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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851964.1:94285..96928- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_300053-T1 ID=M747DRAFT_300053-T1|Name=M747DRAFT_300053-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2644bp|location=Sequence derived from alignment at KZ851964.1:94285..96928- (Aspergillus niger ATCC 13496)
CGTTGTTCATTATACCCTCTAAGCTCAGTATCTCGGGAATTCTTTCGCTT
AATTCCCTCCCTGAACGGTCTCCCCGCAGATGTCAGATCGCGACACTGCG
TCATGCTGGCTGTGGCCCCAACTAGCTGCTCTTGGCTCCCCCAGATTATC
GGGTCCCTGCTGTCTCTGAATTAGCCTGTCCTGGCCCACGCTGCCTTACA
GTCCGCTCCCCTCTCATCTCCTTCTAACTGTCTATTTCTCCGAGCAAGGT
CGGCCATGTGCGGAAATGAGTCCCAAGCGCCAGTCTTCTCCGACCACCCC
CCGGGCCTGTCAATTCTGTCGCGTCCGCAAGATCCGTTGTGACAACGAGA
AGCCCACCTGTGGCTCTTGTCAGCGTCATGATCGACAATGTGTCTATGTG
GTCGACCCACCCCGCCAGAGGTAGGTGTTCATCCCACCTGGACGCCTCTC
GCCATCCTTGGCTGCAATCATCTTGCCACGCATGCGCTGACGCTGCTGCT
TCAGGCCGTCCCGGGCTCTCATCAATGCCGCTCACCGCCAGAGGCGTGCG
GCGGAAAACGTGATTATTGCACTGAAGAAGGCTGATCCAGTTGCTCGAAC
TGCTATCCTTGACTCTATTCATGTCAAGGACGGAGTCCTGCAACTGCCGG
CATCATTGGCCAGCCTCGGTGCTAGTATCAACGACGTTCCGGTATCCCAA
CCCACCCAGGCCTCGGACAATAGCTCGAACGTGTACAGTACGCCCAATGA
CGAGTTGAATGAGAGTAGCTCCGAAGATGATGACTACGATCCCACCACCT
TTCTTTCCCGGGACGAATGCGGCACTGTCGGCATCTTTGGCCCGTCGTCG
GCGTTGCATGCCCGGAGCCCTCTCGGCCTAGCCAACAGTGCCAACTCACG
GCCTGCTGCAGAGCCAGACCGATATCAACTTATCGTCGAGGCCGCCCTCC
AGCGCCAACGTGAGCCTGATCTACGTCGTCTACCGACCATTGGAGGGATA
CCGTCCGAGTTGGCTTTGCATCTGCTCGATCTGCACTGGAACCGGCAGCA
TCACACATTCCTGCTAACATATCGTCCGGCATTTATGCGTGATCTCGTCA
CTGGCGGCCCGTACTGCTCGGACTTTTTGCTTAATGCCGTCTTCGCTTGT
TCGAGCAAGTTCTCGACACGCATTGAGGTGCGGGAAGACCCGCAACGGCC
CGAATCAGCTGGCAAACGGTTCTTCGATAGGTGTGATCAACTGCTGGCAG
AACAGTCGCTGTTGACGCATTCGAGCATCCCGACCATTGCCGGATTAATT
ATGCTTGGCAGCACCTTCAATGCCCGGGGACAGACTTCCAAAGGCTGGCT
CTACACAGGATTTGCTCTGCGCATGGTATACGACCTCGGCTTGCATCTGG
ACTGCAAGGAGGTTGCTGCCAGTGCGGAGGATATCGAGGTCCGACGCCGT
GTCTTTTGGGCAGCCTTTATCTGTGATAAGCTCCAGAGCTTGTATTTTGG
ACGACCTTTCACAATTCAGCTACGTGATGCGCATGTGTCGCGAGACTTCA
TGGATACCTTTGAAGAGAACGAGTTATGGACGCCGTATATCGACCCCCTC
