You are here

Home

M747DRAFT_299087-T1, M747DRAFT_299087-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299087-T1
Unique NameM747DRAFT_299087-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851944.1:21051..22928-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299087-T1 ID=M747DRAFT_299087-T1|Name=M747DRAFT_299087-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1878bp|location=Sequence derived from alignment at KZ851944.1:21051..22928- (Aspergillus niger ATCC 13496)
CCCGCCATGTCCACCATGAACGAAGTCAGCCCCATTGAACCCGAGGCTCC
TAAATGGGACAAGGTATGGATCTCTCACGACTAGACGTCGACTCTCGCTG
GGGTTCCTCATCCCCCCCGCTCACTCCTCCGCCAGGCCTTGCAGAATCAA
TCCGCCGATAAACTCTCCAAGCCGCATACGAAGCGCCGCAAGAAGTCCCC
GCTCCGTCGCTTCAAGGATGTGTGTCTCAAGCATACTTGGCTTTTGCCTC
TCCTCATGCTCATCGTTCTTCTGTCGCTGTACGCGATCAACCCGACGGAA
TCCAATCCCATGCATAGCGCCATCTTTTTGTCTTATCCTCTGCCTCCAAA
GGTCCCCGGTGGTCCGATCATGTATGGAAAGGGCCCCAAGGATATTACCT
TTGTCTCATTCTACACGATTGTTCTGTCGTTTACTCGAGAATTCCTGATG
CAGCGCCTTATTCGGCCTTTCGCTGTATACTGCGGGATCCGAGGCCGGGG
CAAGACTGCCCGTTTCATGGAGCAGGTGTACACCGCGATCTACTTTGCCA
TCTTCGGTCCATTCGGCCTGTACGTCATGAGCCGGTCGGATATCTGGTAC
TTCAACACTACGGCCATGTTCGAAGGGTTCCCCCACCGGGAGCACGAAGG
GTTGTTCAAGGCATTCTATCTGCTTGAGGCTAGTTACTGGGCTCAGCAGG
CGATTGTCCTGATGTTGCAGTTGGAGAAGCCGCGCAAGGATTTCAAGGAG
CTGGTTGGACACCACATCATCACTCTGGCTCTGATCGGATTGAGTTATCG
CTTCCACTTCACCTACATGGGTATCGCCGTCTACATCACGCACGACATCT
CTGACTTCTTCCTTGCTGTGAGTGATCCGATTCGAAGTCCACACTTTTTC
TGTTCTTCATGCTGATCGAGTTGCCGTGCAGACCTCCAAGACCTTGAACT
ACCTCGACCACATCATCACTGTCCCTTACTTTGGTATGTTTGTGGGCATG
TGGATCTACCTTCGCCACTATCTGAATCTTAAGATCCTCTGGGCTGTGTT
GACCGAGTTCCGCACGGTCGGACCTTTTGAGCTGAACTGGGAGACTCAAC
AGTACAAGTGCTGGATCAGTCAGTACATCACTTTTGCCCTGTTGGCCAGT
CTGCAAGCCGTGAACCTCTTCTGGCTCTTCCTGATCCTGCGCATCCTGAA
GAACTACATTTTCAACAGCATCAAGAAGGACGAGAGAAGCGAAGATGAAG
ACTCGGAGGAAGAGGAAGTCCCTGTGCCGGACACGGACACCCACGCGACC
CTTGCGACCGGCGTCGAGGGAGCCACCGTGACTGCACGTGGCAAGGAGAA
CCAGACTCCGCAGGTGCTGGTCAACGGCAAGCCCGTCAACTCCAAGAACT
GAACACAGTTTCAGGATCAGGACTGACTCCCTTCCTGAGGAGATCTATGT
ATCTCCAATCCACCATCCACTACCCACGTGGACTGTATGAATTTTTCATG
GGGTTTGTTTATATTGTATGAACGGGAACATTTACGACAGCCTTGTTTGG
ACCTTGTTCAAGACAGAATTTTAACATTTTTTTCCCCCAACCATTACGGA
GTACTATTATTTATTAACATTTTTTGTCCGGTGCTTATGGTCTAATCGGC
ATCTCATGTATTCATTTCATTTCTTTTTTTTTTTCCCTTTGCCTTTCCAT
ATTAGTCATTCATACGAAAGCATCATGCCCCAGGCTGCAGCATGCCAGGA
GCGAGACGGGACAGGGTGGATCTTATAAACTTAACGAGTGTTTTTCATCA
TCAATCCATGATTTACCGGGGTTCCAGGCCCCCAAATCTGTGTCATGGAC
ATAATATAATAATAGACCATTGTGCTGA
back to top

Coding sequence (CDS) from alignment at KZ851944.1:21051..22928-

