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M747DRAFT_299528-T1, M747DRAFT_299528-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299528-T1
Unique NameM747DRAFT_299528-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851950.1:148279..149672-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299528-T1 ID=M747DRAFT_299528-T1|Name=M747DRAFT_299528-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1394bp|location=Sequence derived from alignment at KZ851950.1:148279..149672- (Aspergillus niger ATCC 13496)
TCAGTATCCAACTCCACGAACTTGACAGCTGATCGCGGGTCTCTCCCCCG
GAAGAGCCTCACCGCCTGCCAGCTCCAATCGCGGCTTTCCCCCATCGGTT
CGAATCCACACTCAAGTCCAACTTCCTTCGTCTTCAGTTCTCACCTTTCA
CCCCTTCGCCTCTGCTTCCTCCAGTGGTGCTTCCCTGCCCCTGAGCACGG
CCACCTCTCCGCTCCTCCCCTCCTTCTTGCCTGCTTGTTAGCACCCTTTT
CGAGTCTTTCGAGCATCTCTTTTCCACTCTGCCCACCATGTCCGGTGAAG
CCTGGCTCTATCTGCTGGCGGTGTTGATTAACGCCGTCAACCTGTTCCTG
CAGGTCTTCTTTACTATCATGTACAGCGATCTGGAATGGTATGATCTGGC
TCTATCCTCCCTCTTGTCTCGCCGATTTCTGTCGTGTGCGTGGACGAGCT
CTTGTGAGCCGCATGGGAGCTCGCCATGGATTGCGACAGCGTGATGGAAC
CCAACCAGCTAACGAACCCGGTTCGCTCCCGCAGTGACTACATCAACCCC
ATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTCCCGAAGCCGCCGT
TCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGCTACTGGGTCGCCA
TCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAAGAAGTAATGCTGT
CTTTTCCAGCTCCGCCATGCTGCAGCCCAACTAACACAACCGTCCTTTCT
GCAGGATCTACGAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGC
AAGCTGAACGTCCACAAGAAGGTTAGACTGCACTGTCCCAATCCCGCTAC
CAGGGCGGACCGACCGCTGACGCAAACTGCAGGAATCTTTCATCAAGCTG
GGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACAGCATGATCGTCGC
CTTGATCCGCGACGAGTCTCACTGACTTCGTGGCAAGACGGAACACGCAC
TGCGCAACGGCCGCTCGGGCTGAAGTGTCATGTAGTGCGAATGTCTTGAC
TTCTCCTTTGGCTAGAGAAGATTGGACGGAGCATGGTTCTGCGAGTATCT
GTCTCGCTGCTGTATCCCGACGCAACTTGCGCCTCTCGTCCCGGCTGCTT
GACACTGCCGTCGGTGTGCCGGCGCGTGCAGCAGAAGAGACCTTGTATAT
GACGTGACTATGAAAGCATATCATTGATGACAGCGAATGCGTGGGGTCTC
AAGATCTTGATGTTTTTTTAGGTTTGCGGAAGAGAAGATAGGCGATAGAT
GAGGTAATCCGGTCGCCTGGGAGCAGCACGCCGGTGAGGCTGCTTGAGTT
GTTTTTGTTTGCTTAGTGTACTTTCCTTGGGTTTCTGATGTTGC
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Coding sequence (CDS) from alignment at KZ851950.1:148279..149672-

>M747DRAFT_299528-T1 ID=M747DRAFT_299528-T1|Name=M747DRAFT_299528-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1668bp|location=Sequence derived from alignment at KZ851950.1:148279..149672- (Aspergillus niger ATCC 13496)
GAATCTTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACCT
CTACAGCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGAGATCTAC
GAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAAGCTGAACGT
CCACAAGAAGTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAAC
GCCTACATTGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTT
CATCATCAATGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGG
CGTTCAATGCTAAGAAATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGG
TGTTGATTAACGCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCATG
TACAGCGATCTGGAATGGAATCTTTCATCAAGCTGGGCTTCCACCTCCTG
ATGTTCTTCTTCTACCTCTACAGCATGATCGTCGCCTTGATCCGCGACGA
GTCTCACTGAGATCTACGAGAACCAGCACCTCCTGGATGCGACCGAGATC
TTCCGCAAGCTGAACGTCCACAAGAAGTGACTACATCAACCCCATTGATC
TGTGCAACCGCCTCAACGCCTACATTGTTCCCGAAGCCGCCGTTCACGCT
TTCTTGACCTTCCTGTTCATCATCAATGGCTACTGGGTCGCCATCGTCCT
GAACCTGCCTCTGTTGGCGTTCAATGCTAAGAAATGTCCGGTGAAGCCTG
GCTCTATCTGCTGGCGGTGTTGATTAACGCCGTCAACCTGTTCCTGCAGG
TCTTCTTTACTATCATGTACAGCGATCTGGAATGGAATCTTTCATCAAGC
TGGGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACAGCATGATCGTC
GCCTTGATCCGCGACGAGTCTCACTGAGATCTACGAGAACCAGCACCTCC
TGGATGCGACCGAGATCTTCCGCAAGCTGAACGTCCACAAGAAGTGACTA
CATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTCCCG
AAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGCTAC
TGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAAGAA
ATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAACGCCGT
CAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCTGGAAT
GGAATCTTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACC
TCTACAGCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGAGATCTA
CGAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAAGCTGAACG
TCCACAAGAAGTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAA
CGCCTACATTGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGT
TCATCATCAATGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTG
GCGTTCAATGCTAAGAAATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCG
GTGTTGATTAACGCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCAT
GTACAGCGATCTGGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERV14M747DRAFT_299528Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299528-T1M747DRAFT_299528-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299528-T1.cdsM747DRAFT_299528-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299528-T1.utr3p1M747DRAFT_299528-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299528-T1.exon4M747DRAFT_299528-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_299528-T1.exon3M747DRAFT_299528-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_299528-T1.exon2M747DRAFT_299528-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_299528-T1.exon1M747DRAFT_299528-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299528-T1.utr5p1M747DRAFT_299528-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR033466
DBxrefInterPro:IPR003377
DBxrefPFAM:PF03311
ProductCOPII-coated vesicle protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851950.1supercontigKZ851950.1:148279..149672 -
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