AAGCCAGACAATACTGCCCGCTCTCACGTCCCCACTCGCATTTACTCCGT
GACCGTATTTCAGCAACTATGTTCTCTGTCTAAGATTATGACCAGCATTA
TTGACCGCTTCTACATGGCCGGTGCCACTGGTAGCAAGACACGCAAGCAT
CTGGAGCTTATTGACCGTCGTCTTGAGATTTGGTATCGTAAATTGCCGGC
GGAGCTGCGATTTGAGCCCTGGGCAGATGATGGCCAATCGCCGCACGCCA
CTGTAGCACCTAATGTCATTATCCTGCTAACTACCTACAATGCCCTCATC
ATTCTACTCCATCGTCCGTTCATGGGTAATGGGCATCTGCGCTCCGACGA
CCCGCCCGCGGACTCTTGGGAGCGTTGTGTCACGGCTGCCCGCAACATCA
CCAGCCTGGCGCTGGCCTATCGATCAGCCTACTCCCTGCGTCGAGCCAAC
TACATGCTCAGCTACGCGGTATATGTAGCCTGCACCATTCATGCGCGCAA
TCCGGCCATCCGAGAAAGCACACGCCGCAAGGAGGCGTCATCTCCACTGA
CAGTATGTTTACGTTGTTTGGACGAGCTGGCCATCCCCAATTGCGGCGTC
TCAGCGCCGTCGAAGATCATTCGCCGGCTCATGGAAGCCAACGGCATGTC
CATCCAGACTGGTAAGGAGCCTACGCACTTTTCAGCAAACCCCGAAGTCA
CTAACGACGTTCAGGATGTGACCCGGCTATTCAGGATCCCTTCCAGGTAG
ATATAAATTTAGATTTCCAAACCTTTCCCGGTCTGGATTTCAGCCCTGCG
CGACTCGATCATGCCAACCACATCTCTGGCTTCCAGGACTTCAATCAGGA
CCTGGACCTGCTGTTCGGGTTCATGAACGAGCCCGACGTGTCCATGTCCT
CCATGTTCACCGGGGTTGTACCCTATTAGCGACCTGTATATGGACCTCAC
TTTCGAATTAACTTCGAAATCAGAACCGACATTCAATCAAACACATAAAG
TACATAACATCATAAAAACATCATATCGTAACTGAATGAGCTCA back to topCoding sequence (CDS) from alignment at KZ851964.1:94285..96928- >M747DRAFT_300053-T1 ID=M747DRAFT_300053-T1|Name=M747DRAFT_300053-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6381bp|location=Sequence derived from alignment at KZ851964.1:94285..96928- (Aspergillus niger ATCC 13496)
GATGTGACCCGGCTATTCAGGATCCCTTCCAGGTAGATATAAATTTAGAT
TTCCAAACCTTTCCCGGTCTGGATTTCAGCCCTGCGCGACTCGATCATGC
CAACCACATCTCTGGCTTCCAGGACTTCAATCAGGACCTGGACCTGCTGT
TCGGGTTCATGAACGAGCCCGACGTGTCCATGTCCTCCATGTTCACCGGG
GTTGTACCCTATTAGGCCGTCCCGGGCTCTCATCAATGCCGCTCACCGCC
AGAGGCGTGCGGCGGAAAACGTGATTATTGCACTGAAGAAGGCTGATCCA
GTTGCTCGAACTGCTATCCTTGACTCTATTCATGTCAAGGACGGAGTCCT
GCAACTGCCGGCATCATTGGCCAGCCTCGGTGCTAGTATCAACGACGTTC
CGGTATCCCAACCCACCCAGGCCTCGGACAATAGCTCGAACGTGTACAGT
ACGCCCAATGACGAGTTGAATGAGAGTAGCTCCGAAGATGATGACTACGA
TCCCACCACCTTTCTTTCCCGGGACGAATGCGGCACTGTCGGCATCTTTG
GCCCGTCGTCGGCGTTGCATGCCCGGAGCCCTCTCGGCCTAGCCAACAGT
GCCAACTCACGGCCTGCTGCAGAGCCAGACCGATATCAACTTATCGTCGA
