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M747DRAFT_300059-T1, M747DRAFT_300059-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_300059-T1
Unique NameM747DRAFT_300059-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851965.1:11568..12887+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_300059-T1 ID=M747DRAFT_300059-T1|Name=M747DRAFT_300059-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1320bp|location=Sequence derived from alignment at KZ851965.1:11568..12887+ (Aspergillus niger ATCC 13496)
CTGCCTATCCTGTCTGCTTTCCATCCAGTTGCATCTCTGTCTGTCCTTCA
GATATACCGGTTTTGATTTTCGAGCTGATACTGGTTCATTCTCTAATAGA
CCGTGTCATTTACTCCGTTGATTGTCCCAATCTCGTTTCCCGGAGCAGCA
CGGGCGCCGCCAGCCACCACGGAAGATAAGGTGGCTATTCCGTACTACTC
TCTCCACTTACTTGGATCCGCAACCCCTATCCACTGATTAATCCGGCTGT
GAAACATAACCAGAGTCTCTTTAACCTACGCAAACCCCTCACCTAATATC
ATAATGTCGAACCCGTTGGACACCGACGCCGGCTCGGAGCTCTTCAGCAG
CTACGAGACCGAGCTAAAGCTGGTGCAAGCCGATCTGAATCAGAAGTTGG
ACCAGATCGCCGAGTCAAGCGGTGAACAACGAAAGTCAGCAATTAGGCAA
GCCGAGAGAGCCCTGGATGAAGCCACGGAATTGGTATGTTGGACGCATTT
GGCGAGAAGCGCGCCCCGCGTCAATTTTCCACTAACAGGCGGGAATACAG
CTAGATCAAATGCGCATGGAGAAGCAGAACATCCCCTCAGCAGCACGATC
GAAGATCAACACGCGCGTTCGCAACTACGCTACCGATATCGACGAGGCCA
AACGCAAGTTGAGGTCTCTTTCCGATGACCGCAAGGCGCTCTTCGGCGAC
CGCTACACAGATGATCCGCAGGACGAACATCTGGAACAAAGGCAACAGCT
CCTGTCTGGTACGGAGCGGTTGGAGCGGAGTTCCGCCCGGCTCCAGGAGA
GTCAGCGCATCGCCCTCGAGACGGAGGATATTGGTCGCAACACCTTGGCC
GACTTGAACCAGCAGCGCGAGACGATCATGAATGCGCGGGGTCGGCTGCT
CGAGAGCGAAGGATATGTAGACACCAGTATCAAGACACTAAGGGGCATGG
CCCGTAGGTACTGTCCCCCTAACACTCAAGGACATTTGCTTCGCTACTTG
TCACAGCTGCTTGACTGCTCAAATGCTTACTGTATTCTAGGATGGCTACG
AATCGGTTGATCACAATTGCAATCATCACTGTCTTGATCCTGTTGATTTT
TGCCGTTATCTACAGCAAGTTCCATTGAGCATGGGTTTGGAAGGCGTTAT
TACCGGTGGCCTCTCTTTCATTTTTTCCCCCTCTTAACGACACTTATAAG
TCTGCAGTCGCAGACACATCACGCAATGTTGTATGATAGCAACCCATCAG
CTTTAATCAGGCGCCATGTTACATGTTCTAGTATATCTCACATACAACCG
TTCACGATCCGGGCCCTATG
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Coding sequence (CDS) from alignment at KZ851965.1:11568..12887+

>M747DRAFT_300059-T1 ID=M747DRAFT_300059-T1|Name=M747DRAFT_300059-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2025bp|location=Sequence derived from alignment at KZ851965.1:11568..12887+ (Aspergillus niger ATCC 13496)
ATGTCGAACCCGTTGGACACCGACGCCGGCTCGGAGCTCTTCAGCAGCTA
CGAGACCGAGCTAAAGCTGGTGCAAGCCGATCTGAATCAGAAGTTGGACC
AGATCGCCGAGTCAAGCGGTGAACAACGAAAGTCAGCAATTAGGCAAGCC
GAGAGAGCCCTGGATGAAGCCACGGAATTGCTAGATCAAATGCGCATGGA
GAAGCAGAACATCCCCTCAGCAGCACGATCGAAGATCAACACGCGCGTTC
GCAACTACGCTACCGATATCGACGAGGCCAAACGCAAGTTGAGGTCTCTT
TCCGATGACCGCAAGGCGCTCTTCGGCGACCGCTACACAGATGATCCGCA
GGACGAACATCTGGAACAAAGGCAACAGCTCCTGTCTGGTACGGAGCGGT
TGGAGCGGAGTTCCGCCCGGCTCCAGGAGAGTCAGCGCATCGCCCTCGAG
