You are here

Home

M747DRAFT_300106-T1, M747DRAFT_300106-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_300106-T1
Unique NameM747DRAFT_300106-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851967.1:12940..14185-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_300106-T1 ID=M747DRAFT_300106-T1|Name=M747DRAFT_300106-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1246bp|location=Sequence derived from alignment at KZ851967.1:12940..14185- (Aspergillus niger ATCC 13496)
CCTTTGATGCGAAGGCGCTCGGAAGTGTTATTTGTCAATCATTGCGGTCA
CTCCCTCTTCAATTCGTGAGAATGCCTCCCCGCATTCTACTCCAGCCTTC
ATTGAGGGCCCTCACAGGTAAATACTATCTTGTTGCTCCTCCCTCCTGAT
TCGCGCCTAGTAACTCACCGGGTTGTCGTTATCCCAGGCCCTTCCTCCGT
GCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCGAAAACCTCCGTAA
GAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCATGACCCTTTCCTT
ATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCTCTCGCCAGAAAGC
CCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCCGTCCAAAGCGAAC
CTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGCGACTTTGCAGGAC
ACAGACCTCAATTACTTCGTCACACCGGATGGTCTCAATGAGGCGATGGA
GTACTCGAAGAACCTGACATCACCGATTCGGAACCCGGACCGCGACACTG
CTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCATCTTCAAGAACAT
CGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTGTCGCCAACGGAAA
CACAAAGGACCACATGCGGCTTCACATCCAGAAATGCATTGAGACCTTTG
GCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCCATCTGGCGTATCG
CATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCCGCGTTGGTCCGGA
TACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACTGCAAAGATCATGA
ACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCGACACAACAAGCGC
AACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGCTTCGTTACTTGCG
GAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTGATGGAGAAGCTGG
GTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCATGTAAATTAGCTAT
TTGGCGCTTGTATTCTACATATTTTCTTTTCTTTGTATTTTCTCTGCCTA
AGCTCAATCTCAGCGTGTAACCTTATGTCTCGATCAAGGGTTCTTCCTGT
TTTATAGTCTGTATGACAAAGAACCCGTGGGTAATCTACTATCTGCGTGA
TCTGCTGTGAAAATGTCTCCTGTATATATTTTATAACCTTTCGTGC
back to top

Coding sequence (CDS) from alignment at KZ851967.1:12940..14185-

>M747DRAFT_300106-T1 ID=M747DRAFT_300106-T1|Name=M747DRAFT_300106-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1800bp|location=Sequence derived from alignment at KZ851967.1:12940..14185- (Aspergillus niger ATCC 13496)
GCCCTTCCTCCGTGCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCG
AAAACCTCCGTAAGAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCA
TGACCCTTTCCTTATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCT
CTCGCCAGAAAGCCCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCC
GTCCAAAGCGAACCTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGC
GACTTTGCAGGACACAGACCTCAATTACTTCGTCACACCGGATGGTCTCA
ATGAGGCGATGGAGTACTCGAAGAACCTGACATCACCGATTCGGAACCCG
GACCGCGACACTGCTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCA
TCTTCAAGAACATCGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTG
TCGCCAACGGAAACACAAAGGACCACATGCGGCTTCACATCCAGAAATGC
ATTGAGACCTTTGGCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCC
ATCTGGCGTATCGCATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCC
GCGTTGGTCCGGATACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACT
GCAAAGATCATGAACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCG
ACACAACAAGCGCAACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGC
TTCGTTACTTGCGGAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTG
ATGGAGAAGCTGGGTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCAT
GTAAATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAG
GCCCTTCCTCCGTGCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCG
AAAACCTCCGTAAGAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCA
TGACCCTTTCCTTATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCT
CTCGCCAGAAAGCCCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCC
GTCCAAAGCGAACCTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGC
GACTTTGCAGGACACAGACCTCAATTACTTCGTCACACCGGATGGTCTCA
ATGAGGCGATGGAGTACTCGAAGAACCTGACATCACCGATTCGGAACCCG
GACCGCGACACTGCTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCA
TCTTCAAGAACATCGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTG
TCGCCAACGGAAACACAAAGGACCACATGCGGCTTCACATCCAGAAATGC
ATTGAGACCTTTGGCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCC
ATCTGGCGTATCGCATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCC
GCGTTGGTCCGGATACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACT
GCAAAGATCATGAACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCG
ACACAACAAGCGCAACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGC
TTCGTTACTTGCGGAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTG
ATGGAGAAGCTGGGTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCAT
GTAAATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_300106M747DRAFT_300106Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300106-T1M747DRAFT_300106-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300106-T1.cdsM747DRAFT_300106-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300106-T1.utr3p1M747DRAFT_300106-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300106-T1.exon2M747DRAFT_300106-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_300106-T1.exon1M747DRAFT_300106-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300106-T1.utr5p1M747DRAFT_300106-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092643JW
DBxrefInterPro:IPR009068
DBxrefInterPro:IPR005290
DBxrefInterPro:IPR000589
DBxrefPFAM:PF00312
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851967.1supercontigKZ851967.1:12940..14185 -
Powered by Drupal