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M747DRAFT_299168-T1, M747DRAFT_299168-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299168-T1
Unique NameM747DRAFT_299168-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851945.1:64571..66481+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299168-T1 ID=M747DRAFT_299168-T1|Name=M747DRAFT_299168-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1911bp|location=Sequence derived from alignment at KZ851945.1:64571..66481+ (Aspergillus niger ATCC 13496)
CTATCGTTCATTTCGACATTGCACCTCTGGGCCTCCCAGAATGATTTTCG
GCCTTCCCGGATAATAAATTTGATGGTCATCTACTCGCCTCAAATTGCAG
GAAATACCTGGCCCACTCGTTGACGAACCGACGACGTTACACCCTCCCGC
CCACCCGATACCTCCTACCTCCGTTCTTTTACCTCCACCTCAACACTCAC
GCCCACCATGTCCGTTTGGAACCCCGATAATATTCGCGATGTTGCCGAGT
CGGTCGGTGTCGTGAACCTCAGCAATGATGTCACTGAGAACCTTGCCCGC
GACGTCGAGTACCGCATCGCGCAGGTCCTGGAAGAGGCCCTCAAATTCAT
GCGCCACAGTCGACGCACGCTACTCACGACACAAGATGTCGCGCAGGCGC
TGCGCGTGCTGGATGTGGAGCCACTGTACGGATACGAGTCTACAAGGCCT
TTGCGGTTCGGAGAGGCGTCACTGGGCCCTGGTCAGCCGTTGTTCTACGT
GGAGGATGAAGAAGTGGACTTTGAGAAGTTGATAAATGCGCCGTTGCCCA
GGGTTCCTCGCGAGATCTCTTTCACAGGTAAACTTGGCCCTGCTGCTCTA
TGGAAATATTTACAATGAAGTGTTGGCATGCTGACTCCATTAAGCCCATT
GGTTGGCGGTTGAAGGTGTACAACCGTCCATCCCTCAGAATCCCACGGCG
GCCGACTCGAGAAACATGGAACTGATGTCCAAGGGACCCAACGCAAGCTC
TACATTGGCGGCCATGAGTGGAGGAGGAAATGTCTCCGTCAAGCCTCTGG
TGAAGCATGTGCTTTCCAAGGAGCTCCAGCTATACTTCGAGAAGGTCTGC
AACGCCTTCCTGGACGAGTCCAGTGAGGAATACAGGACGTCGGGTTATGC
CAGTCTCCGAGAAGACCCCGGACTACACCAGCTGGTGCCATATTTCGTGC
AATTCATTTCGGAGAAGGTGACGCATGGGCTGAAGGACGTCTTTGTCCTG
ACGCAGGTGATGCACATGGCCGAGGCTCTGGTACAGAACAAGTCTCTCTA
CGTGGACCCATATGTGAGTCATGATTGTCACATGAACAACGCAGATTACA
TTCCACTGACTCCTGATAGATCGCCTCACTTGTTCCACCTATTCTGACGT
GCCTGATCGGTCGACAACTCGGGGGCAGTGCTGAACTGACGGAGCAATTT
GCCCTGCGCGACCTTGCCGCATCGCTTCTGGGCCTCATCGCCAAGAAATA
TTCCAATTCGTCGCACACCCTCAAGCCACGACTGGCCCGGTCGTGCCTGA
AGACGTTCCTGGACCCGTCCAAACCCTTTGGGGCGCACTATGGCGCGGTG
ATCGGACTACATGCGGTTGGCGGTGCAGAGGCGGTGCGGGTGCTGATCAT
GCCTAATCTGCCGACGTACGGCAACCTGCTCAAGGATGGCATGGCGGAGG
AGAGTCCACGCCGGCCGGAGGCAGAGCGGGTGCTTAGCGTGCTGCTGGGG
GTGCTGAACACGCTACGGGAGGGCCGGATGGCACTGGCCAACGGTCATGG
CGGGATGGTGACGGATGGTCTTCGAGATCGGCTGAGTCAGAAAGTGGGTG
AGTTCCTGGCCGCGAAGATTAGTGACGCGGGGGAAGTTGACCTCGCTCAT
GCCATTGTGGAGTCGTCCTCCTGATTCTGCTGCATTTCTCTCTCTACAAC
TTGAAGTAGCATCTCATTCTGTATCTACTTTGGATGTACATCTTTAGGGG
CAGCGGGTGAAGAGCCATGCGTGCTTTCTTTCATTTTTCTTAGTTTGAGT
GTTTGTTGCTGGGCATGGACAGAATTCGGCGTTTGGGGCAAAGGGTGTTT
TAGAAGGAGGGAATCAGGACTATTCTTGAATGCTAGCTAGCGAATTGTAC
CTCTGCATAAT
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Coding sequence (CDS) from alignment at KZ851945.1:64571..66481+

>M747DRAFT_299168-T1 ID=M747DRAFT_299168-T1|Name=M747DRAFT_299168-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4032bp|location=Sequence derived from alignment at KZ851945.1:64571..66481+ (Aspergillus niger ATCC 13496)
