You are here

Home

M747DRAFT_300066-T1, M747DRAFT_300066-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_300066-T1
Unique NameM747DRAFT_300066-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851965.1:36004..37477-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_300066-T1 ID=M747DRAFT_300066-T1|Name=M747DRAFT_300066-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1474bp|location=Sequence derived from alignment at KZ851965.1:36004..37477- (Aspergillus niger ATCC 13496)
ATTCTTATCGATAAAGTGCGGCCTCCTCTCCTGACTTTGCCAGTTCCGCT
CACTGTACATTGTCCACTGTCCTCCTCGTTACGCGCGCAATCTTAGAGAA
GAAGCATTTTTCGGCATGGCAGCCGTAATGACACCTTTCCCTTAGGCACC
ACACACACCCTTCGCTAACCGCCGGGCAGCATGGGATTCCCCGCTACTCG
CTCCAAGGCGAGCAGACCGAAGAAGGTCGGCAGAAAGAACTTCAGAAAAT
CGAGAAATATCGCCAGCTTGATCAATCGGTCCGCGAGAAGGTAGACCACA
TGCAAGAAACAAGCTATCGCCAGCGCTAGCTGATGGTGATTAACTAGATC
GCGGAACAACAATATACGCCAGAGACTCTAGAGAAAATAGCCGAACTACT
GACCAGCAACCCGGAGTACTATACCGTTTGGAATTATCGGCGCCAGGTGT
TGCGCAATGAATTCTCACGAGCAGCTTCAGCTGGCTCAAACGAAGCAGCT
GCTGAGCAGATTGCGACACTAATCAAGAATGACCTACTATTCACGGTTCC
CCTCCTGCGTAGCTTTCCCAAATGCTACTGGATATGGAACTACCGTACTT
GGCTGTTGGATGAAGCCAAGCGTCTGCTTCCAGTACCTGCTGCGCAAAAA
TTCTGGCAGGAAGAACTGGGACTGGTAGGGAAGATGCTTACCCTAGACAG
CAGAAACTTCCACGGCTGGGGTTACAGACGCTTTGTCGTAGAGACGCTGC
GAGAGCTCAAATCGGAGGAGCAGGAAGGGCAACAGATGACGCAGACAGAG
TACGAATATGCAAAGAAGATGATTGGCGCTAACCTCTCCAACTTCTCGGC
CTGGCATTATCGCACGAAACTCATTCAGCGCATGTTGAACGAGAAATCCG
CTAGCGACGTGGAGCGAAAAGCGATGCTTGACAATGGTACGTCATCCCCT
TTGTCATCTGCGTGGCCTGGAGACAGCGTACGAGTATGTGTGTTGACATA
TCATACTGGAAGAATTGGACTTGATCCATCGTGCCCTGTGTGACCCGTAT
GACCAGTCATTATGGTTCTATCATCAAAACCTAATGTGCGTCTTTGATCC
ATCCGTGGCGGACCAGACGCTGGCACCGCACTTGAGTGATGCCGAACGCC
TCGATTACCTGCGACAGGAAATCGACGAGATTCAAGAGATGTTGGATGGA
GCTGAGGATTGCAAGTATATTTACCAAGCATTGATCGATTGTACGATGTT
GGCCTGGAAGGTGGAGGGAAATGCGCCCAGTGGAGAGACGAAAAAGAAGG
TCCAGCATTGGCTGTCGGAATTGAAGAAGCTGGACCCGCTGCGACTCCAA
CGGTGGCTGGATTTGGAACACTCCCTCAGCCGCTGAGCCAGTCACCACCC
CTTACCGATGCGATATGTATAGTAATCTATAGACGCCATCTGCGGGGGGA
ATAATTTTTTGCTTTGTTTAATGG
back to top

Coding sequence (CDS) from alignment at KZ851965.1:36004..37477-

>M747DRAFT_300066-T1 ID=M747DRAFT_300066-T1|Name=M747DRAFT_300066-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4332bp|location=Sequence derived from alignment at KZ851965.1:36004..37477- (Aspergillus niger ATCC 13496)
AATTGGACTTGATCCATCGTGCCCTGTGTGACCCGTATGACCAGTCATTA
TGGTTCTATCATCAAAACCTAATGTGCGTCTTTGATCCATCCGTGGCGGA
CCAGACGCTGGCACCGCACTTGAGTGATGCCGAACGCCTCGATTACCTGC
GACAGGAAATCGACGAGATTCAAGAGATGTTGGATGGAGCTGAGGATTGC
AAGTATATTTACCAAGCATTGATCGATTGTACGATGTTGGCCTGGAAGGT
GGAGGGAAATGCGCCCAGTGGAGAGACGAAAAAGAAGGTCCAGCATTGGC
