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M747DRAFT_298469-T1, M747DRAFT_298469-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298469-T1
Unique NameM747DRAFT_298469-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851935.1:265653..267081+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298469-T1 ID=M747DRAFT_298469-T1|Name=M747DRAFT_298469-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1429bp|location=Sequence derived from alignment at KZ851935.1:265653..267081+ (Aspergillus niger ATCC 13496)
CCCGACATCGAGGACCACCCGCTCGGCAACCACATCAAGATGGTGAGTGC
TATATTCGCGTTTGATGCTATCGGTGGAAAATGGACATGTCAAAAAAGCA
AGGGAACAATATCCTGAAAGAAAGAACCGCTGCCCAACCTTTCGTTGTAC
CGGAATCCCTATCTATCATTTTCGATCCTGCGTTTTGGCCGTTGAAGGAG
AAAAAAAAAAGACTTCATACCGAACGATTTTCGACCTTCCCCTGCTATGA
TGAACTTCCGTCCACCGATATGCTATGTTATATGGAATTGTGTGCTTGGA
AAGAGGATATGAATGACATGCGAGGGATTGAATGAATGGTCTTGCTGATT
GTTGGATTTTGTCGCCATCAGGTCCGTTACGCTGCTCAGGAGATTCCGGC
CGCTAAGAGCGCCCGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAGA
ACACCCGTGAGACCGCTCAGGCCATCAACGGCATGAAGCTGCAGCGCGCC
CTTACCTTCCTCAACAACGTCACCGAAAAGGCTGAGGCTGTCCCCATGCG
TCGGTACGCTGGCAGCACCGGTCGCTGCGCTCAGGGTGAGTGGATGTGTT
TTTCTACGTTGAAGATTTTGGAAAAGAGACGGAAGTGAAAACAACGGATC
GACAAGTGAACCGACATTGGCAGAATGTTTAGGGATGAAGAGGCTGGATG
GATACTTTTTTTTGGAGGATATGGCAAAAATCAAACTTTTTGGCAAACGA
AGACGCTGACCGTCTTCTTTCTCTTTAGGCAAGCAGTGGGGTGTCAGCAA
GGCTCGTTGGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAAGA
ACGCTGAGGCCAACGCCGACACCAAGGGTCTCGACACCGGCAACCTCGTT
GTCAAGCACATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACCTA
CCGTGCTCACGGTCGTGTATGTTGAAGCCGGAATCCGAGACATCCCTCCG
TCACGAATCCCCGCAAAACTAACAATTCGATTAGATCAACCCCTACATGA
CCAACCCCTGCCACATCGAGCTCATCCTTACCGAGGGTGAGGAGACCGTC
GCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGTGG
TGCTCAGCTCCGCCGTGCTCTCATTGAGGCATAAGCGGTGTGTGGGTGTC
GGGGGAAGTGTGAAGTGGTCAGAAACTGAATGGGAATGCCGGAGTTTGCT
GTTGTACGGATCCAATACCTGGTCACGGAAGGAATACAAAAGAAATTATT
ACTTTTTTGACAAATGGAAAAAATTCGAAACCACCCGGCGAGAATGATGA
TGGTGATGATGATGGTTTCTCTTATGCTCTATGCAGAGACAACATCTTTC
CTTTAGACATTGATCTCGTTTCACCCCCC
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Coding sequence (CDS) from alignment at KZ851935.1:265653..267081+

>M747DRAFT_298469-T1 ID=M747DRAFT_298469-T1|Name=M747DRAFT_298469-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2220bp|location=Sequence derived from alignment at KZ851935.1:265653..267081+ (Aspergillus niger ATCC 13496)
ATGGTCCGTTACGCTGCTCAGGAGATTCCGGCCGCTAAGAGCGCCCGCGC
CCGGGGCTCTTACCTGCGTGTCAGCTTCAAGAACACCCGTGAGACCGCTC
AGGCCATCAACGGCATGAAGCTGCAGCGCGCCCTTACCTTCCTCAACAAC
GTCACCGAAAAGGCTGAGGCTGTCCCCATGCGTCGGTACGCTGGCAGCAC
CGGTCGCTGCGCTCAGGGCAAGCAGTGGGGTGTCAGCAAGGCTCGTTGGC
CCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAAGAACGCTGAGGCC
AACGCCGACACCAAGGGTCTCGACACCGGCAACCTCGTTGTCAAGCACAT
CCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACCTACCGTGCTCACG
GTCGTATCAACCCCTACATGACCAACCCCTGCCACATCGAGCTCATCCTT
ACCGAGGGTGAGGAGACCGTCGCCAAGGGTCCCGCTGTCAAGGAGGTCCG
CCTCAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCCGTGCTCTCATTGAGG
CATAAATGGTCCGTTACGCTGCTCAGGAGATTCCGGCCGCTAAGAGCGCC
CGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAGAACACCCGTGAGAC
CGCTCAGGCCATCAACGGCATGAAGCTGCAGCGCGCCCTTACCTTCCTCA
ACAACGTCACCGAAAAGGCTGAGGCTGTCCCCATGCGTCGGTACGCTGGC
AGCACCGGTCGCTGCGCTCAGGGCAAGCAGTGGGGTGTCAGCAAGGCTCG
TTGGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAAGAACGCTG
AGGCCAACGCCGACACCAAGGGTCTCGACACCGGCAACCTCGTTGTCAAG
CACATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACCTACCGTGC
TCACGGTCGTATCAACCCCTACATGACCAACCCCTGCCACATCGAGCTCA
TCCTTACCGAGGGTGAGGAGACCGTCGCCAAGGGTCCCGCTGTCAAGGAG
GTCCGCCTCAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCCGTGCTCTCAT
TGAGGCATAAATGGTCCGTTACGCTGCTCAGGAGATTCCGGCCGCTAAGA
GCGCCCGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAGAACACCCGT
GAGACCGCTCAGGCCATCAACGGCATGAAGCTGCAGCGCGCCCTTACCTT
CCTCAACAACGTCACCGAAAAGGCTGAGGCTGTCCCCATGCGTCGGTACG
CTGGCAGCACCGGTCGCTGCGCTCAGGGCAAGCAGTGGGGTGTCAGCAAG
GCTCGTTGGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAAGAA
CGCTGAGGCCAACGCCGACACCAAGGGTCTCGACACCGGCAACCTCGTTG
TCAAGCACATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACCTAC
CGTGCTCACGGTCGTATCAACCCCTACATGACCAACCCCTGCCACATCGA
GCTCATCCTTACCGAGGGTGAGGAGACCGTCGCCAAGGGTCCCGCTGTCA
AGGAGGTCCGCCTCAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCCGTGCT
CTCATTGAGGCATAAATGGTCCGTTACGCTGCTCAGGAGATTCCGGCCGC
TAAGAGCGCCCGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAGAACA
CCCGTGAGACCGCTCAGGCCATCAACGGCATGAAGCTGCAGCGCGCCCTT
ACCTTCCTCAACAACGTCACCGAAAAGGCTGAGGCTGTCCCCATGCGTCG
GTACGCTGGCAGCACCGGTCGCTGCGCTCAGGGCAAGCAGTGGGGTGTCA
GCAAGGCTCGTTGGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTG
AAGAACGCTGAGGCCAACGCCGACACCAAGGGTCTCGACACCGGCAACCT
CGTTGTCAAGCACATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCA
CCTACCGTGCTCACGGTCGTATCAACCCCTACATGACCAACCCCTGCCAC
ATCGAGCTCATCCTTACCGAGGGTGAGGAGACCGTCGCCAAGGGTCCCGC
TGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCC
GTGCTCTCATTGAGGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL17M747DRAFT_298469Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298469-T1M747DRAFT_298469-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298469-T1.utr5p1M747DRAFT_298469-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298469-T1.exon1M747DRAFT_298469-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_298469-T1.exon2M747DRAFT_298469-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298469-T1.exon3M747DRAFT_298469-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298469-T1.exon4M747DRAFT_298469-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298469-T1.cdsM747DRAFT_298469-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298469-T1.utr3p1M747DRAFT_298469-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018260
DBxrefInterPro:IPR005721
DBxrefInterPro:IPR036394
DBxrefInterPro:IPR001063
DBxrefPFAM:PF00237
Product60S ribosomal protein L17
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851935.1supercontigKZ851935.1:265653..267081 +
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