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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851946.1:222760..224299+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_299290-T1 ID=M747DRAFT_299290-T1|Name=M747DRAFT_299290-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1540bp|location=Sequence derived from alignment at KZ851946.1:222760..224299+ (Aspergillus niger ATCC 13496)
AGAAAGGCTCGTCACTAGGCCTTTTTTCATCAAGATTCGGAACCTTTTTC
AGGCGTGACGTCTGGCGTATGACTGCTGCGTCAGTCAAACCCTGAAGGTA
CGTGTCTGCTGCTAGTTTGCACACGGCGCATCACATCATCCACCACTTCT
CTCTATACTATATATCGGACTCTCCGTTCATCATGTCCTTTCCGCCACCT
CCAGGTCTCAGACAAGCCCCGTCGTCTCTTCCTCCCCGGCCACCGGCAAC
AGCAAGCGGTGCCTCACCATCTACCTTTCAACCTGCATATTCGGCGGCAC
CGTCTGGTGCAAGCAGCAGCTATGGCGGAAACGGGTCTCGGCCGGGCTAC
AGCGCCATCACAGCATTCCAGCCTCGCTCGGTAGCTTCTAGCCAACCTTA
CCGTACCAGCAGCCCCGTCGTGTCCGCTCCGCCAACTACATCTAGTGGAT
ATTCGACACCGACCACGGGCAGTTACGGTGGCTACTACCCTCAGGCGCAA
GCGTCATACCAAAGCGGTCCTTCTTACTACGGAGCCGCCCAATACAATGA
AAACACATACGGTCCGTCTGTACCGCGGATTCAAAACCCCTTCACGCCCG
CAGGGGGGGATCAGTCAGGCGCCTATGGCATGCGGGGGAGGAACTTTGGC
CGGAATGAATCGGGGCTGGACCCTGAAACGGAAGCCCAGATTGCACAGTG
GCAGAGTGCCTACGTAAACAAGGAGGAGATGCCCGTAGCCGGCAAGGTTC
CTGGTCGCCCGGGTGTTAACCCGGGTGTTTCTGGTCCCACTTCTGGTGCA
AATACCCCATCCGGATCCAATACAGCGGCTAACACGCCAGCACCCACCGT
GGGTAACCCGGAGCCTGCACCGAAGACTGTGGTTCGTGCCGGAGGTGGTC
AGACCTGGTCCGATTCGACCCTACTCGAGTGGGATCCCGCACATTTTCGC
TTGTTTGTAGGCAATCTGGCTGGTGAGGTCACGGACGATTCGCTACTCAA
GGCATTCTCCAAGTATACCTCTGTTCAAAAGGCTCGAGTAATCCGTGACA
AACGTACCCAGAAGAGTAAAGGCTACGGATTCGTCAGTTTCAGCGACGGC
GACGATTATTTCAAGGCTGCGAGAGAGATGCAGGGCAAGTACATTGGCTC
GCATCCGGTTCTGCTCCGACGAGCCACCACAGAGGTCCGTCCCGTGTCCA
ACACGAAAAATGGGAAGAAGCATGGTGGTGGAGGCGGTTCGGGTGGTGGC
TCCGGCAGTGGTAAGGTCAAGCACGATGGAGTCAAAAAGCACGGAAAGAC
CAAGGGAGGACTCAAGATTATTGGATGAAGGGAGGCATGCTGTATGTCCT
CGAAGATAAATATTTTGACAATCGGATAAATATAATGCATAAAGTTACGT
CTACAGTGATAGAATTAACAGGGAGCAGCGGGATACCGACGCCTTGAATT
ACTATTCGCATCCTTCCAAGGTCGTCATACAGCAGTCACATATCGGTTAC
AGAAGTTACTGCGCAATTGAACACGTTCATCTGCTAAAGC back to topCoding sequence (CDS) from alignment at KZ851946.1:222760..224299+ >M747DRAFT_299290-T1 ID=M747DRAFT_299290-T1|Name=M747DRAFT_299290-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1146bp|location=Sequence derived from alignment at KZ851946.1:222760..224299+ (Aspergillus niger ATCC 13496)
ATGTCCTTTCCGCCACCTCCAGGTCTCAGACAAGCCCCGTCGTCTCTTCC
TCCCCGGCCACCGGCAACAGCAAGCGGTGCCTCACCATCTACCTTTCAAC
CTGCATATTCGGCGGCACCGTCTGGTGCAAGCAGCAGCTATGGCGGAAAC
GGGTCTCGGCCGGGCTACAGCGCCATCACAGCATTCCAGCCTCGCTCGGT
AGCTTCTAGCCAACCTTACCGTACCAGCAGCCCCGTCGTGTCCGCTCCGC
CAACTACATCTAGTGGATATTCGACACCGACCACGGGCAGTTACGGTGGC
TACTACCCTCAGGCGCAAGCGTCATACCAAAGCGGTCCTTCTTACTACGG
AGCCGCCCAATACAATGAAAACACATACGGTCCGTCTGTACCGCGGATTC
AAAACCCCTTCACGCCCGCAGGGGGGGATCAGTCAGGCGCCTATGGCATG
CGGGGGAGGAACTTTGGCCGGAATGAATCGGGGCTGGACCCTGAAACGGA
AGCCCAGATTGCACAGTGGCAGAGTGCCTACGTAAACAAGGAGGAGATGC
CCGTAGCCGGCAAGGTTCCTGGTCGCCCGGGTGTTAACCCGGGTGTTTCT
GGTCCCACTTCTGGTGCAAATACCCCATCCGGATCCAATACAGCGGCTAA
CACGCCAGCACCCACCGTGGGTAACCCGGAGCCTGCACCGAAGACTGTGG
TTCGTGCCGGAGGTGGTCAGACCTGGTCCGATTCGACCCTACTCGAGTGG
GATCCCGCACATTTTCGCTTGTTTGTAGGCAATCTGGCTGGTGAGGTCAC
GGACGATTCGCTACTCAAGGCATTCTCCAAGTATACCTCTGTTCAAAAGG
CTCGAGTAATCCGTGACAAACGTACCCAGAAGAGTAAAGGCTACGGATTC
GTCAGTTTCAGCGACGGCGACGATTATTTCAAGGCTGCGAGAGAGATGCA
GGGCAAGTACATTGGCTCGCATCCGGTTCTGCTCCGACGAGCCACCACAG
AGGTCCGTCCCGTGTCCAACACGAAAAATGGGAAGAAGCATGGTGGTGGA
GGCGGTTCGGGTGGTGGCTCCGGCAGTGGTAAGGTCAAGCACGATGGAGT
CAAAAAGCACGGAAAGACCAAGGGAGGACTCAAGATTATTGGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034215 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | RNA-binding domain-containing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851946.1 | supercontig | KZ851946.1:222760..224299 + |
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