ATGTCCGTTTGGAACCCCGATAATATTCGCGATGTTGCCGAGTCGGTCGG
TGTCGTGAACCTCAGCAATGATGTCACTGAGAACCTTGCCCGCGACGTCG
AGTACCGCATCGCGCAGGTCCTGGAAGAGGCCCTCAAATTCATGCGCCAC
AGTCGACGCACGCTACTCACGACACAAGATGTCGCGCAGGCGCTGCGCGT
GCTGGATGTGGAGCCACTGTACGGATACGAGTCTACAAGGCCTTTGCGGT
TCGGAGAGGCGTCACTGGGCCCTGGTCAGCCGTTGTTCTACGTGGAGGAT
GAAGAAGTGGACTTTGAGAAGTTGATAAATGCGCCGTTGCCCAGGGTTCC
TCGCGAGATCTCTTTCACAGCCCATTGGTTGGCGGTTGAAGGTGTACAAC
CGTCCATCCCTCAGAATCCCACGGCGGCCGACTCGAGAAACATGGAACTG
ATGTCCAAGGGACCCAACGCAAGCTCTACATTGGCGGCCATGAGTGGAGG
AGGAAATGTCTCCGTCAAGCCTCTGGTGAAGCATGTGCTTTCCAAGGAGC
TCCAGCTATACTTCGAGAAGGTCTGCAACGCCTTCCTGGACGAGTCCAGT
GAGGAATACAGGACGTCGGGTTATGCCAGTCTCCGAGAAGACCCCGGACT
ACACCAGCTGGTGCCATATTTCGTGCAATTCATTTCGGAGAAGGTGACGC
ATGGGCTGAAGGACGTCTTTGTCCTGACGCAGGTGATGCACATGGCCGAG
GCTCTGGTACAGAACAAGTCTCTCTACGTGGACCCATATATCGCCTCACT
TGTTCCACCTATTCTGACGTGCCTGATCGGTCGACAACTCGGGGGCAGTG
CTGAACTGACGGAGCAATTTGCCCTGCGCGACCTTGCCGCATCGCTTCTG
GGCCTCATCGCCAAGAAATATTCCAATTCGTCGCACACCCTCAAGCCACG
ACTGGCCCGGTCGTGCCTGAAGACGTTCCTGGACCCGTCCAAACCCTTTG
GGGCGCACTATGGCGCGGTGATCGGACTACATGCGGTTGGCGGTGCAGAG
GCGGTGCGGGTGCTGATCATGCCTAATCTGCCGACGTACGGCAACCTGCT
CAAGGATGGCATGGCGGAGGAGAGTCCACGCCGGCCGGAGGCAGAGCGGG
TGCTTAGCGTGCTGCTGGGGGTGCTGAACACGCTACGGGAGGGCCGGATG
GCACTGGCCAACGGTCATGGCGGGATGGTGACGGATGGTCTTCGAGATCG
GCTGAGTCAGAAAGTGGGTGAGTTCCTGGCCGCGAAGATTAGTGACGCGG
GGGAAGTTGACCTCGCTCATGCCATTGTGGAGTCGTCCTCCTGAATGTCC
GTTTGGAACCCCGATAATATTCGCGATGTTGCCGAGTCGGTCGGTGTCGT
GAACCTCAGCAATGATGTCACTGAGAACCTTGCCCGCGACGTCGAGTACC
GCATCGCGCAGGTCCTGGAAGAGGCCCTCAAATTCATGCGCCACAGTCGA
CGCACGCTACTCACGACACAAGATGTCGCGCAGGCGCTGCGCGTGCTGGA
TGTGGAGCCACTGTACGGATACGAGTCTACAAGGCCTTTGCGGTTCGGAG
AGGCGTCACTGGGCCCTGGTCAGCCGTTGTTCTACGTGGAGGATGAAGAA
GTGGACTTTGAGAAGTTGATAAATGCGCCGTTGCCCAGGGTTCCTCGCGA
GATCTCTTTCACAGCCCATTGGTTGGCGGTTGAAGGTGTACAACCGTCCA
TCCCTCAGAATCCCACGGCGGCCGACTCGAGAAACATGGAACTGATGTCC
AAGGGACCCAACGCAAGCTCTACATTGGCGGCCATGAGTGGAGGAGGAAA
TGTCTCCGTCAAGCCTCTGGTGAAGCATGTGCTTTCCAAGGAGCTCCAGC
TATACTTCGAGAAGGTCTGCAACGCCTTCCTGGACGAGTCCAGTGAGGAA
TACAGGACGTCGGGTTATGCCAGTCTCCGAGAAGACCCCGGACTACACCA
GCTGGTGCCATATTTCGTGCAATTCATTTCGGAGAAGGTGACGCATGGGC
TGAAGGACGTCTTTGTCCTGACGCAGGTGATGCACATGGCCGAGGCTCTG
GTACAGAACAAGTCTCTCTACGTGGACCCATATATCGCCTCACTTGTTCC
ACCTATTCTGACGTGCCTGATCGGTCGACAACTCGGGGGCAGTGCTGAAC
TGACGGAGCAATTTGCCCTGCGCGACCTTGCCGCATCGCTTCTGGGCCTC
ATCGCCAAGAAATATTCCAATTCGTCGCACACCCTCAAGCCACGACTGGC
CCGGTCGTGCCTGAAGACGTTCCTGGACCCGTCCAAACCCTTTGGGGCGC
ACTATGGCGCGGTGATCGGACTACATGCGGTTGGCGGTGCAGAGGCGGTG
CGGGTGCTGATCATGCCTAATCTGCCGACGTACGGCAACCTGCTCAAGGA
TGGCATGGCGGAGGAGAGTCCACGCCGGCCGGAGGCAGAGCGGGTGCTTA
GCGTGCTGCTGGGGGTGCTGAACACGCTACGGGAGGGCCGGATGGCACTG
