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M747DRAFT_299362-T1, M747DRAFT_299362-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299362-T1
Unique NameM747DRAFT_299362-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851947.1:228426..230942+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299362-T1 ID=M747DRAFT_299362-T1|Name=M747DRAFT_299362-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2517bp|location=Sequence derived from alignment at KZ851947.1:228426..230942+ (Aspergillus niger ATCC 13496)
TTCCCATTGCTGCTGCTGCCAGAGTCCAACGGGTCCGTCTGTCTGGTCTC
TGCTTCTCAACATGGATTCCACAGCGGATTTTGGCTCGTTACAGCAACGG
GTGCAGTCGTCCCTGATGCAGGTGACGCGCACTGCCGGTCAACTTTCAGC
CGAAGATCTCGATTTCCATCGCACCTCTAACGCAGAGGTTTCTGATTCCC
TGGACGAGCAGAGCAACCGACTCTTGTCGCTCACTTCTTCTATTTTGAAA
GCCGCCACCGCCGGAACCGATGTTTCTGCACCGACCTTAGACGACGAAGA
TTCCCTCGAAGATAATTGGCGCGGCGTCGTGGATGTCATCGATGCGCTAT
TGGAAAAGGCCGACGCATGCTTGGATGAATTCACCGGTGTTATTAAGAAA
TTGAGCCCGTCGCAACAGGATCAAGCTGCCGCTGCCGCTGCGAAGGCTTC
GAAGAAGCAACCCGCTAAATTCCCGACCATTTACGACTACGGCCCGTCGA
AGATCCCGAAGCCGCAATTGCTGTTCGAACGCAAGGCCGATAACACCGAT
ACCGCGCCTTTCAAGCCTTTGCTTAAGACGAAGCCTCATGCCGTTGTTCC
GCTGAAAGACTCGTTAAAGTTGTCCGATTCCGCTGTCGGATATGTCAACC
CGTACGAGAAGGAGATTCGTGCCGCAAAGTTCCCCACTTCTTCCTACAGC
GTGTCGCCGCCTGTGGATTATCAGCCGTGGGAGTCGACAAAGGCGACTTT
TGTGGATACTCTGGAGGGAGTGAAGGAGATGTTGGAGGAACTTAAGGCCG
CGAAGGAGATCGCGATTGATTTGGAGCATCACGATGTGCACTCGTATCAG
GGTCTTGTCTCCTTGATGCAGATCAGCACTCGGGATAAGGATTGGGTTGT
TGATACGCTTAAGCCGTGGAGGGAGGAGCTGCAAGTTCTTAACGAAGTGT
TCACGGATCCCAACATCTTGAAGGTGCTTCACGGTTCCTCGATGGATATT
ATCTGGCTTCAGCGCGACTTGGGGCTGTACGTCGTTGGCATGTTCGATAC
ATACCATGCTGCTTGCGCGTTGAACTACCCCAAGCGCAGTTTGAAGTTCC
TGCTGCAGAAGTTTGTCAACTTCGAAGCCGATAAACGTTACCAGATGGCC
GACTGGCGCATTCGACCGATCCCGGAAGGCATGTTCGATTACGCTCGTTC
GGATACTCACTACCTTCTTCACATCTACGACCACATTCGCAACGAACTTG
TCGAAAACTCCCTCCCCGACAACAACCTTATCGACTACGTCCTGGAGCAG
TCTAAGAAGGAAGCTCTGCAAGTATATGAGCGTCCTGTTTACGATGCTGC
TACTGGTCAAGGACCGGGTGGTTGGTACGACCTCCTTTCTCGCAATTCGG
TCGTGGTCAACAGGGAACAGTTTGCCGTATTCAAAGCAGTACATCAGTGG
CGTGACGAGGTTGCTAGAGAGGAAGACGAGGGCGTGCAATGCGTGTTCCC
GAAACACGTTCTCTTCAGGGTTGCTCACACTATGCCGCTCGACTTGGGCA
CCCTGTTCCGGACATTGTCACCTGTGACACCAATTGTCCAAAACCGCGCT
GTAGACCTTTTGGAAGTCATCAAGAAGGCTAAGGATGAGGGCGCTGATGG
CCCTGAATGGCGTGACGTCTACGTCAAGCCAACCAGGGGTACACCGGCCG
CGCCGGCGACACAGCCAGTCGATGTCCCGTCCCCGACCCCAGCAGACGAG
