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M747DRAFT_299849-T1, M747DRAFT_299849-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299849-T1
Unique NameM747DRAFT_299849-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851957.1:99508..100611+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299849-T1 ID=M747DRAFT_299849-T1|Name=M747DRAFT_299849-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1104bp|location=Sequence derived from alignment at KZ851957.1:99508..100611+ (Aspergillus niger ATCC 13496)
CAAGCACTCGTCCAAACCTCAATCCACAATTACCATCGCCATGTCATGTT
ACTTGTCTCAGAGCTGCTTTAGGCAGCTTGCGCGGAGTCCTTTGAGACAA
GGACCTCTGCCCAACTTCCTCGTCCCCGCTTTCTCTCACCCTCTTCGGAC
ACAACCTTTCTCGACCACGTCCCCAGTACAATCGCGAGTTGGCGGCGCCG
CGATCACCGTGCCCCCGGAGGTGTCTCTGAAGTTCATCGACCTCCCTCAG
CCTAAGACCAAGGCCAAGTCGGTTGACTTCCCTAACATGGCCGTTGAGGT
CAAAGGACCCCTGGGTAAGGAACAATGGCAACAATTCATAACAGCGGCGT
CGGAAAGCGGAGCGAGACTGACATCTGAGTGCTAGGTGAATTGTCGCTGA
ACATCCCTTCCTACGTGAAAATCGACTACGATGAAGCCCTTCGGAAAGCC
ACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGCGTGCTATGTGGGG
TGCGTAACTCCGTTGGAATTAAGTTTACTGTTGAATTATAGTTGACGGGA
GATTGTCTCTAGGAACCATGCGCGCCCACCTACAGAACCACATCCTCGGA
GTGTCAGAAGGTCACATTTGCATTCTGAGTTTCGTTGGTGTTGGTTACAG
AGCTAGCATCGAACCCACGGCGACCACCGTTGAGCCCCAATACCCCGGTC
AACAGTTCGTGTCCCTGAAGGTTGGATACTCGCACCCGATTGAGCTGGGT
ATTCCCCAGGGCGTCAAGGCCAGCACACCCCAGCCGACTCGTATCCTGTT
GGAGAGTGTGGACAAGCAGCTTGTGACCAAGTTCGCGGCGGAGATCCGCG
AATGGCGCAAGCCGGAACCTTACAAGGGCAAGGGTATCTTCGTCAACGGG
GAGACGATCAAGCTCAAGGACAAGAAGATTCGGTGAAATTGGCGTCTATA
TCTTGGGGGAACGAAACTGTGTTTATTATTTCTGTACATGTATATCCGAG
CACGGTTCTTTTGGTTCGCAATTGGTATCCTTTCTTTTTATGTACTTTTA
GACGCATCTAGCGTGCACGGTCTGACAGGACTGATCGAGAATCTATTACA
TTCA
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Coding sequence (CDS) from alignment at KZ851957.1:99508..100611+

>M747DRAFT_299849-T1 ID=M747DRAFT_299849-T1|Name=M747DRAFT_299849-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2286bp|location=Sequence derived from alignment at KZ851957.1:99508..100611+ (Aspergillus niger ATCC 13496)
ATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCTTGCGCGGAGTCC
TTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCGCTTTCTCTCACC
CTCTTCGGACACAACCTTTCTCGACCACGTCCCCAGTACAATCGCGAGTT
GGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCTGAAGTTCATCGA
CCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACTTCCCTAACATGG
CCGTTGAGGTCAAAGGACCCCTGGGTGAATTGTCGCTGAACATCCCTTCC
TACGTGAAAATCGACTACGATGAAGCCCTTCGGAAAGCCACTCTGGCTGT
TCAAGACTCAGAGATCACTCACCAGCGTGCTATGTGGGGAACCATGCGCG
CCCACCTACAGAACCACATCCTCGGAGTGTCAGAAGGTCACATTTGCATT
CTGAGTTTCGTTGGTGTTGGTTACAGAGCTAGCATCGAACCCACGGCGAC
CACCGTTGAGCCCCAATACCCCGGTCAACAGTTCGTGTCCCTGAAGGTTG
GATACTCGCACCCGATTGAGCTGGGTATTCCCCAGGGCGTCAAGGCCAGC
ACACCCCAGCCGACTCGTATCCTGTTGGAGAGTGTGGACAAGCAGCTTGT