GGCCGCCCTCCAGCGCCAACGTGAGCCTGATCTACGTCGTCTACCGACCA
TTGGAGGGATACCGTCCGAGTTGGCTTTGCATCTGCTCGATCTGCACTGG
AACCGGCAGCATCACACATTCCTGCTAACATATCGTCCGGCATTTATGCG
TGATCTCGTCACTGGCGGCCCGTACTGCTCGGACTTTTTGCTTAATGCCG
TCTTCGCTTGTTCGAGCAAGTTCTCGACACGCATTGAGGTGCGGGAAGAC
CCGCAACGGCCCGAATCAGCTGGCAAACGGTTCTTCGATAGGTGTGATCA
ACTGCTGGCAGAACAGTCGCTGTTGACGCATTCGAGCATCCCGACCATTG
CCGGATTAATTATGCTTGGCAGCACCTTCAATGCCCGGGGACAGACTTCC
AAAGGCTGGCTCTACACAGGATTTGCTCTGCGCATGGTATACGACCTCGG
CTTGCATCTGGACTGCAAGGAGGTTGCTGCCAGTGCGGAGGATATCGAGG
TCCGACGCCGTGTCTTTTGGGCAGCCTTTATCTGTGATAAGCTCCAGAGC
TTGTATTTTGGACGACCTTTCACAATTCAGCTACGTGATGCGCATGTGTC
GCGAGACTTCATGGATACCTTTGAAGAGAACGAGTTATGGACGCCGTATA
TCGACCCCCTCAAGCCAGACAATACTGCCCGCTCTCACGTCCCCACTCGC
ATTTACTCCGTGACCGTATTTCAGCAACTATGTTCTCTGTCTAAGATTAT
GACCAGCATTATTGACCGCTTCTACATGGCCGGTGCCACTGGTAGCAAGA
CACGCAAGCATCTGGAGCTTATTGACCGTCGTCTTGAGATTTGGTATCGT
AAATTGCCGGCGGAGCTGCGATTTGAGCCCTGGGCAGATGATGGCCAATC
GCCGCACGCCACTGTAGCACCTAATGTCATTATCCTGCTAACTACCTACA
ATGCCCTCATCATTCTACTCCATCGTCCGTTCATGGGTAATGGGCATCTG
CGCTCCGACGACCCGCCCGCGGACTCTTGGGAGCGTTGTGTCACGGCTGC
CCGCAACATCACCAGCCTGGCGCTGGCCTATCGATCAGCCTACTCCCTGC
GTCGAGCCAACTACATGCTCAGCTACGCGGTATATGTAGCCTGCACCATT
CATGCGCGCAATCCGGCCATCCGAGAAAGCACACGCCGCAAGGAGGCGTC
ATCTCCACTGACAGTATGTTTACGTTGTTTGGACGAGCTGGCCATCCCCA
ATTGCGGCGTCTCAGCGCCGTCGAAGATCATTCGCCGGCTCATGGAAGCC
AACGGCATGTCCATCCAGACTGATGAGTCCCAAGCGCCAGTCTTCTCCGA
CCACCCCCCGGGCCTGTCAATTCTGTCGCGTCCGCAAGATCCGTTGTGAC
AACGAGAAGCCCACCTGTGGCTCTTGTCAGCGTCATGATCGACAATGTGT
CTATGTGGTCGACCCACCCCGCCAGAGGATGTGACCCGGCTATTCAGGAT
CCCTTCCAGGTAGATATAAATTTAGATTTCCAAACCTTTCCCGGTCTGGA
TTTCAGCCCTGCGCGACTCGATCATGCCAACCACATCTCTGGCTTCCAGG
ACTTCAATCAGGACCTGGACCTGCTGTTCGGGTTCATGAACGAGCCCGAC
GTGTCCATGTCCTCCATGTTCACCGGGGTTGTACCCTATTAGGCCGTCCC
GGGCTCTCATCAATGCCGCTCACCGCCAGAGGCGTGCGGCGGAAAACGTG
ATTATTGCACTGAAGAAGGCTGATCCAGTTGCTCGAACTGCTATCCTTGA
CTCTATTCATGTCAAGGACGGAGTCCTGCAACTGCCGGCATCATTGGCCA
GCCTCGGTGCTAGTATCAACGACGTTCCGGTATCCCAACCCACCCAGGCC
TCGGACAATAGCTCGAACGTGTACAGTACGCCCAATGACGAGTTGAATGA
GAGTAGCTCCGAAGATGATGACTACGATCCCACCACCTTTCTTTCCCGGG