>M747DRAFT_299087-T1 ID=M747DRAFT_299087-T1|Name=M747DRAFT_299087-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3780bp|location=Sequence derived from alignment at KZ851944.1:21051..22928- (Aspergillus niger ATCC 13496)
ACCTCCAAGACCTTGAACTACCTCGACCACATCATCACTGTCCCTTACTT
TGGTATGTTTGTGGGCATGTGGATCTACCTTCGCCACTATCTGAATCTTA
AGATCCTCTGGGCTGTGTTGACCGAGTTCCGCACGGTCGGACCTTTTGAG
CTGAACTGGGAGACTCAACAGTACAAGTGCTGGATCAGTCAGTACATCAC
TTTTGCCCTGTTGGCCAGTCTGCAAGCCGTGAACCTCTTCTGGCTCTTCC
TGATCCTGCGCATCCTGAAGAACTACATTTTCAACAGCATCAAGAAGGAC
GAGAGAAGCGAAGATGAAGACTCGGAGGAAGAGGAAGTCCCTGTGCCGGA
CACGGACACCCACGCGACCCTTGCGACCGGCGTCGAGGGAGCCACCGTGA
CTGCACGTGGCAAGGAGAACCAGACTCCGCAGGTGCTGGTCAACGGCAAG
CCCGTCAACTCCAAGAACTGAGCCTTGCAGAATCAATCCGCCGATAAACT
CTCCAAGCCGCATACGAAGCGCCGCAAGAAGTCCCCGCTCCGTCGCTTCA
AGGATGTGTGTCTCAAGCATACTTGGCTTTTGCCTCTCCTCATGCTCATC
GTTCTTCTGTCGCTGTACGCGATCAACCCGACGGAATCCAATCCCATGCA
TAGCGCCATCTTTTTGTCTTATCCTCTGCCTCCAAAGGTCCCCGGTGGTC
CGATCATGTATGGAAAGGGCCCCAAGGATATTACCTTTGTCTCATTCTAC
ACGATTGTTCTGTCGTTTACTCGAGAATTCCTGATGCAGCGCCTTATTCG
GCCTTTCGCTGTATACTGCGGGATCCGAGGCCGGGGCAAGACTGCCCGTT
TCATGGAGCAGGTGTACACCGCGATCTACTTTGCCATCTTCGGTCCATTC
GGCCTGTACGTCATGAGCCGGTCGGATATCTGGTACTTCAACACTACGGC
CATGTTCGAAGGGTTCCCCCACCGGGAGCACGAAGGGTTGTTCAAGGCAT
TCTATCTGCTTGAGGCTAGTTACTGGGCTCAGCAGGCGATTGTCCTGATG
TTGCAGTTGGAGAAGCCGCGCAAGGATTTCAAGGAGCTGGTTGGACACCA
CATCATCACTCTGGCTCTGATCGGATTGAGTTATCGCTTCCACTTCACCT
ACATGGGTATCGCCGTCTACATCACGCACGACATCTCTGACTTCTTCCTT
GCTATGTCCACCATGAACGAAGTCAGCCCCATTGAACCCGAGGCTCCTAA
ATGGGACAAGACCTCCAAGACCTTGAACTACCTCGACCACATCATCACTG
TCCCTTACTTTGGTATGTTTGTGGGCATGTGGATCTACCTTCGCCACTAT
CTGAATCTTAAGATCCTCTGGGCTGTGTTGACCGAGTTCCGCACGGTCGG
ACCTTTTGAGCTGAACTGGGAGACTCAACAGTACAAGTGCTGGATCAGTC
AGTACATCACTTTTGCCCTGTTGGCCAGTCTGCAAGCCGTGAACCTCTTC
TGGCTCTTCCTGATCCTGCGCATCCTGAAGAACTACATTTTCAACAGCAT
CAAGAAGGACGAGAGAAGCGAAGATGAAGACTCGGAGGAAGAGGAAGTCC
CTGTGCCGGACACGGACACCCACGCGACCCTTGCGACCGGCGTCGAGGGA
GCCACCGTGACTGCACGTGGCAAGGAGAACCAGACTCCGCAGGTGCTGGT
CAACGGCAAGCCCGTCAACTCCAAGAACTGAGCCTTGCAGAATCAATCCG
CCGATAAACTCTCCAAGCCGCATACGAAGCGCCGCAAGAAGTCCCCGCTC
CGTCGCTTCAAGGATGTGTGTCTCAAGCATACTTGGCTTTTGCCTCTCCT
CATGCTCATCGTTCTTCTGTCGCTGTACGCGATCAACCCGACGGAATCCA
ATCCCATGCATAGCGCCATCTTTTTGTCTTATCCTCTGCCTCCAAAGGTC
CCCGGTGGTCCGATCATGTATGGAAAGGGCCCCAAGGATATTACCTTTGT
CTCATTCTACACGATTGTTCTGTCGTTTACTCGAGAATTCCTGATGCAGC
GCCTTATTCGGCCTTTCGCTGTATACTGCGGGATCCGAGGCCGGGGCAAG
ACTGCCCGTTTCATGGAGCAGGTGTACACCGCGATCTACTTTGCCATCTT
CGGTCCATTCGGCCTGTACGTCATGAGCCGGTCGGATATCTGGTACTTCA
ACACTACGGCCATGTTCGAAGGGTTCCCCCACCGGGAGCACGAAGGGTTG
