCACTTGTGAGTGACTGATTTGCTCCTTATATTGCCAGCATTA
TATTGAAACTAGCTACTAATCTGTTGAACCCAGCTAAAAAACACCACTCC
CACTACACATCGTCATCATGTCTTTCCTCTTCGGCGGCGCCCCCAAGCTT
TCCTCGGAACAGAAGATTGCTGCGGCTGAGACGGAAGTTGAGATGGTCAC
CGACATGTTCAGCCGGTAAGATTCAATTATTATCATCCTGTCTATCCATT
TATAACGCTCATATTCCTTTCCTGCCAAACATTTGCCTATTCCCCGGACA
CTTTTTATACTTAACTAACCCACTCATGACCACCAGTCTCACCGAGTCCT
GCATCAAGAAGTGCATTCCCAACGACTACCGCGAAGGTGACCTGAACAAG
GGCGAGTCCGTCTGCATTGACCGCTGTGTTGGCAAGTTCTTCGAAGTCAA
CATGAAGGTCAGCGAGAAGATGCAGGGTGAGGCGAACCAGAAGGGCGGCA
TGGGTGGTTTCGGCATGTAAAGTGCGAGGTCAACGAAACGATTGTTCATC
TAATTGGATCTTTTTTCTGTTTTTCTATAAAACGTGTATAATCTATTCGG
GTTTCAGATCTGTCATGGTTGCTCTTCTGGATGGCTTGTTTTCCTTTGGT
CTCTCTTATGGCATGACTGATTGACTGACGGGAGCGGAAGGCCTGGGATT
TTGCTGATTGGGATGGATGACTTCTGCTCGGACATGGATATACAAGGTTG
TTTGCTTCTGG
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Coding sequence (CDS) from alignment at KZ851934.1:237521..238331-

>M747DRAFT_298373-T1 ID=M747DRAFT_298373-T1|Name=M747DRAFT_298373-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=564bp|location=Sequence derived from alignment at KZ851934.1:237521..238331- (Aspergillus niger ATCC 13496)
TCTCACCGAGTCCTGCATCAAGAAGTGCATTCCCAACGACTACCGCGAAG
GTGACCTGAACAAGGGCGAGTCCGTCTGCATTGACCGCTGTGTTGGCAAG
TTCTTCGAAGTCAACATGAAGGTCAGCGAGAAGATGCAGGGTGAGGCGAA
CCAGAAGGGCGGCATGGGTGGTTTCGGCATGTAAATGTCTTTCCTCTTCG
GCGGCGCCCCCAAGCTTTCCTCGGAACAGAAGATTGCTGCGGCTGAGACG
GAAGTTGAGATGGTCACCGACATGTTCAGCCGTCTCACCGAGTCCTGCAT
CAAGAAGTGCATTCCCAACGACTACCGCGAAGGTGACCTGAACAAGGGCG
AGTCCGTCTGCATTGACCGCTGTGTTGGCAAGTTCTTCGAAGTCAACATG
AAGGTCAGCGAGAAGATGCAGGGTGAGGCGAACCAGAAGGGCGGCATGGG
TGGTTTCGGCATGTAAATGTCTTTCCTCTTCGGCGGCGCCCCCAAGCTTT
CCTCGGAACAGAAGATTGCTGCGGCTGAGACGGAAGTTGAGATGGTCACC
GACATGTTCAGCCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIM10M747DRAFT_298373Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298373-T1M747DRAFT_298373-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298373-T1.cdsM747DRAFT_298373-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298373-T1.utr3p1M747DRAFT_298373-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298373-T1.exon3M747DRAFT_298373-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298373-T1.exon2M747DRAFT_298373-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298373-T1.exon1M747DRAFT_298373-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298373-T1.utr5p2M747DRAFT_298373-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_298373-T1.utr5p1M747DRAFT_298373-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035427
DBxrefInterPro:IPR004217
DBxrefPFAM:PF02953
Productprotein transporter tim10
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851934.1supercontigKZ851934.1:237521..238331 -
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