You are here

Home

M747DRAFT_299929-T1, M747DRAFT_299929-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_299929-T1
Unique NameM747DRAFT_299929-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851959.1:46848..47850-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_299929-T1 ID=M747DRAFT_299929-T1|Name=M747DRAFT_299929-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1003bp|location=Sequence derived from alignment at KZ851959.1:46848..47850- (Aspergillus niger ATCC 13496)
CTCAAAACGAGCGACTTCTAGCGCTAGGTGGTGTAAGTTGAGCCACATAT
ATTCTTAAATTGTGTATGCTAACATTTAACGGGGCTCTGGTACGTTCCCT
GTTACTTGAGCATCAAATGTGAGCATGGTCTGCAAAATTACGTGACCCAT
GCTTGCACCACATACTTAGATATTTCTCTTTTGTATCTACTGCTACTGCT
CCTATTCGATGCTCGATCCTTAGTCTAAGAAGCTATAGTCTAATCATCGC
CATGGCTTCTCTAAGCAGGGACCTTGCAGGCCCCAGTTTCCCTGATAGTG
ATCTGCATCAGAGCGAACTTCGCACCGAGTCTCTGAAGACCCTTCAGCAG
TATACTATGTCTCCACCTTCAGGGAACCTTATAGACTATGATTGGGACCA
GCTCCAAGAAGAATATATCGCTTCTATGGAAAAGCATGAAAATGCTGAAA
AAGAATTACGCAACCGTGTCACCAAGTTGCTTGAGGTGCTTACAGACGTG
ATTGATCTCGTGGCCTTTATCTAATATTCTCTTTTAGATCTTCATGGCGT
GGTCGGAGACAACCATCATGCGCGATGAAATCAGAGCTTTAAAAAGGTTG
GCCCTCCAAAGTCCCCAGAGTTCTCAACATAATCATTGATGCTATTGTAG
ATTCAAGACACAAATGAAACATGTTCAAACATCTGAAGACGATCTAGAAC
TGAAACGTAAGCACTGTACGTAGTATCAGTCTCATCCAGAAACCCCTTTT
TATGTACATTGTTGCTGATGATGACTCAGATGTCGATGTTGTGAAGGCTT
TCGAGAGTGCCCTCGCGTTATTGAATGACCGCCTCAAGCCCTAAGATTTA
TCAAAAAGGGGTTCTTCGAGCTCTGCCCTTTATTTCTTACCACATACCAA
ACTTCAGATGATTACACATTACTGCAGGTTGTCATACAATGTAATTTATG
AAGCTTCACTCTTTCGTTCGCATAACAGTGGATAATTTTGACTGAAATGT
TAC
back to top

Coding sequence (CDS) from alignment at KZ851959.1:46848..47850-

>M747DRAFT_299929-T1 ID=M747DRAFT_299929-T1|Name=M747DRAFT_299929-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1692bp|location=Sequence derived from alignment at KZ851959.1:46848..47850- (Aspergillus niger ATCC 13496)
ATGTCGATGTTGTGAAGGCTTTCGAGAGTGCCCTCGCGTTATTGAATGAC
CGCCTCAAGCCCTAAATTCAAGACACAAATGAAACATGTTCAAACATCTG
AAGACGATCTAGAACTGAAACGTAAGCACTATCTTCATGGCGTGGTCGGA
GACAACCATCATGCGCGATGAAATCAGAGCTTTAAAAAGATGGCTTCTCT
AAGCAGGGACCTTGCAGGCCCCAGTTTCCCTGATAGTGATCTGCATCAGA
GCGAACTTCGCACCGAGTCTCTGAAGACCCTTCAGCAGTATACTATGTCT
CCACCTTCAGGGAACCTTATAGACTATGATTGGGACCAGCTCCAAGAAGA
ATATATCGCTTCTATGGAAAAGCATGAAAATGCTGAAAAAGAATTACGCA
ACCGTGTCACCAAGTTGCTTGAGATGTCGATGTTGTGAAGGCTTTCGAGA
GTGCCCTCGCGTTATTGAATGACCGCCTCAAGCCCTAAATTCAAGACACA
AATGAAACATGTTCAAACATCTGAAGACGATCTAGAACTGAAACGTAAGC
ACTATCTTCATGGCGTGGTCGGAGACAACCATCATGCGCGATGAAATCAG
AGCTTTAAAAAGATGGCTTCTCTAAGCAGGGACCTTGCAGGCCCCAGTTT
CCCTGATAGTGATCTGCATCAGAGCGAACTTCGCACCGAGTCTCTGAAGA
CCCTTCAGCAGTATACTATGTCTCCACCTTCAGGGAACCTTATAGACTAT
GATTGGGACCAGCTCCAAGAAGAATATATCGCTTCTATGGAAAAGCATGA
AAATGCTGAAAAAGAATTACGCAACCGTGTCACCAAGTTGCTTGAGATGT
CGATGTTGTGAAGGCTTTCGAGAGTGCCCTCGCGTTATTGAATGACCGCC
TCAAGCCCTAAATTCAAGACACAAATGAAACATGTTCAAACATCTGAAGA
CGATCTAGAACTGAAACGTAAGCACTATCTTCATGGCGTGGTCGGAGACA
ACCATCATGCGCGATGAAATCAGAGCTTTAAAAAGATGGCTTCTCTAAGC
AGGGACCTTGCAGGCCCCAGTTTCCCTGATAGTGATCTGCATCAGAGCGA
ACTTCGCACCGAGTCTCTGAAGACCCTTCAGCAGTATACTATGTCTCCAC
CTTCAGGGAACCTTATAGACTATGATTGGGACCAGCTCCAAGAAGAATAT
ATCGCTTCTATGGAAAAGCATGAAAATGCTGAAAAAGAATTACGCAACCG
TGTCACCAAGTTGCTTGAGATGTCGATGTTGTGAAGGCTTTCGAGAGTGC
CCTCGCGTTATTGAATGACCGCCTCAAGCCCTAAATTCAAGACACAAATG
AAACATGTTCAAACATCTGAAGACGATCTAGAACTGAAACGTAAGCACTA
TCTTCATGGCGTGGTCGGAGACAACCATCATGCGCGATGAAATCAGAGCT
TTAAAAAGATGGCTTCTCTAAGCAGGGACCTTGCAGGCCCCAGTTTCCCT
GATAGTGATCTGCATCAGAGCGAACTTCGCACCGAGTCTCTGAAGACCCT
TCAGCAGTATACTATGTCTCCACCTTCAGGGAACCTTATAGACTATGATT
GGGACCAGCTCCAAGAAGAATATATCGCTTCTATGGAAAAGCATGAAAAT
GCTGAAAAAGAATTACGCAACCGTGTCACCAAGTTGCTTGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_299929M747DRAFT_299929Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299929-T1M747DRAFT_299929-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299929-T1.cdsM747DRAFT_299929-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299929-T1.utr3p1M747DRAFT_299929-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299929-T1.exon6M747DRAFT_299929-T1.exon6Aspergillus niger ATCC 13496exon
M747DRAFT_299929-T1.exon5M747DRAFT_299929-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_299929-T1.exon4M747DRAFT_299929-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_299929-T1.exon3M747DRAFT_299929-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_299929-T1.exon2M747DRAFT_299929-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_299929-T1.exon1M747DRAFT_299929-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_299929-T1.utr5p3M747DRAFT_299929-T1.utr5p3Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_299929-T1.utr5p2M747DRAFT_299929-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_299929-T1.utr5p1M747DRAFT_299929-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851959.1supercontigKZ851959.1:46848..47850 -
Powered by Drupal