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M747DRAFT_299176-T1, M747DRAFT_299176-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299176-T1
Unique NameM747DRAFT_299176-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851945.1:81466..82872+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299176-T1 ID=M747DRAFT_299176-T1|Name=M747DRAFT_299176-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1407bp|location=Sequence derived from alignment at KZ851945.1:81466..82872+ (Aspergillus niger ATCC 13496)
CCAGAACACCTCGACCTTCACCACTTCTTCAACCCAACCAGATACAAATA
CATAGCAGAGCGGATACTCAAGATGCCTCTCGACGGGGTGAAGAATGTTG
TGCTGGTGAGTATTACTCTTCATTTACCTGAGCTCCAGCTCCAAACATCA
TTGCGACAACCCCTCCTCTCTTATCGATAACACCGCGCAACTGCGCACAG
GATGGAAGGATGGCCACACCTACACATACAATGCGCGCACATCCTATCTA
CCTCTATCCATCTATACACCTTCCAATACATTGTCCAGAGAGAAGCTAAC
AAGCTATCTCCCAGGTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCAGC
GTAACCCTGCAACTCGCCCTCGCGCTCACCCTGCAAGGCAAATCCGTTGG
TATCCTGGACATCGATCTCACCGGCCCTTCAATCCCACGATTAGTCGGTC
TCGAAGACGCAAAAATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCC
GTTCACCCTTCCACCATCATCACCACACCCAATGCCTCCTCCACCTCACA
ACCAGATACAACAACAACGGCAACAGAAACAGAAGGTGGAAGCGCCATAA
AACACGGCTCTCTCCGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCCGG
TCCGATGCCGTAATCTGGCGCGGGCCCAAAAAGACAGCCATGATCCGCCA
ATTCCTCTCCGATGTGCTGTGGAATGAAACTGATTACTTGCTTATTGATA
CGCCTCCCGGAACTAGTGATGAGCATATTGCTCTTGCGGAGCAGCTCTTG
ACGCTTTGTACGATCGATGCTTCCTCTGCAACTGGAATGCCTCGACTGGC
TGGTGCGGTACTGGTCACTACACCACAGGCGGTAGCAACGTCTGATGTAC
GGAAGGAGGTGAATTTCTGCGTTAAGACGAGGATTCCGATGCTGGGGGTG
GTGGAGAATATGTCTGGTTATACGTGTCCGTGCTGTGGGGAGGTGACGAA
CCTGTTCTCGAGTGGTGGGGGGCAGGTTCTGGCAGAAGAGATGGGTGTAA
GGTTTTTGGGAAAGGTGCCCGTTGACGTTGGGTTTGGGGAGTTGGTGGAG
GGGAAGATTGGTGGGGAGGAGGATAGTGAGGATGAGGATGAGGATACTAA
TGGGGAGAAGAAGGAGGAAGAAGAGAAGGATGAGAGGCCGCTAGTGGAAA
GGTATCGGGAATGTTGGTCGTATGCGCGGTTCGAGGACTTTTCGAAGACG
TTGATTGCGGAGATTGAGGGGCAATGATGGAGTAGTATATATAGGGGGTT
ACTGTTAGAGCATCTGTCATGGGTGGCGTCTTCTTGGCATGGATGTAGAG
TGATACGAGATCATGATTCACTATGAGAAAAGTACTATTGCTCATTGATG
TGGGGTG
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Coding sequence (CDS) from alignment at KZ851945.1:81466..82872+

>M747DRAFT_299176-T1 ID=M747DRAFT_299176-T1|Name=M747DRAFT_299176-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1992bp|location=Sequence derived from alignment at KZ851945.1:81466..82872+ (Aspergillus niger ATCC 13496)
ATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTCCTCTCGGGCAAAGG
CGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCGCGCTCACCC
TGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACCGGCCCTTCA
ATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCAAGCGCCAGG
CGGTTGGCTTCCTGTTCCCGTTCACCCTTCCACCATCATCACCACACCCA
ATGCCTCCTCCACCTCACAACCAGATACAACAACAACGGCAACAGAAACA
GAAGGTGGAAGCGCCATAAAACACGGCTCTCTCCGCTGCATGTCCCTCGG
CTTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGCGCGGGCCCAAAA
AGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAACT
GATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGAGCATATTGC
TCTTGCGGAGCAGCTCTTGACGCTTTGTACGATCGATGCTTCCTCTGCAA
CTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAGGCG
GTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGTTAAGACGAG
GATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTTATACGTGTCCGT
GCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTG
GCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCCCGTTGACGTTGG
GTTTGGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGGAGGATAGTGAGG
ATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAAGAGAAGGAT
GAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTATGCGCGGTT
CGAGGACTTTTCGAAGACGTTGATTGCGGAGATTGAGGGGCAATGAATGC
CTCTCGACGGGGTGAAGAATGTTGTGCTGGTCCTCTCGGGCAAAGGCGGC
GTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCGCGCTCACCCTGCA
AGGCAAATCCGTTGGTATCCTGGACATCGATCTCACCGGCCCTTCAATCC
CACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCAAGCGCCAGGCGGT
TGGCTTCCTGTTCCCGTTCACCCTTCCACCATCATCACCACACCCAATGC
CTCCTCCACCTCACAACCAGATACAACAACAACGGCAACAGAAACAGAAG
GTGGAAGCGCCATAAAACACGGCTCTCTCCGCTGCATGTCCCTCGGCTTC
CTTTTACGTTCCCGGTCCGATGCCGTAATCTGGCGCGGGCCCAAAAAGAC
AGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAACTGATT
ACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGAGCATATTGCTCTT
GCGGAGCAGCTCTTGACGCTTTGTACGATCGATGCTTCCTCTGCAACTGG
AATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAGGCGGTAG
CAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGTTAAGACGAGGATT
CCGATGCTGGGGGTGGTGGAGAATATGTCTGGTTATACGTGTCCGTGCTG
TGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTGGCAG
AAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCCCGTTGACGTTGGGTTT
GGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGGAGGATAGTGAGGATGA
GGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAAGAGAAGGATGAGA
GGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTATGCGCGGTTCGAG
GACTTTTCGAAGACGTTGATTGCGGAGATTGAGGGGCAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CFD1M747DRAFT_299176Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299176-T1.utr5p1M747DRAFT_299176-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299176-T1.exon1M747DRAFT_299176-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_299176-T1.exon2M747DRAFT_299176-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299176-T1.cdsM747DRAFT_299176-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299176-T1.utr3p1M747DRAFT_299176-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299176-T1M747DRAFT_299176-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR028600
DBxrefInterPro:IPR019591
DBxrefInterPro:IPR033756
DBxrefPFAM:PF01656
Productcytosolic Fe-S cluster assembly factor cfd1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851945.1supercontigKZ851945.1:81466..82872 +
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