GCCAATCTCCCCACTGTTTCTCGCTACGAGGTCTCCCAATTCTGGGGTTC
CGTGTTGGAGTCACAAGAACCTCCCACGGTCCCTGCATACTCCGCCGTTG
CTTCAGCCGAAGCTCTCCGTCTCTCCCTCCCCCTTCCGCCTATGCCTAAA
ACCGTCTCCGAAGCCCGCGAAAAGCTCGCACCCGCTCAACCTCAAACCCC
GAAACCCGCTACCTCTGCACCCGCCGTTAAGGAAGAGAAGAAAGAGGACG
AGAACAAGTACTTCACCGTCAAGGAAATGGGTGGACCACGTAAGCGCAAG
GCCGCCCCCGCAGAGACGGCCGAGCAATTGCAGTCCGCCTCATCGGATTT
CGACACCACTGACGCCAGTTCCTCGTTGGACACTGAAGATAAGCCATCCA
AGAAACAGCGCCGCAAGGAGAAGAAGAACAAGCCCGCAGCACAACCCGAG
ACAGCTGCCGAGGAGGACGGAGAAGAGGAGGAAGAGGAGGCTCCCTTCAA
CTACGAGTCCGCTGCCTCTGTATTCAATGCCAACCCCAAGGCTACTTCGG
GACTCCCGTCCAGGCGTCGTTATAATCCCTATGCTAAGGTGCTCGATGCC
CCGTCGGGAGTGCGGAAGCAGAAACGCGAGACTGCCGGAAAGGCGTTTAC
GTTCCGGTGATTTGTTGGGTGCGTGTGATGCAAGGGAGTGTTGTTTCTTG
GTCAGAGGAATGGTGCGCAAAAGCATGGGCATGGACATAGTGTTTGTAAA
TGCATAGCGATACCCGG
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Coding sequence (CDS) from alignment at KZ851947.1:228426..230942+

>M747DRAFT_299362-T1 ID=M747DRAFT_299362-T1|Name=M747DRAFT_299362-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2349bp|location=Sequence derived from alignment at KZ851947.1:228426..230942+ (Aspergillus niger ATCC 13496)
ATGGATTCCACAGCGGATTTTGGCTCGTTACAGCAACGGGTGCAGTCGTC
CCTGATGCAGGTGACGCGCACTGCCGGTCAACTTTCAGCCGAAGATCTCG
ATTTCCATCGCACCTCTAACGCAGAGGTTTCTGATTCCCTGGACGAGCAG
AGCAACCGACTCTTGTCGCTCACTTCTTCTATTTTGAAAGCCGCCACCGC
CGGAACCGATGTTTCTGCACCGACCTTAGACGACGAAGATTCCCTCGAAG
ATAATTGGCGCGGCGTCGTGGATGTCATCGATGCGCTATTGGAAAAGGCC
GACGCATGCTTGGATGAATTCACCGGTGTTATTAAGAAATTGAGCCCGTC
GCAACAGGATCAAGCTGCCGCTGCCGCTGCGAAGGCTTCGAAGAAGCAAC
CCGCTAAATTCCCGACCATTTACGACTACGGCCCGTCGAAGATCCCGAAG
CCGCAATTGCTGTTCGAACGCAAGGCCGATAACACCGATACCGCGCCTTT
CAAGCCTTTGCTTAAGACGAAGCCTCATGCCGTTGTTCCGCTGAAAGACT
CGTTAAAGTTGTCCGATTCCGCTGTCGGATATGTCAACCCGTACGAGAAG
GAGATTCGTGCCGCAAAGTTCCCCACTTCTTCCTACAGCGTGTCGCCGCC
TGTGGATTATCAGCCGTGGGAGTCGACAAAGGCGACTTTTGTGGATACTC
TGGAGGGAGTGAAGGAGATGTTGGAGGAACTTAAGGCCGCGAAGGAGATC
GCGATTGATTTGGAGCATCACGATGTGCACTCGTATCAGGGTCTTGTCTC
CTTGATGCAGATCAGCACTCGGGATAAGGATTGGGTTGTTGATACGCTTA
AGCCGTGGAGGGAGGAGCTGCAAGTTCTTAACGAAGTGTTCACGGATCCC
AACATCTTGAAGGTGCTTCACGGTTCCTCGATGGATATTATCTGGCTTCA
GCGCGACTTGGGGCTGTACGTCGTTGGCATGTTCGATACATACCATGCTG
CTTGCGCGTTGAACTACCCCAAGCGCAGTTTGAAGTTCCTGCTGCAGAAG
TTTGTCAACTTCGAAGCCGATAAACGTTACCAGATGGCCGACTGGCGCAT
TCGACCGATCCCGGAAGGCATGTTCGATTACGCTCGTTCGGATACTCACT