TGTCGGAATTGAAGAAGCTGGACCCGCTGCGACTCCAACGGTGGCTGGAT
TTGGAACACTCCCTCAGCCGCTGAATCGCGGAACAACAATATACGCCAGA
GACTCTAGAGAAAATAGCCGAACTACTGACCAGCAACCCGGAGTACTATA
CCGTTTGGAATTATCGGCGCCAGGTGTTGCGCAATGAATTCTCACGAGCA
GCTTCAGCTGGCTCAAACGAAGCAGCTGCTGAGCAGATTGCGACACTAAT
CAAGAATGACCTACTATTCACGGTTCCCCTCCTGCGTAGCTTTCCCAAAT
GCTACTGGATATGGAACTACCGTACTTGGCTGTTGGATGAAGCCAAGCGT
CTGCTTCCAGTACCTGCTGCGCAAAAATTCTGGCAGGAAGAACTGGGACT
GGTAGGGAAGATGCTTACCCTAGACAGCAGAAACTTCCACGGCTGGGGTT
ACAGACGCTTTGTCGTAGAGACGCTGCGAGAGCTCAAATCGGAGGAGCAG
GAAGGGCAACAGATGACGCAGACAGAGTACGAATATGCAAAGAAGATGAT
TGGCGCTAACCTCTCCAACTTCTCGGCCTGGCATTATCGCACGAAACTCA
TTCAGCGCATGTTGAACGAGAAATCCGCTAGCGACGTGGAGCGAAAAGCG
ATGCTTGACAATGCATGGGATTCCCCGCTACTCGCTCCAAGGCGAGCAGA
CCGAAGAAGGTCGGCAGAAAGAACTTCAGAAAATCGAGAAATATCGCCAG
CTTGATCAATCGGTCCGCGAGAAGATGGCAGCCAATTGGACTTGATCCAT
CGTGCCCTGTGTGACCCGTATGACCAGTCATTATGGTTCTATCATCAAAA
CCTAATGTGCGTCTTTGATCCATCCGTGGCGGACCAGACGCTGGCACCGC
ACTTGAGTGATGCCGAACGCCTCGATTACCTGCGACAGGAAATCGACGAG
ATTCAAGAGATGTTGGATGGAGCTGAGGATTGCAAGTATATTTACCAAGC
ATTGATCGATTGTACGATGTTGGCCTGGAAGGTGGAGGGAAATGCGCCCA
GTGGAGAGACGAAAAAGAAGGTCCAGCATTGGCTGTCGGAATTGAAGAAG
CTGGACCCGCTGCGACTCCAACGGTGGCTGGATTTGGAACACTCCCTCAG
CCGCTGAATCGCGGAACAACAATATACGCCAGAGACTCTAGAGAAAATAG
CCGAACTACTGACCAGCAACCCGGAGTACTATACCGTTTGGAATTATCGG
CGCCAGGTGTTGCGCAATGAATTCTCACGAGCAGCTTCAGCTGGCTCAAA
CGAAGCAGCTGCTGAGCAGATTGCGACACTAATCAAGAATGACCTACTAT
TCACGGTTCCCCTCCTGCGTAGCTTTCCCAAATGCTACTGGATATGGAAC
TACCGTACTTGGCTGTTGGATGAAGCCAAGCGTCTGCTTCCAGTACCTGC
TGCGCAAAAATTCTGGCAGGAAGAACTGGGACTGGTAGGGAAGATGCTTA
CCCTAGACAGCAGAAACTTCCACGGCTGGGGTTACAGACGCTTTGTCGTA
GAGACGCTGCGAGAGCTCAAATCGGAGGAGCAGGAAGGGCAACAGATGAC
GCAGACAGAGTACGAATATGCAAAGAAGATGATTGGCGCTAACCTCTCCA
ACTTCTCGGCCTGGCATTATCGCACGAAACTCATTCAGCGCATGTTGAAC
GAGAAATCCGCTAGCGACGTGGAGCGAAAAGCGATGCTTGACAATGCATG
GGATTCCCCGCTACTCGCTCCAAGGCGAGCAGACCGAAGAAGGTCGGCAG
AAAGAACTTCAGAAAATCGAGAAATATCGCCAGCTTGATCAATCGGTCCG
CGAGAAGATGGCAGCCAATTGGACTTGATCCATCGTGCCCTGTGTGACCC
GTATGACCAGTCATTATGGTTCTATCATCAAAACCTAATGTGCGTCTTTG
ATCCATCCGTGGCGGACCAGACGCTGGCACCGCACTTGAGTGATGCCGAA
CGCCTCGATTACCTGCGACAGGAAATCGACGAGATTCAAGAGATGTTGGA
TGGAGCTGAGGATTGCAAGTATATTTACCAAGCATTGATCGATTGTACGA
TGTTGGCCTGGAAGGTGGAGGGAAATGCGCCCAGTGGAGAGACGAAAAAG
AAGGTCCAGCATTGGCTGTCGGAATTGAAGAAGCTGGACCCGCTGCGACT
CCAACGGTGGCTGGATTTGGAACACTCCCTCAGCCGCTGAATCGCGGAAC
AACAATATACGCCAGAGACTCTAGAGAAAATAGCCGAACTACTGACCAGC
AACCCGGAGTACTATACCGTTTGGAATTATCGGCGCCAGGTGTTGCGCAA
TGAATTCTCACGAGCAGCTTCAGCTGGCTCAAACGAAGCAGCTGCTGAGC
AGATTGCGACACTAATCAAGAATGACCTACTATTCACGGTTCCCCTCCTG
CGTAGCTTTCCCAAATGCTACTGGATATGGAACTACCGTACTTGGCTGTT
GGATGAAGCCAAGCGTCTGCTTCCAGTACCTGCTGCGCAAAAATTCTGGC
AGGAAGAACTGGGACTGGTAGGGAAGATGCTTACCCTAGACAGCAGAAAC