TTCAAGGCATTCTATCTGCTTGAGGCTAGTTACTGGGCTCAGCAGGCGAT
TGTCCTGATGTTGCAGTTGGAGAAGCCGCGCAAGGATTTCAAGGAGCTGG
TTGGACACCACATCATCACTCTGGCTCTGATCGGATTGAGTTATCGCTTC
CACTTCACCTACATGGGTATCGCCGTCTACATCACGCACGACATCTCTGA
CTTCTTCCTTGCTATGTCCACCATGAACGAAGTCAGCCCCATTGAACCCG
AGGCTCCTAAATGGGACAAGACCTCCAAGACCTTGAACTACCTCGACCAC
ATCATCACTGTCCCTTACTTTGGTATGTTTGTGGGCATGTGGATCTACCT
TCGCCACTATCTGAATCTTAAGATCCTCTGGGCTGTGTTGACCGAGTTCC
GCACGGTCGGACCTTTTGAGCTGAACTGGGAGACTCAACAGTACAAGTGC
TGGATCAGTCAGTACATCACTTTTGCCCTGTTGGCCAGTCTGCAAGCCGT
GAACCTCTTCTGGCTCTTCCTGATCCTGCGCATCCTGAAGAACTACATTT
TCAACAGCATCAAGAAGGACGAGAGAAGCGAAGATGAAGACTCGGAGGAA
GAGGAAGTCCCTGTGCCGGACACGGACACCCACGCGACCCTTGCGACCGG
CGTCGAGGGAGCCACCGTGACTGCACGTGGCAAGGAGAACCAGACTCCGC
AGGTGCTGGTCAACGGCAAGCCCGTCAACTCCAAGAACTGAGCCTTGCAG
AATCAATCCGCCGATAAACTCTCCAAGCCGCATACGAAGCGCCGCAAGAA
GTCCCCGCTCCGTCGCTTCAAGGATGTGTGTCTCAAGCATACTTGGCTTT
TGCCTCTCCTCATGCTCATCGTTCTTCTGTCGCTGTACGCGATCAACCCG
ACGGAATCCAATCCCATGCATAGCGCCATCTTTTTGTCTTATCCTCTGCC
TCCAAAGGTCCCCGGTGGTCCGATCATGTATGGAAAGGGCCCCAAGGATA
TTACCTTTGTCTCATTCTACACGATTGTTCTGTCGTTTACTCGAGAATTC
CTGATGCAGCGCCTTATTCGGCCTTTCGCTGTATACTGCGGGATCCGAGG
CCGGGGCAAGACTGCCCGTTTCATGGAGCAGGTGTACACCGCGATCTACT
TTGCCATCTTCGGTCCATTCGGCCTGTACGTCATGAGCCGGTCGGATATC
TGGTACTTCAACACTACGGCCATGTTCGAAGGGTTCCCCCACCGGGAGCA
CGAAGGGTTGTTCAAGGCATTCTATCTGCTTGAGGCTAGTTACTGGGCTC
AGCAGGCGATTGTCCTGATGTTGCAGTTGGAGAAGCCGCGCAAGGATTTC
AAGGAGCTGGTTGGACACCACATCATCACTCTGGCTCTGATCGGATTGAG
TTATCGCTTCCACTTCACCTACATGGGTATCGCCGTCTACATCACGCACG
ACATCTCTGACTTCTTCCTTGCTATGTCCACCATGAACGAAGTCAGCCCC
ATTGAACCCGAGGCTCCTAAATGGGACAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_299087M747DRAFT_299087Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299087-T1M747DRAFT_299087-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299087-T1.cdsM747DRAFT_299087-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299087-T1.utr3p1M747DRAFT_299087-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299087-T1.exon3M747DRAFT_299087-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_299087-T1.exon2M747DRAFT_299087-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_299087-T1.exon1M747DRAFT_299087-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299087-T1.utr5p1M747DRAFT_299087-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016439
DBxrefInterPro:IPR013599
DBxrefInterPro:IPR006634
DBxrefPFAM:PF03798
DBxrefPFAM:PF08390
Productlongevity assurance proteins LAG1/LAC1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851944.1supercontigKZ851944.1:21051..22928 -
Powered by Drupal