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M747DRAFT_298640-T1, M747DRAFT_298640-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298640-T1
Unique NameM747DRAFT_298640-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851937.1:256284..257718-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298640-T1 ID=M747DRAFT_298640-T1|Name=M747DRAFT_298640-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1435bp|location=Sequence derived from alignment at KZ851937.1:256284..257718- (Aspergillus niger ATCC 13496)
CCCATTCACATTCACTCAACCCCGACTCCTGCCTGCCCCTCCCCTGCGAC
CATGATCCTGTCGGGGCCCTCTTTGTAATCCGTCATCAGAGATCCCATAG
TCACCGATGTGGTAGGGCACGCGTATCTTCATTTCGCATTTCATTCAACT
ACAGGTAAGTCCAACAGCAATTTTCCTATTTCAGGTAAGTCATCATACCC
TTCCCCCCCTTTGTCCATCGTCGTGACAAGATGCCATACTAAGACCATGT
AGTGCTATTTCCACCCAAGCGTTTACTCTCCCCCGCCTTCAATATAAACC
AATGGCGTCCCCCGCCCCTCCTTCTACCCCGAAAGCTGCATCTGCACCTG
CAGCAACACCCGATGGCTCTCAGACGCCTGGAAAGTGGCGTCATCCTCAT
CTGAACGAGGTCGTCCGTCGACAGAATGCTGGTACATTCGGAGATCGCAA
TATAAATAAGCTTGTGTGGAACACGGCCGCTTTGTTCGCGACCTGGGTGT
TTGGAGATACCGTCAAGTCATAGTGAGTGCTGCTAGCAGACACATCAAGT
GCGTGGTTCCAGGGGGCCTCCTAACCAGCGTCGCAACAGTTCGCTTTGGC
TTCAGAACATCAGTCCGATCTCTACATATCCCGATCTTTCATTGCTAGTC
CTACGAGTCATCTTTGCTCTGAACATCCTGATTGCATTGTACCCTCTCTT
TCGTCCGAAAGACAATTTCTCCGATATTCCATTGACCCCTACACAACGCT
CGCTTTTGGGACTGGATCCCTCCGCCACACAGTCACTGACCCCGGGCACG
ACGTACGTTACTCCGCCCAGGTACCGACTTTCTGCGTCTCGGAACGCCAG
CCCAGCCAGCAGATCCGGTTCGCCCTTGTCAGCAAGTGCTGGCGCTTCCG
GGCACAGGCTATCGTCAGGACCTTCATTTTCGCCTTCTCCGAGCCCGTTG
TTGCACAAAGTGGTCACGAATGGGAGCAAGGAGAGCGGGCGGAGGCCGAG
CTTCGGATCTTCGTCTCCGCTCGGGCGCAGCTCATCCTTCTCGCCCTTCA
AAGAATCTTCCTTTAAGGAGTCTACGTTCAAAGACTCTACATCCACGTTC
AGGGAGTCGACTATGTCGACATTTTCCGGCATGTCCAGCATTGCGCCTGC
AACTCCTTCACCAGTAGGTGGCAAGCGTGTGAGCCTGGGTTTGAGCAACA
AGTGGCTGTATGAGCGGAGCCGGCGTCTGTCAGCAAGCAACGGTAGCCTC
TGATTTGGACCACATTATTGGTCTTGTTTTGGGTCTCAGGGAAGAATAAG
AGACGATTCATGTAAACTCGTGTTTTCTACTAGCGGGGTGCTTCGGAACT
ACCTTTAGGCCGTATTTTGTTATGATGCTGCATGTTGCATGATGTACTTT
TAGAGAGGGTCCGATTCCTAAGAATAATTTTCGAA
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Coding sequence (CDS) from alignment at KZ851937.1:256284..257718-

>M747DRAFT_298640-T1 ID=M747DRAFT_298640-T1|Name=M747DRAFT_298640-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1770bp|location=Sequence derived from alignment at KZ851937.1:256284..257718- (Aspergillus niger ATCC 13496)
TTCGCTTTGGCTTCAGAACATCAGTCCGATCTCTACATATCCCGATCTTT
CATTGCTAGTCCTACGAGTCATCTTTGCTCTGAACATCCTGATTGCATTG
TACCCTCTCTTTCGTCCGAAAGACAATTTCTCCGATATTCCATTGACCCC
TACACAACGCTCGCTTTTGGGACTGGATCCCTCCGCCACACAGTCACTGA
CCCCGGGCACGACGTACGTTACTCCGCCCAGGTACCGACTTTCTGCGTCT