ACGGAGGATATTGGTCGCAACACCTTGGCCGACTTGAACCAGCAGCGCGA
GACGATCATGAATGCGCGGGGTCGGCTGCTCGAGAGCGAAGGATATGTAG
ACACCAGTATCAAGACACTAAGGGGCATGGCCCGTAGGATGGCTACGAAT
CGGTTGATCACAATTGCAATCATCACTGTCTTGATCCTGTTGATTTTTGC
CGTTATCTACAGCAAGTTCCATTGAATGTCGAACCCGTTGGACACCGACG
CCGGCTCGGAGCTCTTCAGCAGCTACGAGACCGAGCTAAAGCTGGTGCAA
GCCGATCTGAATCAGAAGTTGGACCAGATCGCCGAGTCAAGCGGTGAACA
ACGAAAGTCAGCAATTAGGCAAGCCGAGAGAGCCCTGGATGAAGCCACGG
AATTGCTAGATCAAATGCGCATGGAGAAGCAGAACATCCCCTCAGCAGCA
CGATCGAAGATCAACACGCGCGTTCGCAACTACGCTACCGATATCGACGA
GGCCAAACGCAAGTTGAGGTCTCTTTCCGATGACCGCAAGGCGCTCTTCG
GCGACCGCTACACAGATGATCCGCAGGACGAACATCTGGAACAAAGGCAA
CAGCTCCTGTCTGGTACGGAGCGGTTGGAGCGGAGTTCCGCCCGGCTCCA
GGAGAGTCAGCGCATCGCCCTCGAGACGGAGGATATTGGTCGCAACACCT
TGGCCGACTTGAACCAGCAGCGCGAGACGATCATGAATGCGCGGGGTCGG
CTGCTCGAGAGCGAAGGATATGTAGACACCAGTATCAAGACACTAAGGGG
CATGGCCCGTAGGATGGCTACGAATCGGTTGATCACAATTGCAATCATCA
CTGTCTTGATCCTGTTGATTTTTGCCGTTATCTACAGCAAGTTCCATTGA
ATGTCGAACCCGTTGGACACCGACGCCGGCTCGGAGCTCTTCAGCAGCTA
CGAGACCGAGCTAAAGCTGGTGCAAGCCGATCTGAATCAGAAGTTGGACC
AGATCGCCGAGTCAAGCGGTGAACAACGAAAGTCAGCAATTAGGCAAGCC
GAGAGAGCCCTGGATGAAGCCACGGAATTGCTAGATCAAATGCGCATGGA
GAAGCAGAACATCCCCTCAGCAGCACGATCGAAGATCAACACGCGCGTTC
GCAACTACGCTACCGATATCGACGAGGCCAAACGCAAGTTGAGGTCTCTT
TCCGATGACCGCAAGGCGCTCTTCGGCGACCGCTACACAGATGATCCGCA
GGACGAACATCTGGAACAAAGGCAACAGCTCCTGTCTGGTACGGAGCGGT
TGGAGCGGAGTTCCGCCCGGCTCCAGGAGAGTCAGCGCATCGCCCTCGAG
ACGGAGGATATTGGTCGCAACACCTTGGCCGACTTGAACCAGCAGCGCGA
GACGATCATGAATGCGCGGGGTCGGCTGCTCGAGAGCGAAGGATATGTAG
ACACCAGTATCAAGACACTAAGGGGCATGGCCCGTAGGATGGCTACGAAT
CGGTTGATCACAATTGCAATCATCACTGTCTTGATCCTGTTGATTTTTGC
CGTTATCTACAGCAAGTTCCATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_300059M747DRAFT_300059Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300059-T1M747DRAFT_300059-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300059-T1.utr5p1M747DRAFT_300059-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300059-T1.exon1M747DRAFT_300059-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_300059-T1.exon2M747DRAFT_300059-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_300059-T1.exon3M747DRAFT_300059-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300059-T1.cdsM747DRAFT_300059-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300059-T1.utr3p1M747DRAFT_300059-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264R4M
DBxrefInterPro:IPR010989
DBxrefInterPro:IPR038407
DBxrefInterPro:IPR007705
DBxrefInterPro:IPR000727
DBxrefPFAM:PF12352
DBxrefPFAM:PF05008
ProductV-snare-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851965.1supercontigKZ851965.1:11568..12887 +
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