GCCAACGGTCATGGCGGGATGGTGACGGATGGTCTTCGAGATCGGCTGAG
TCAGAAAGTGGGTGAGTTCCTGGCCGCGAAGATTAGTGACGCGGGGGAAG
TTGACCTCGCTCATGCCATTGTGGAGTCGTCCTCCTGAATGTCCGTTTGG
AACCCCGATAATATTCGCGATGTTGCCGAGTCGGTCGGTGTCGTGAACCT
CAGCAATGATGTCACTGAGAACCTTGCCCGCGACGTCGAGTACCGCATCG
CGCAGGTCCTGGAAGAGGCCCTCAAATTCATGCGCCACAGTCGACGCACG
CTACTCACGACACAAGATGTCGCGCAGGCGCTGCGCGTGCTGGATGTGGA
GCCACTGTACGGATACGAGTCTACAAGGCCTTTGCGGTTCGGAGAGGCGT
CACTGGGCCCTGGTCAGCCGTTGTTCTACGTGGAGGATGAAGAAGTGGAC
TTTGAGAAGTTGATAAATGCGCCGTTGCCCAGGGTTCCTCGCGAGATCTC
TTTCACAGCCCATTGGTTGGCGGTTGAAGGTGTACAACCGTCCATCCCTC
AGAATCCCACGGCGGCCGACTCGAGAAACATGGAACTGATGTCCAAGGGA
CCCAACGCAAGCTCTACATTGGCGGCCATGAGTGGAGGAGGAAATGTCTC
CGTCAAGCCTCTGGTGAAGCATGTGCTTTCCAAGGAGCTCCAGCTATACT
TCGAGAAGGTCTGCAACGCCTTCCTGGACGAGTCCAGTGAGGAATACAGG
ACGTCGGGTTATGCCAGTCTCCGAGAAGACCCCGGACTACACCAGCTGGT
GCCATATTTCGTGCAATTCATTTCGGAGAAGGTGACGCATGGGCTGAAGG
ACGTCTTTGTCCTGACGCAGGTGATGCACATGGCCGAGGCTCTGGTACAG
AACAAGTCTCTCTACGTGGACCCATATATCGCCTCACTTGTTCCACCTAT
TCTGACGTGCCTGATCGGTCGACAACTCGGGGGCAGTGCTGAACTGACGG
AGCAATTTGCCCTGCGCGACCTTGCCGCATCGCTTCTGGGCCTCATCGCC
AAGAAATATTCCAATTCGTCGCACACCCTCAAGCCACGACTGGCCCGGTC
GTGCCTGAAGACGTTCCTGGACCCGTCCAAACCCTTTGGGGCGCACTATG
GCGCGGTGATCGGACTACATGCGGTTGGCGGTGCAGAGGCGGTGCGGGTG
CTGATCATGCCTAATCTGCCGACGTACGGCAACCTGCTCAAGGATGGCAT
GGCGGAGGAGAGTCCACGCCGGCCGGAGGCAGAGCGGGTGCTTAGCGTGC
TGCTGGGGGTGCTGAACACGCTACGGGAGGGCCGGATGGCACTGGCCAAC
GGTCATGGCGGGATGGTGACGGATGGTCTTCGAGATCGGCTGAGTCAGAA
AGTGGGTGAGTTCCTGGCCGCGAAGATTAGTGACGCGGGGGAAGTTGACC
TCGCTCATGCCATTGTGGAGTCGTCCTCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
GO:0006352DNA-templated transcription, initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_299168M747DRAFT_299168Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299168-T1M747DRAFT_299168-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299168-T1.utr5p1M747DRAFT_299168-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299168-T1.exon1M747DRAFT_299168-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_299168-T1.exon2M747DRAFT_299168-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_299168-T1.exon3M747DRAFT_299168-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299168-T1.cdsM747DRAFT_299168-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299168-T1.utr3p1M747DRAFT_299168-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519451.1
NoteBUSCO:EOG09260THV
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR011442
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR004823
DBxrefPFAM:PF07571
DBxrefPFAM:PF02969
Producttranscription initiation factor TFIID complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851945.1supercontigKZ851945.1:64571..66481 +
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