CGGAACGCCAGCCCAGCCAGCAGATCCGGTTCGCCCTTGTCAGCAAGTGC
TGGCGCTTCCGGGCACAGGCTATCGTCAGGACCTTCATTTTCGCCTTCTC
CGAGCCCGTTGTTGCACAAAGTGGTCACGAATGGGAGCAAGGAGAGCGGG
CGGAGGCCGAGCTTCGGATCTTCGTCTCCGCTCGGGCGCAGCTCATCCTT
CTCGCCCTTCAAAGAATCTTCCTTTAAGGAGTCTACGTTCAAAGACTCTA
CATCCACGTTCAGGGAGTCGACTATGTCGACATTTTCCGGCATGTCCAGC
ATTGCGCCTGCAACTCCTTCACCAGTAGGTGGCAAGCGTGTGAGCCTGGG
TTTGAGCAACAAGTGGCTGTATGAGCGGAGCCGGCGTCTGTCAGCAAGCA
ACGGTAGCCTCTGAATGGCGTCCCCCGCCCCTCCTTCTACCCCGAAAGCT
GCATCTGCACCTGCAGCAACACCCGATGGCTCTCAGACGCCTGGAAAGTG
GCGTCATCCTCATCTGAACGAGGTCGTCCGTCGACAGAATGCTGGTACAT
TCGGAGATCGCAATATAAATAAGCTTGTGTGGAACACGGCCGCTTTGTTC
GCGACCTGGGTGTTTGGAGATACCGTCAAGTCATATTCGCTTTGGCTTCA
GAACATCAGTCCGATCTCTACATATCCCGATCTTTCATTGCTAGTCCTAC
GAGTCATCTTTGCTCTGAACATCCTGATTGCATTGTACCCTCTCTTTCGT
CCGAAAGACAATTTCTCCGATATTCCATTGACCCCTACACAACGCTCGCT
TTTGGGACTGGATCCCTCCGCCACACAGTCACTGACCCCGGGCACGACGT
ACGTTACTCCGCCCAGGTACCGACTTTCTGCGTCTCGGAACGCCAGCCCA
GCCAGCAGATCCGGTTCGCCCTTGTCAGCAAGTGCTGGCGCTTCCGGGCA
CAGGCTATCGTCAGGACCTTCATTTTCGCCTTCTCCGAGCCCGTTGTTGC
ACAAAGTGGTCACGAATGGGAGCAAGGAGAGCGGGCGGAGGCCGAGCTTC
GGATCTTCGTCTCCGCTCGGGCGCAGCTCATCCTTCTCGCCCTTCAAAGA
ATCTTCCTTTAAGGAGTCTACGTTCAAAGACTCTACATCCACGTTCAGGG
AGTCGACTATGTCGACATTTTCCGGCATGTCCAGCATTGCGCCTGCAACT
CCTTCACCAGTAGGTGGCAAGCGTGTGAGCCTGGGTTTGAGCAACAAGTG
GCTGTATGAGCGGAGCCGGCGTCTGTCAGCAAGCAACGGTAGCCTCTGAA
TGGCGTCCCCCGCCCCTCCTTCTACCCCGAAAGCTGCATCTGCACCTGCA
GCAACACCCGATGGCTCTCAGACGCCTGGAAAGTGGCGTCATCCTCATCT
GAACGAGGTCGTCCGTCGACAGAATGCTGGTACATTCGGAGATCGCAATA
TAAATAAGCTTGTGTGGAACACGGCCGCTTTGTTCGCGACCTGGGTGTTT
GGAGATACCGTCAAGTCATA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298640M747DRAFT_298640Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298640-T1M747DRAFT_298640-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298640-T1.cdsM747DRAFT_298640-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298640-T1.utr3p1M747DRAFT_298640-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298640-T1.exon3M747DRAFT_298640-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298640-T1.exon2M747DRAFT_298640-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298640-T1.exon1M747DRAFT_298640-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298640-T1.utr5p2M747DRAFT_298640-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_298640-T1.utr5p1M747DRAFT_298640-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012578
DBxrefPFAM:PF08058
Productnuclear pore complex component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851937.1supercontigKZ851937.1:256284..257718 -
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