TTCCACGGCTGGGGTTACAGACGCTTTGTCGTAGAGACGCTGCGAGAGCT
CAAATCGGAGGAGCAGGAAGGGCAACAGATGACGCAGACAGAGTACGAAT
ATGCAAAGAAGATGATTGGCGCTAACCTCTCCAACTTCTCGGCCTGGCAT
TATCGCACGAAACTCATTCAGCGCATGTTGAACGAGAAATCCGCTAGCGA
CGTGGAGCGAAAAGCGATGCTTGACAATGCATGGGATTCCCCGCTACTCG
CTCCAAGGCGAGCAGACCGAAGAAGGTCGGCAGAAAGAACTTCAGAAAAT
CGAGAAATATCGCCAGCTTGATCAATCGGTCCGCGAGAAGATGGCAGCCA
ATTGGACTTGATCCATCGTGCCCTGTGTGACCCGTATGACCAGTCATTAT
GGTTCTATCATCAAAACCTAATGTGCGTCTTTGATCCATCCGTGGCGGAC
CAGACGCTGGCACCGCACTTGAGTGATGCCGAACGCCTCGATTACCTGCG
ACAGGAAATCGACGAGATTCAAGAGATGTTGGATGGAGCTGAGGATTGCA
AGTATATTTACCAAGCATTGATCGATTGTACGATGTTGGCCTGGAAGGTG
GAGGGAAATGCGCCCAGTGGAGAGACGAAAAAGAAGGTCCAGCATTGGCT
GTCGGAATTGAAGAAGCTGGACCCGCTGCGACTCCAACGGTGGCTGGATT
TGGAACACTCCCTCAGCCGCTGAATCGCGGAACAACAATATACGCCAGAG
ACTCTAGAGAAAATAGCCGAACTACTGACCAGCAACCCGGAGTACTATAC
CGTTTGGAATTATCGGCGCCAGGTGTTGCGCAATGAATTCTCACGAGCAG
CTTCAGCTGGCTCAAACGAAGCAGCTGCTGAGCAGATTGCGACACTAATC
AAGAATGACCTACTATTCACGGTTCCCCTCCTGCGTAGCTTTCCCAAATG
CTACTGGATATGGAACTACCGTACTTGGCTGTTGGATGAAGCCAAGCGTC
TGCTTCCAGTACCTGCTGCGCAAAAATTCTGGCAGGAAGAACTGGGACTG
GTAGGGAAGATGCTTACCCTAGACAGCAGAAACTTCCACGGCTGGGGTTA
CAGACGCTTTGTCGTAGAGACGCTGCGAGAGCTCAAATCGGAGGAGCAGG
AAGGGCAACAGATGACGCAGACAGAGTACGAATATGCAAAGAAGATGATT
GGCGCTAACCTCTCCAACTTCTCGGCCTGGCATTATCGCACGAAACTCAT
TCAGCGCATGTTGAACGAGAAATCCGCTAGCGACGTGGAGCGAAAAGCGA
TGCTTGACAATGCATGGGATTCCCCGCTACTCGCTCCAAGGCGAGCAGAC
CGAAGAAGGTCGGCAGAAAGAACTTCAGAAAATCGAGAAATATCGCCAGC
TTGATCAATCGGTCCGCGAGAAGATGGCAGCC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0018342protein prenylation
Vocabulary: Molecular Function
TermDefinition
GO:0008318protein prenyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_300066M747DRAFT_300066Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300066-T1M747DRAFT_300066-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300066-T1.cdsM747DRAFT_300066-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300066-T1.utr3p1M747DRAFT_300066-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300066-T1.exon4M747DRAFT_300066-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_300066-T1.exon3M747DRAFT_300066-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_300066-T1.exon2M747DRAFT_300066-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_300066-T1.exon1M747DRAFT_300066-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300066-T1.utr5p1M747DRAFT_300066-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002088
DBxrefPFAM:PF01239
Productgeranylgeranyl transferase type II alpha subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851965.1supercontigKZ851965.1:36004..37477 -
Powered by Drupal