GACCAAGTTCGCGGCGGAGATCCGCGAATGGCGCAAGCCGGAACCTTACA
AGGGCAAGGGTATCTTCGTCAACGGGGAGACGATCAAGCTCAAGGACAAG
AAGATTCGGTGAATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCT
TGCGCGGAGTCCTTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCG
CTTTCTCTCACCCTCTTCGGACACAACCTTTCTCGACCACGTCCCCAGTA
CAATCGCGAGTTGGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCT
GAAGTTCATCGACCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACT
TCCCTAACATGGCCGTTGAGGTCAAAGGACCCCTGGGTGAATTGTCGCTG
AACATCCCTTCCTACGTGAAAATCGACTACGATGAAGCCCTTCGGAAAGC
CACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGCGTGCTATGTGGG
GAACCATGCGCGCCCACCTACAGAACCACATCCTCGGAGTGTCAGAAGGT
CACATTTGCATTCTGAGTTTCGTTGGTGTTGGTTACAGAGCTAGCATCGA
ACCCACGGCGACCACCGTTGAGCCCCAATACCCCGGTCAACAGTTCGTGT
CCCTGAAGGTTGGATACTCGCACCCGATTGAGCTGGGTATTCCCCAGGGC
GTCAAGGCCAGCACACCCCAGCCGACTCGTATCCTGTTGGAGAGTGTGGA
CAAGCAGCTTGTGACCAAGTTCGCGGCGGAGATCCGCGAATGGCGCAAGC
CGGAACCTTACAAGGGCAAGGGTATCTTCGTCAACGGGGAGACGATCAAG
CTCAAGGACAAGAAGATTCGGTGAATGTCATGTTACTTGTCTCAGAGCTG
CTTTAGGCAGCTTGCGCGGAGTCCTTTGAGACAAGGACCTCTGCCCAACT
TCCTCGTCCCCGCTTTCTCTCACCCTCTTCGGACACAACCTTTCTCGACC
ACGTCCCCAGTACAATCGCGAGTTGGCGGCGCCGCGATCACCGTGCCCCC
GGAGGTGTCTCTGAAGTTCATCGACCTCCCTCAGCCTAAGACCAAGGCCA
AGTCGGTTGACTTCCCTAACATGGCCGTTGAGGTCAAAGGACCCCTGGGT
GAATTGTCGCTGAACATCCCTTCCTACGTGAAAATCGACTACGATGAAGC
CCTTCGGAAAGCCACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGC
GTGCTATGTGGGGAACCATGCGCGCCCACCTACAGAACCACATCCTCGGA
GTGTCAGAAGGTCACATTTGCATTCTGAGTTTCGTTGGTGTTGGTTACAG
AGCTAGCATCGAACCCACGGCGACCACCGTTGAGCCCCAATACCCCGGTC
AACAGTTCGTGTCCCTGAAGGTTGGATACTCGCACCCGATTGAGCTGGGT
ATTCCCCAGGGCGTCAAGGCCAGCACACCCCAGCCGACTCGTATCCTGTT
GGAGAGTGTGGACAAGCAGCTTGTGACCAAGTTCGCGGCGGAGATCCGCG
AATGGCGCAAGCCGGAACCTTACAAGGGCAAGGGTATCTTCGTCAACGGG
GAGACGATCAAGCTCAAGGACAAGAAGATTCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_299849M747DRAFT_299849Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299849-T1M747DRAFT_299849-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299849-T1.utr5p1M747DRAFT_299849-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299849-T1.exon1M747DRAFT_299849-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_299849-T1.exon2M747DRAFT_299849-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_299849-T1.exon3M747DRAFT_299849-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299849-T1.cdsM747DRAFT_299849-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299849-T1.utr3p1M747DRAFT_299849-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002358
DBxrefInterPro:IPR036789
DBxrefInterPro:IPR020040
DBxrefInterPro:IPR019906
DBxrefPFAM:PF00347
Productmitochondrial 54S ribosomal protein YmL16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851957.1supercontigKZ851957.1:99508..100611 +
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