ACGAATGCGGCACTGTCGGCATCTTTGGCCCGTCGTCGGCGTTGCATGCC
CGGAGCCCTCTCGGCCTAGCCAACAGTGCCAACTCACGGCCTGCTGCAGA
GCCAGACCGATATCAACTTATCGTCGAGGCCGCCCTCCAGCGCCAACGTG
AGCCTGATCTACGTCGTCTACCGACCATTGGAGGGATACCGTCCGAGTTG
GCTTTGCATCTGCTCGATCTGCACTGGAACCGGCAGCATCACACATTCCT
GCTAACATATCGTCCGGCATTTATGCGTGATCTCGTCACTGGCGGCCCGT
ACTGCTCGGACTTTTTGCTTAATGCCGTCTTCGCTTGTTCGAGCAAGTTC
TCGACACGCATTGAGGTGCGGGAAGACCCGCAACGGCCCGAATCAGCTGG
CAAACGGTTCTTCGATAGGTGTGATCAACTGCTGGCAGAACAGTCGCTGT
TGACGCATTCGAGCATCCCGACCATTGCCGGATTAATTATGCTTGGCAGC
ACCTTCAATGCCCGGGGACAGACTTCCAAAGGCTGGCTCTACACAGGATT
TGCTCTGCGCATGGTATACGACCTCGGCTTGCATCTGGACTGCAAGGAGG
TTGCTGCCAGTGCGGAGGATATCGAGGTCCGACGCCGTGTCTTTTGGGCA
GCCTTTATCTGTGATAAGCTCCAGAGCTTGTATTTTGGACGACCTTTCAC
AATTCAGCTACGTGATGCGCATGTGTCGCGAGACTTCATGGATACCTTTG
AAGAGAACGAGTTATGGACGCCGTATATCGACCCCCTCAAGCCAGACAAT
ACTGCCCGCTCTCACGTCCCCACTCGCATTTACTCCGTGACCGTATTTCA
GCAACTATGTTCTCTGTCTAAGATTATGACCAGCATTATTGACCGCTTCT
ACATGGCCGGTGCCACTGGTAGCAAGACACGCAAGCATCTGGAGCTTATT
GACCGTCGTCTTGAGATTTGGTATCGTAAATTGCCGGCGGAGCTGCGATT
TGAGCCCTGGGCAGATGATGGCCAATCGCCGCACGCCACTGTAGCACCTA
ATGTCATTATCCTGCTAACTACCTACAATGCCCTCATCATTCTACTCCAT
CGTCCGTTCATGGGTAATGGGCATCTGCGCTCCGACGACCCGCCCGCGGA
CTCTTGGGAGCGTTGTGTCACGGCTGCCCGCAACATCACCAGCCTGGCGC
TGGCCTATCGATCAGCCTACTCCCTGCGTCGAGCCAACTACATGCTCAGC
TACGCGGTATATGTAGCCTGCACCATTCATGCGCGCAATCCGGCCATCCG
AGAAAGCACACGCCGCAAGGAGGCGTCATCTCCACTGACAGTATGTTTAC
GTTGTTTGGACGAGCTGGCCATCCCCAATTGCGGCGTCTCAGCGCCGTCG
AAGATCATTCGCCGGCTCATGGAAGCCAACGGCATGTCCATCCAGACTGA
TGAGTCCCAAGCGCCAGTCTTCTCCGACCACCCCCCGGGCCTGTCAATTC
TGTCGCGTCCGCAAGATCCGTTGTGACAACGAGAAGCCCACCTGTGGCTC
TTGTCAGCGTCATGATCGACAATGTGTCTATGTGGTCGACCCACCCCGCC
AGAGGATGTGACCCGGCTATTCAGGATCCCTTCCAGGTAGATATAAATTT
AGATTTCCAAACCTTTCCCGGTCTGGATTTCAGCCCTGCGCGACTCGATC
ATGCCAACCACATCTCTGGCTTCCAGGACTTCAATCAGGACCTGGACCTG
CTGTTCGGGTTCATGAACGAGCCCGACGTGTCCATGTCCTCCATGTTCAC
CGGGGTTGTACCCTATTAGGCCGTCCCGGGCTCTCATCAATGCCGCTCAC
CGCCAGAGGCGTGCGGCGGAAAACGTGATTATTGCACTGAAGAAGGCTGA
TCCAGTTGCTCGAACTGCTATCCTTGACTCTATTCATGTCAAGGACGGAG
TCCTGCAACTGCCGGCATCATTGGCCAGCCTCGGTGCTAGTATCAACGAC
