|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851953.1:37609..39068+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_299686-T1 ID=M747DRAFT_299686-T1|Name=M747DRAFT_299686-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1460bp|location=Sequence derived from alignment at KZ851953.1:37609..39068+ (Aspergillus niger ATCC 13496)
ATCCCCAATTCACAACCAGCACCATGCCTAACACCCGTCCCCTTGTCCGT
GCGGCATGCCATAATCTCTCCGGCATGCGCCATGCTTCTACTAGCGCCAC
GAAAAAGGCTGGCCCCCTCGCCGGCATCACTGTCGTCAGTCTGGAACAAG
CCATAGCCGCTCCCTTCTGTACCCGCCAACTAGCCGACCTAGGAGCCCGA
GTCATCAAAGTCGAACGACCTGGCGTCGGAGACTTTGCTCGCAATTATGA
CACCCGCGTTAACGGCCTAGCCTCCCACTTCGTCTGGACCAACCGGTCTA
AAGAGAGTCTCGCCTTGGACCTCAAAAAGCCGTCCGATCACAGCGTGCTC
ATGCGCCTGCTCGGCCGCGCCGATGTCCTCGTCCAGAACCTCGCTCCCGG
CGCCAGTGCTCGACTGGGTTTATCCTACGATGATCTCAAAGCGGCTCATC
CATCCTTGATTGTGTGCAACATCTCCGGGTATGGTCCTGACGGACCGTAC
CGCGATAAGAAGGCCTACGATCTGTTGATCCAGAGCGAGGCTGGCATGCT
CTCCGTCACGGGGACGGGAAAAGAGCCCGCCAAGGTGGGCATCTCCATCG
CTGATATTTCCGCTGGTAGCTATGCCTACTCCAATATCCTGGCGGCGTTG
TATCAGCGGGAGAGGGATCCCTCGAAGCGGGGGTGTAACATTGATATCTC
CATGTTGGAGAGCATGGTTGAGTGGATGGGCTTCCCTATGTATTATACTT
ATGAGAATGCCCCGGGCCCGACACCAGCGGGTGCTTCGCATGCGGCTATC
TATCCTTATGGCCCGTTTGAGACGGGAGATGGAACGGTGATGTTGGGGAT
CCAGAATGAGCGTGAGTGGGCTAAGTTCTGTGACATCGTCTTGGGTCAAC
CCAGTCTTGCTACGAATGAGCGGTTTGTGAATAACTCGCTGCGCTCGCAG
AACCGTGATGAGTTGAAGAAGATAATCTGTGACGTCTTCTCGTCGCTTTC
GGCGGAGCAGGTGATTGCTCGACTGGATGCAGCGGCGATTGCTAATGCCA
GCGTCAATGATATGCAAGGCGTCTGGAACCACCCACAGCTCAAGGCTCGG
CAGCGATGGACAGATGTTAAGACGCCCGCAGGAAGTGTGCCGGCTCTGCT
ACCTCCTGGAATGACCATGGGGGATGAGGATACTTATGGGGCGCGCATGG
ACGCTGTCCCTGATGTGGGTGAGCATAACAAGGCTATTCTGGCCGAGTTG
GGGCTCGACGAGGGTACGGAGAAATAGCTGCAGTTGAATTAATGACATGT
ACAGTTGAGCTAGTGGACTTGGCTATCCTTGCGAGTATTGGAACTTTTAG
GCCCTTTGTAAATAACTCAGTGCGATGGATTCACCTCGGGCAATTCTACT
GTCCACTCACGAGGTTGAAGATACCTGCATGTCAAAGGATGTTCAGACGT
AGAACTAGTC back to topCoding sequence (CDS) from alignment at KZ851953.1:37609..39068+ >M747DRAFT_299686-T1 ID=M747DRAFT_299686-T1|Name=M747DRAFT_299686-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1254bp|location=Sequence derived from alignment at KZ851953.1:37609..39068+ (Aspergillus niger ATCC 13496)
ATGCCTAACACCCGTCCCCTTGTCCGTGCGGCATGCCATAATCTCTCCGG
CATGCGCCATGCTTCTACTAGCGCCACGAAAAAGGCTGGCCCCCTCGCCG
GCATCACTGTCGTCAGTCTGGAACAAGCCATAGCCGCTCCCTTCTGTACC
CGCCAACTAGCCGACCTAGGAGCCCGAGTCATCAAAGTCGAACGACCTGG
CGTCGGAGACTTTGCTCGCAATTATGACACCCGCGTTAACGGCCTAGCCT
CCCACTTCGTCTGGACCAACCGGTCTAAAGAGAGTCTCGCCTTGGACCTC
AAAAAGCCGTCCGATCACAGCGTGCTCATGCGCCTGCTCGGCCGCGCCGA
TGTCCTCGTCCAGAACCTCGCTCCCGGCGCCAGTGCTCGACTGGGTTTAT
CCTACGATGATCTCAAAGCGGCTCATCCATCCTTGATTGTGTGCAACATC
TCCGGGTATGGTCCTGACGGACCGTACCGCGATAAGAAGGCCTACGATCT
GTTGATCCAGAGCGAGGCTGGCATGCTCTCCGTCACGGGGACGGGAAAAG
AGCCCGCCAAGGTGGGCATCTCCATCGCTGATATTTCCGCTGGTAGCTAT
GCCTACTCCAATATCCTGGCGGCGTTGTATCAGCGGGAGAGGGATCCCTC
GAAGCGGGGGTGTAACATTGATATCTCCATGTTGGAGAGCATGGTTGAGT
GGATGGGCTTCCCTATGTATTATACTTATGAGAATGCCCCGGGCCCGACA
CCAGCGGGTGCTTCGCATGCGGCTATCTATCCTTATGGCCCGTTTGAGAC
GGGAGATGGAACGGTGATGTTGGGGATCCAGAATGAGCGTGAGTGGGCTA
AGTTCTGTGACATCGTCTTGGGTCAACCCAGTCTTGCTACGAATGAGCGG
TTTGTGAATAACTCGCTGCGCTCGCAGAACCGTGATGAGTTGAAGAAGAT
AATCTGTGACGTCTTCTCGTCGCTTTCGGCGGAGCAGGTGATTGCTCGAC
TGGATGCAGCGGCGATTGCTAATGCCAGCGTCAATGATATGCAAGGCGTC
TGGAACCACCCACAGCTCAAGGCTCGGCAGCGATGGACAGATGTTAAGAC
GCCCGCAGGAAGTGTGCCGGCTCTGCTACCTCCTGGAATGACCATGGGGG
ATGAGGATACTTATGGGGCGCGCATGGACGCTGTCCCTGATGTGGGTGAG
CATAACAAGGCTATTCTGGCCGAGTTGGGGCTCGACGAGGGTACGGAGAA
ATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008410 | CoA-transferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519531.1 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1189:L-carnitine dehydratase/bile acid-inducible |
| DBxref | InterPro:IPR003673 |
| DBxref | InterPro:IPR023606 |
| DBxref | PFAM:PF02515 |
| Product | CoA-transferase family III |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851953.1 | supercontig | KZ851953.1:37609..39068 + |
|
