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M747DRAFT_299501-T1, M747DRAFT_299501-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299501-T1
Unique NameM747DRAFT_299501-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851950.1:47901..49031-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299501-T1 ID=M747DRAFT_299501-T1|Name=M747DRAFT_299501-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1131bp|location=Sequence derived from alignment at KZ851950.1:47901..49031- (Aspergillus niger ATCC 13496)
CCACCGCAGGCCCCGACACCCACCCTCCGCGACGAATTATACCACCCAGC
TCGACTTCGCTTCCTCGTCGGACTGAATTCTCGCAACAATGGCGACCGAG
TTGACCGTCCAGTCGGAACGTGCGTTCCAGAAGCAGCCTCACATCTTCGT
CAACCCCAAGGCTCAGGCGAAGAGCAAGAAGGTTGGCACCGGCCGCCGTT
GGTACAAGGATGTCGGTCTGGGTTTCCGTACCCCCAAGACCGCCATTGAG
GGCTCCTACATCGGTATGCACGACCTATGTTGAAATTTTATTTGCGGCGT
TATCGACTTCCGATCATGCGGGACCGGGACTGGGAATCTTTTGGAGGCTA
TGGGGAGATGAGAATATGCCGCATGGAGAAGAGAGAAATCACCTGGAAAG
CGCCAGCATGAGTCTACGATAAATGCAACTATCTTCTGCAAAGGATCGGG
ATGGAATGCGACAAGAGAAGGAATCAAAGATCAGACCTGGAAAAAGCGCT
TGGCGACAGATTTGCGGAACCCGGTTATTCTCATCTCTCAAAGGCTCCGG
AGAAGTCCAGTCATGTCGTTTGAAATCTCCAGGTGGGACATATCACTGAT
ATCGAACAGACAAGAAGTGCCCCTTCACCGGTCTGGTTTCCATCCGTGGC
CGTATCCTGACCGGCCGTGTCGTCTCCACCAAGATGCACCGTACCATCGT
CATCCGCCGTGAATACCTCCACTACGTCCCCAAGTACAACCGTTACGAGA
AGAGACACAAGAACCTTGCCGCTCACGTCTCTCCCGCTTTCCGTGTTGAG
GAAGGTGACTGGGTCACCGTCGGCCAGTGCCGCCCCCTGAGCAAGACTGT
ACGTCAAACTTTCCTCGGGATATCTTCTATGGCTACTGGTGGCAAATGCG
TTCCTTTCCTTATACGCCTGAAAGGATACGGATTATGTCCAGCGCTATTG
AAGATATTCTACATGGGTCGCAAAATTATATACGTCAGATGCGCTAACTT
ACTATTCAGGTCCGCTTCAACGTCCTCCGTGTCCTGCCCCGTACCGGCAA
GGCCGTCAAGGCTTTCTCCAAGTTCTAAGCGTCTCGATGAGGAAGGGTGT
GTTGTCGCGAGGACGAACCTAGGGCAGCGGC
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Coding sequence (CDS) from alignment at KZ851950.1:47901..49031-

>M747DRAFT_299501-T1 ID=M747DRAFT_299501-T1|Name=M747DRAFT_299501-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1449bp|location=Sequence derived from alignment at KZ851950.1:47901..49031- (Aspergillus niger ATCC 13496)
GTCCGCTTCAACGTCCTCCGTGTCCTGCCCCGTACCGGCAAGGCCGTCAA
GGCTTTCTCCAAGTTCTAAACAAGAAGTGCCCCTTCACCGGTCTGGTTTC
CATCCGTGGCCGTATCCTGACCGGCCGTGTCGTCTCCACCAAGATGCACC
GTACCATCGTCATCCGCCGTGAATACCTCCACTACGTCCCCAAGTACAAC
CGTTACGAGAAGAGACACAAGAACCTTGCCGCTCACGTCTCTCCCGCTTT
CCGTGTTGAGGAAGGTGACTGGGTCACCGTCGGCCAGTGCCGCCCCCTGA
GCAAGACTATGGCGACCGAGTTGACCGTCCAGTCGGAACGTGCGTTCCAG
AAGCAGCCTCACATCTTCGTCAACCCCAAGGCTCAGGCGAAGAGCAAGAA
GGTTGGCACCGGCCGCCGTTGGTACAAGGATGTCGGTCTGGGTTTCCGTA
CCCCCAAGACCGCCATTGAGGGCTCCTACATCGGTCCGCTTCAACGTCCT
CCGTGTCCTGCCCCGTACCGGCAAGGCCGTCAAGGCTTTCTCCAAGTTCT
AAACAAGAAGTGCCCCTTCACCGGTCTGGTTTCCATCCGTGGCCGTATCC
TGACCGGCCGTGTCGTCTCCACCAAGATGCACCGTACCATCGTCATCCGC
CGTGAATACCTCCACTACGTCCCCAAGTACAACCGTTACGAGAAGAGACA
CAAGAACCTTGCCGCTCACGTCTCTCCCGCTTTCCGTGTTGAGGAAGGTG
ACTGGGTCACCGTCGGCCAGTGCCGCCCCCTGAGCAAGACTATGGCGACC
GAGTTGACCGTCCAGTCGGAACGTGCGTTCCAGAAGCAGCCTCACATCTT
CGTCAACCCCAAGGCTCAGGCGAAGAGCAAGAAGGTTGGCACCGGCCGCC
GTTGGTACAAGGATGTCGGTCTGGGTTTCCGTACCCCCAAGACCGCCATT
GAGGGCTCCTACATCGGTCCGCTTCAACGTCCTCCGTGTCCTGCCCCGTA
CCGGCAAGGCCGTCAAGGCTTTCTCCAAGTTCTAAACAAGAAGTGCCCCT
TCACCGGTCTGGTTTCCATCCGTGGCCGTATCCTGACCGGCCGTGTCGTC
TCCACCAAGATGCACCGTACCATCGTCATCCGCCGTGAATACCTCCACTA
CGTCCCCAAGTACAACCGTTACGAGAAGAGACACAAGAACCTTGCCGCTC
ACGTCTCTCCCGCTTTCCGTGTTGAGGAAGGTGACTGGGTCACCGTCGGC
CAGTGCCGCCCCCTGAGCAAGACTATGGCGACCGAGTTGACCGTCCAGTC
GGAACGTGCGTTCCAGAAGCAGCCTCACATCTTCGTCAACCCCAAGGCTC
AGGCGAAGAGCAAGAAGGTTGGCACCGGCCGCCGTTGGTACAAGGATGTC
GGTCTGGGTTTCCGTACCCCCAAGACCGCCATTGAGGGCTCCTACATCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS11AM747DRAFT_299501Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299501-T1M747DRAFT_299501-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299501-T1.cdsM747DRAFT_299501-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299501-T1.utr3p1M747DRAFT_299501-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299501-T1.exon3M747DRAFT_299501-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_299501-T1.exon2M747DRAFT_299501-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_299501-T1.exon1M747DRAFT_299501-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299501-T1.utr5p1M747DRAFT_299501-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092653NM
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR019979
DBxrefInterPro:IPR028333
DBxrefInterPro:IPR032440
DBxrefInterPro:IPR000266
DBxrefPFAM:PF16205
DBxrefPFAM:PF00366
Productribosomal 40S subunit protein S11A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851950.1supercontigKZ851950.1:47901..49031 -
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