GTTCCGGTATCCCAACCCACCCAGGCCTCGGACAATAGCTCGAACGTGTA
CAGTACGCCCAATGACGAGTTGAATGAGAGTAGCTCCGAAGATGATGACT
ACGATCCCACCACCTTTCTTTCCCGGGACGAATGCGGCACTGTCGGCATC
TTTGGCCCGTCGTCGGCGTTGCATGCCCGGAGCCCTCTCGGCCTAGCCAA
CAGTGCCAACTCACGGCCTGCTGCAGAGCCAGACCGATATCAACTTATCG
TCGAGGCCGCCCTCCAGCGCCAACGTGAGCCTGATCTACGTCGTCTACCG
ACCATTGGAGGGATACCGTCCGAGTTGGCTTTGCATCTGCTCGATCTGCA
CTGGAACCGGCAGCATCACACATTCCTGCTAACATATCGTCCGGCATTTA
TGCGTGATCTCGTCACTGGCGGCCCGTACTGCTCGGACTTTTTGCTTAAT
GCCGTCTTCGCTTGTTCGAGCAAGTTCTCGACACGCATTGAGGTGCGGGA
AGACCCGCAACGGCCCGAATCAGCTGGCAAACGGTTCTTCGATAGGTGTG
ATCAACTGCTGGCAGAACAGTCGCTGTTGACGCATTCGAGCATCCCGACC
ATTGCCGGATTAATTATGCTTGGCAGCACCTTCAATGCCCGGGGACAGAC
TTCCAAAGGCTGGCTCTACACAGGATTTGCTCTGCGCATGGTATACGACC
TCGGCTTGCATCTGGACTGCAAGGAGGTTGCTGCCAGTGCGGAGGATATC
GAGGTCCGACGCCGTGTCTTTTGGGCAGCCTTTATCTGTGATAAGCTCCA
GAGCTTGTATTTTGGACGACCTTTCACAATTCAGCTACGTGATGCGCATG
TGTCGCGAGACTTCATGGATACCTTTGAAGAGAACGAGTTATGGACGCCG
TATATCGACCCCCTCAAGCCAGACAATACTGCCCGCTCTCACGTCCCCAC
TCGCATTTACTCCGTGACCGTATTTCAGCAACTATGTTCTCTGTCTAAGA
TTATGACCAGCATTATTGACCGCTTCTACATGGCCGGTGCCACTGGTAGC
AAGACACGCAAGCATCTGGAGCTTATTGACCGTCGTCTTGAGATTTGGTA
TCGTAAATTGCCGGCGGAGCTGCGATTTGAGCCCTGGGCAGATGATGGCC
AATCGCCGCACGCCACTGTAGCACCTAATGTCATTATCCTGCTAACTACC
TACAATGCCCTCATCATTCTACTCCATCGTCCGTTCATGGGTAATGGGCA
TCTGCGCTCCGACGACCCGCCCGCGGACTCTTGGGAGCGTTGTGTCACGG
CTGCCCGCAACATCACCAGCCTGGCGCTGGCCTATCGATCAGCCTACTCC
CTGCGTCGAGCCAACTACATGCTCAGCTACGCGGTATATGTAGCCTGCAC
CATTCATGCGCGCAATCCGGCCATCCGAGAAAGCACACGCCGCAAGGAGG
CGTCATCTCCACTGACAGTATGTTTACGTTGTTTGGACGAGCTGGCCATC
CCCAATTGCGGCGTCTCAGCGCCGTCGAAGATCATTCGCCGGCTCATGGA
AGCCAACGGCATGTCCATCCAGACTGATGAGTCCCAAGCGCCAGTCTTCT
CCGACCACCCCCCGGGCCTGTCAATTCTGTCGCGTCCGCAAGATCCGTTG
TGACAACGAGAAGCCCACCTGTGGCTCTTGTCAGCGTCATGATCGACAAT
GTGTCTATGTGGTCGACCCACCCCGCCAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | nitrogen assimilation transcription factor NirA |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851964.1 | supercontig | KZ851964.1:94285..96928 - |
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