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M747DRAFT_298928-T1, M747DRAFT_298928-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298928-T1
Unique NameM747DRAFT_298928-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851942.1:79098..80697-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298928-T1 ID=M747DRAFT_298928-T1|Name=M747DRAFT_298928-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1600bp|location=Sequence derived from alignment at KZ851942.1:79098..80697- (Aspergillus niger ATCC 13496)
CAGGCGAGCTGCGCGCTGGCAAGTTGTTTGAGATCGTTTCTTGACTAAAT
AAAATCCAAATCGACGCCTCAGCAATCGCGTTTGTGCGAACCCCTCACCT
TGTGCCACCAAGGTCCTCAGCACCGGTTCAGCGCCGTTCATCGCCGGACC
CTTTTGACGTGGACCAGCCTTAGGGACCTTGGGGACGCCCAACTCTCACA
CTGAACAACTTGGCGCACATTTGAGAAACCAATTTAAGAGCGGGGGACCT
TGCAGACGAACCTCCAGCAATCTCAACCGAACTGCAGTTGACATTCCTCT
TCCACGTGCCTACACTTCCGCCATCCTCCTGTCACACCGATCCTGCACGC
CATTGGACCGGATACCTGTCAGACCTCGTTTCGATCATCCCTACCTTCTT
CGGGCGGGCCCGTGCTATTCTAAGCTGCTCCAGACCGTCTGCAGAGAACT
TGCCGGGTCGGATACATCCTACGGTGGAACATGGATTCTCTTCAGAGTCT
GGTTGCCAGAGATGCAACACCTGCTTGTGAGACGGGCAATGGATATGACG
GCCGTATGGGCCTGCGTATCTCGTCTATCTTTGTCATTCTCGTCGGTTCA
ACATGCGGGGCTCTCTTTCCCGTGATGGCCCGGAGTTTCAAGGACTCCAA
GATTGCAAAATGCGCCTTCTTCATCGCTAAATACTTTGGCTCCGGTGTTA
TCATTGCCACCGCATTTATTCACCTCCTTGCCCCAGCAGAAGAGGCCTTG
ACCGACGATTGCCTCACCGGCCCAATCACAGAATACTCTTGGGTTGAGGG
AATCGTCCTAATGACCATTGTGGTACTGTTCTTCGTGGAGCTAATGGTCA
TGCGCTTTGCCCGTTTCGGCCACGGCCACTCTCACGACGAGGATGATGAC
CATCACGTGAAGATTGAGCATGCCGCTGCCTCTCCTGCTGAGTCGGTTGA
CATGAAGACCCATATGCCGGGGGAAGACCATCTCGGGCATTCCCGCGAAC
ACCATGATATGGAGCTCGGGAAGCAGCATTCTGATCTGGAGGAGTACGTC
GCTCAATTGACCTCCATCTTCATTCTCGAGTTTGGAATCATCTTCCACTC
CGTCTTCATTGGGTTGACCCTGGCGGTCACCGGCTCCGAGTTTGTGACCC
TCTACGTTGTCCTCGTCTTCCACCAAACCTTCGAAGGCCTGGGTCTGGGA
TCCCGGTTAGCTACCGTTCCCTGGCCACGTTCCAAGCGATGGACCCCTTA
TTTCCTGGGACTTGGATACGGTATCTCCACGCCTATTGCGATTGCGATCG
GTCTAGGCGTGCGCGACTCTTATGCATCTGACGGCGCCACGACGTTGATC
GTCAGTGGTGTCTTTGACTCGATTTCGGCCGGCATTCTGATCTACACAGC
CCTGGTGGAGCTACTGGCCCACGAGTTCATGTTCAGCACTTCGATGCGAA
AGGCACCGATACAGATTGTTCTCGCGGCTTTCGGTCTGCTATGTCTGGGT
GCTTTGCTAATGGCCCTGCTGGGTAAATGGGCTTAAAAATATTAAATAGA
TCTTGTTCTTTGTACATATAGATACCATTTATGACAGTATATGATGACAG
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Coding sequence (CDS) from alignment at KZ851942.1:79098..80697-

>M747DRAFT_298928-T1 ID=M747DRAFT_298928-T1|Name=M747DRAFT_298928-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1056bp|location=Sequence derived from alignment at KZ851942.1:79098..80697- (Aspergillus niger ATCC 13496)
ATGGATTCTCTTCAGAGTCTGGTTGCCAGAGATGCAACACCTGCTTGTGA
GACGGGCAATGGATATGACGGCCGTATGGGCCTGCGTATCTCGTCTATCT
TTGTCATTCTCGTCGGTTCAACATGCGGGGCTCTCTTTCCCGTGATGGCC
CGGAGTTTCAAGGACTCCAAGATTGCAAAATGCGCCTTCTTCATCGCTAA
ATACTTTGGCTCCGGTGTTATCATTGCCACCGCATTTATTCACCTCCTTG
CCCCAGCAGAAGAGGCCTTGACCGACGATTGCCTCACCGGCCCAATCACA
GAATACTCTTGGGTTGAGGGAATCGTCCTAATGACCATTGTGGTACTGTT
CTTCGTGGAGCTAATGGTCATGCGCTTTGCCCGTTTCGGCCACGGCCACT
CTCACGACGAGGATGATGACCATCACGTGAAGATTGAGCATGCCGCTGCC
TCTCCTGCTGAGTCGGTTGACATGAAGACCCATATGCCGGGGGAAGACCA
TCTCGGGCATTCCCGCGAACACCATGATATGGAGCTCGGGAAGCAGCATT
CTGATCTGGAGGAGTACGTCGCTCAATTGACCTCCATCTTCATTCTCGAG
TTTGGAATCATCTTCCACTCCGTCTTCATTGGGTTGACCCTGGCGGTCAC
CGGCTCCGAGTTTGTGACCCTCTACGTTGTCCTCGTCTTCCACCAAACCT
TCGAAGGCCTGGGTCTGGGATCCCGGTTAGCTACCGTTCCCTGGCCACGT
TCCAAGCGATGGACCCCTTATTTCCTGGGACTTGGATACGGTATCTCCAC
GCCTATTGCGATTGCGATCGGTCTAGGCGTGCGCGACTCTTATGCATCTG
ACGGCGCCACGACGTTGATCGTCAGTGGTGTCTTTGACTCGATTTCGGCC
GGCATTCTGATCTACACAGCCCTGGTGGAGCTACTGGCCCACGAGTTCAT
GTTCAGCACTTCGATGCGAAAGGCACCGATACAGATTGTTCTCGCGGCTT
TCGGTCTGCTATGTCTGGGTGCTTTGCTAATGGCCCTGCTGGGTAAATGG
GCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0030001metal ion transport
GO:0071577zinc ion transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO:0005385zinc ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298928M747DRAFT_298928Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298928-T1.cdsM747DRAFT_298928-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298928-T1.utr3p1M747DRAFT_298928-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298928-T1.exon1M747DRAFT_298928-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298928-T1.utr5p1M747DRAFT_298928-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298928-T1M747DRAFT_298928-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003689
DBxrefInterPro:IPR004698
DBxrefPFAM:PF02535
ProductZIP zinc/iron transport family
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851942.1supercontigKZ851942.1:79098..80697 -
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