You are here

M747DRAFT_299436-T1, M747DRAFT_299436-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299436-T1
Unique NameM747DRAFT_299436-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851948.1:177837..178709-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299436-T1 ID=M747DRAFT_299436-T1|Name=M747DRAFT_299436-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=873bp|location=Sequence derived from alignment at KZ851948.1:177837..178709- (Aspergillus niger ATCC 13496)
CTTCCTCCCACCTCACCCAAACAATCCCAACCAAACCCCTCCATCCAAAC TCACGGGAATCCTACCCCCGTAGGCCCTTCACCATGGCCTTCCGCAACGG GTCCTTCGCGACCTTCCTCATTGTCTGCCGTACGCCCTCCCCCCACCCCC AGACACCTTCTCCCCAATCATTCCCCCCCCCCCCCCGGCGGAAATACTAA CGAAGTAATAAAAACAACAGCAACATCCTTCTTCCTCGGCCTGATCTTCT CCCTCTTCCCCTACGACTACCCGATCCTATGGTCCACGACCCCGACCCCA GCCACCCACTTCGACTACTTCGAATCCCACCTGCGATTCCTGCACGCCTC GCCGCCCCTAATCCCGCGGATTCTCCACATCGTGATATTCCTCGGCCTCT TGGGACTTATCATGAAGCTGTACAAACCCTCGGAATCGAATATGTTGTTC GATGGCGCCAGTCTCGTGCTGTATATGTGTGGAATTACGGTCTATATTGC GAATATTGTGAAGGGGTTGAGGTTGGTTAGTGGTGGGGTTTATGGGGATG AGTTGGTCAAAGGTGGGGAGGAGGAGGTCGAGCAAGGGCAGATTCTGGGT AGGGAGGATAGTTTGAAGGTGTTGGCGGCGAGTAATACTATCTTGGCGCT GGTGTTGGTGGGTGTGCTGGTGTTGCAGGCCGGGCAGTGGTATGCGGAGA GGAAGGAGGCGCAGGAGGTGGAGAGTTTTGCTTCTTCGAGTTCGAAGGGG AAGAAGGAGGAGGGGAGTGAGGGGGGGAAGAAGAAGAAGAATTGATTTCT TAGGGTGGGAAAAGTGTGCTGGTGGTAGTGGTGGTGGGTGGGGGTTGTTT AGTTTGGTGAGAGTTGTGAGGTT
back to top

Coding sequence (CDS) from alignment at KZ851948.1:177837..178709-

>M747DRAFT_299436-T1 ID=M747DRAFT_299436-T1|Name=M747DRAFT_299436-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1242bp|location=Sequence derived from alignment at KZ851948.1:177837..178709- (Aspergillus niger ATCC 13496)
CAACATCCTTCTTCCTCGGCCTGATCTTCTCCCTCTTCCCCTACGACTAC
CCGATCCTATGGTCCACGACCCCGACCCCAGCCACCCACTTCGACTACTT
CGAATCCCACCTGCGATTCCTGCACGCCTCGCCGCCCCTAATCCCGCGGA
TTCTCCACATCGTGATATTCCTCGGCCTCTTGGGACTTATCATGAAGCTG
TACAAACCCTCGGAATCGAATATGTTGTTCGATGGCGCCAGTCTCGTGCT
GTATATGTGTGGAATTACGGTCTATATTGCGAATATTGTGAAGGGGTTGA
GGTTGGTTAGTGGTGGGGTTTATGGGGATGAGTTGGTCAAAGGTGGGGAG
GAGGAGGTCGAGCAAGGGCAGATTCTGGGTAGGGAGGATAGTTTGAAGGT
GTTGGCGGCGAGTAATACTATCTTGGCGCTGGTGTTGGTGGGTGTGCTGG
TGTTGCAGGCCGGGCAGTGGTATGCGGAGAGGAAGGAGGCGCAGGAGGTG
GAGAGTTTTGCTTCTTCGAGTTCGAAGGGGAAGAAGGAGGAGGGGAGTGA
GGGGGGGAAGAAGAAGAAGAATTGAATGGCCTTCCGCAACGGGTCCTTCG
CGACCTTCCTCATTGTCTGCCCAACATCCTTCTTCCTCGGCCTGATCTTC
TCCCTCTTCCCCTACGACTACCCGATCCTATGGTCCACGACCCCGACCCC
AGCCACCCACTTCGACTACTTCGAATCCCACCTGCGATTCCTGCACGCCT
CGCCGCCCCTAATCCCGCGGATTCTCCACATCGTGATATTCCTCGGCCTC
TTGGGACTTATCATGAAGCTGTACAAACCCTCGGAATCGAATATGTTGTT
CGATGGCGCCAGTCTCGTGCTGTATATGTGTGGAATTACGGTCTATATTG
CGAATATTGTGAAGGGGTTGAGGTTGGTTAGTGGTGGGGTTTATGGGGAT
GAGTTGGTCAAAGGTGGGGAGGAGGAGGTCGAGCAAGGGCAGATTCTGGG
TAGGGAGGATAGTTTGAAGGTGTTGGCGGCGAGTAATACTATCTTGGCGC
TGGTGTTGGTGGGTGTGCTGGTGTTGCAGGCCGGGCAGTGGTATGCGGAG
AGGAAGGAGGCGCAGGAGGTGGAGAGTTTTGCTTCTTCGAGTTCGAAGGG
GAAGAAGGAGGAGGGGAGTGAGGGGGGGAAGAAGAAGAAGAATTGAATGG
CCTTCCGCAACGGGTCCTTCGCGACCTTCCTCATTGTCTGCC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_299436M747DRAFT_299436Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299436-T1M747DRAFT_299436-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299436-T1.cdsM747DRAFT_299436-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299436-T1.utr3p1M747DRAFT_299436-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299436-T1.exon2M747DRAFT_299436-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_299436-T1.exon1M747DRAFT_299436-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299436-T1.utr5p1M747DRAFT_299436-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013248
DBxrefPFAM:PF08229
ProductShr3 amino acid permease chaperone
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851948.1supercontigKZ851948.1:177837..178709 -