ACCTTCTTCACATCTACGACCACATTCGCAACGAACTTGTCGAAAACTCC
CTCCCCGACAACAACCTTATCGACTACGTCCTGGAGCAGTCTAAGAAGGA
AGCTCTGCAAGTATATGAGCGTCCTGTTTACGATGCTGCTACTGGTCAAG
GACCGGGTGGTTGGTACGACCTCCTTTCTCGCAATTCGGTCGTGGTCAAC
AGGGAACAGTTTGCCGTATTCAAAGCAGTACATCAGTGGCGTGACGAGGT
TGCTAGAGAGGAAGACGAGGGCGTGCAATGCGTGTTCCCGAAACACGTTC
TCTTCAGGGTTGCTCACACTATGCCGCTCGACTTGGGCACCCTGTTCCGG
ACATTGTCACCTGTGACACCAATTGTCCAAAACCGCGCTGTAGACCTTTT
GGAAGTCATCAAGAAGGCTAAGGATGAGGGCGCTGATGGCCCTGAATGGC
GTGACGTCTACGTCAAGCCAACCAGGGGTACACCGGCCGCGCCGGCGACA
CAGCCAGTCGATGTCCCGTCCCCGACCCCAGCAGACGAGGCCAATCTCCC
CACTGTTTCTCGCTACGAGGTCTCCCAATTCTGGGGTTCCGTGTTGGAGT
CACAAGAACCTCCCACGGTCCCTGCATACTCCGCCGTTGCTTCAGCCGAA
GCTCTCCGTCTCTCCCTCCCCCTTCCGCCTATGCCTAAAACCGTCTCCGA
AGCCCGCGAAAAGCTCGCACCCGCTCAACCTCAAACCCCGAAACCCGCTA
CCTCTGCACCCGCCGTTAAGGAAGAGAAGAAAGAGGACGAGAACAAGTAC
TTCACCGTCAAGGAAATGGGTGGACCACGTAAGCGCAAGGCCGCCCCCGC
AGAGACGGCCGAGCAATTGCAGTCCGCCTCATCGGATTTCGACACCACTG
ACGCCAGTTCCTCGTTGGACACTGAAGATAAGCCATCCAAGAAACAGCGC
CGCAAGGAGAAGAAGAACAAGCCCGCAGCACAACCCGAGACAGCTGCCGA
GGAGGACGGAGAAGAGGAGGAAGAGGAGGCTCCCTTCAACTACGAGTCCG
CTGCCTCTGTATTCAATGCCAACCCCAAGGCTACTTCGGGACTCCCGTCC
AGGCGTCGTTATAATCCCTATGCTAAGGTGCTCGATGCCCCGTCGGGAGT
GCGGAAGCAGAAACGCGAGACTGCCGGAAAGGCGTTTACGTTCCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000176nuclear exosome (RNase complex)
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO:0006396RNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:00084083'-5' exonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_299362M747DRAFT_299362Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299362-T1.utr5p1M747DRAFT_299362-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299362-T1.exon1M747DRAFT_299362-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299362-T1.cdsM747DRAFT_299362-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299362-T1.utr3p1M747DRAFT_299362-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299362-T1M747DRAFT_299362-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926158Y
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR010997
DBxrefInterPro:IPR012588
DBxrefInterPro:IPR002562
DBxrefInterPro:IPR002121
DBxrefPFAM:PF08066
DBxrefPFAM:PF00570
DBxrefPFAM:PF01612
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851947.1supercontigKZ851947.1:228426..230942 +
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