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M747DRAFT_300449-T1, M747DRAFT_300449-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_300449-T1
Unique NameM747DRAFT_300449-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:132818..133989+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_300449-T1 ID=M747DRAFT_300449-T1|Name=M747DRAFT_300449-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1172bp|location=Sequence derived from alignment at KZ851899.1:132818..133989+ (Aspergillus niger ATCC 13496)
ATGCCCGGAAAAGAGTTACCTGATCGCTGCATGAATTGTCATGAGGCTGA
ACCGGCCTTTCTATTGCGCGAGCGTCATGTCTGCCAGTACGTCTCGCCCC
AAAGTACACCTGTTGCCGCTACTAGTCCATACTGATCTCAGTTACCCCTC
CATCCAGAGAATGTTATATTCGATTCTTGAACTTCAAGCCATTCAGGCGC
ATGGAACGGTATCGTCTCCGGAGGAATATGCCACAGACCGGTCCCTGCAA
ATTGCTGCTCCCCCTTTCGTACGGCGTCTCCTCCACTGTGCTATTGCACA
TGCTGCACCGGCAGTTGGAGGCACTACGCTCAAAAAAACATGGTCCCGCG
GGCTTCGAAATCCTCGTCCTCGTCGTTGAGCCTTCGACAATCTCCCCCGT
TCCTCCGCACGAAGAAGGCTTTGCACTCGCGCAGCAGACCTTCCCGCTCT
GTTCCTTCACCCGGCTCCCCTTCCACAGTATCTTCGAGCTTGACCCGGAT
GTCCATCAAATCATGTCGCAGTATGCCGGGGAGCACTTCACAGATGACAC
TTCGCTGTCCGATGAGGAGCGTTTGAATCGCTTCCGCAGGTCGATTACAA
CAGCCACATCCAAGTCCGATGTCGACCAAATTTTGTTGAACAAACTTGTC
GTTGCTTTCGCAAAGAAAATGGAATGCCGCGGCATAGTATGGGGTGACTC
GGATAGCAAGCTCGCTGCAAAGACCCTCGCCAACGTCGCGAAAGGACGCG
GCTCTGCAGTGACGTGGCAGGTGTGCGATGGAATGTCGCCTTTTGGCCTA
GAATTCAACTTCCCGCTTCGGGACGTGTTCACGGCAGAGATACGCACCTA
TGCCACCCTCTTTCCCGAGCTGGCTGGCATCATCGTTCATGACGAGCCTC
CCTCAGAGAATACGCTTACCAAGAATCTGTCGATCGATGAGCTGATGATC
CGTTATGTCAGCACTCAGGGTGAGAAATACCCCGGCGTCATGTTGAACGT
AACTAGGACTGCCAGTAAGCTCCAGTCGTCTGGTACATCTATCGGCGGAC
TGCAGTGCAATTTCTGCGGGGCCTTCATGACTACAAATGAGAATATCACG
GGCGAACAAGGCAACGAACAGCTTCAATTCTGCTATGCCTGTGCTCGGTC
CCAACCCGAATTGAGCTGTTAA
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Coding sequence (CDS) from alignment at KZ851899.1:132818..133989+

>M747DRAFT_300449-T1 ID=M747DRAFT_300449-T1|Name=M747DRAFT_300449-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2124bp|location=Sequence derived from alignment at KZ851899.1:132818..133989+ (Aspergillus niger ATCC 13496)
ATGCCCGGAAAAGAGTTACCTGATCGCTGCATGAATTGTCATGAGGCTGA
ACCGGCCTTTCTATTGCGCGAGCGTCATGTCTGCCAGCGCATGGAACGGT
ATCGTCTCCGGAGGAATATGCCACAGACCGGTCCCTGCAAATTGCTGCTC
CCCCTTTCGTACGGCGTCTCCTCCACTGTGCTATTGCACATGCTGCACCG
GCAGTTGGAGGCACTACGCTCAAAAAAACATGGTCCCGCGGGCTTCGAAA
TCCTCGTCCTCGTCGTTGAGCCTTCGACAATCTCCCCCGTTCCTCCGCAC
GAAGAAGGCTTTGCACTCGCGCAGCAGACCTTCCCGCTCTGTTCCTTCAC
CCGGCTCCCCTTCCACAGTATCTTCGAGCTTGACCCGGATGTCCATCAAA
TCATGTCGCAGTATGCCGGGGAGCACTTCACAGATGACACTTCGCTGTCC
GATGAGGAGCGTTTGAATCGCTTCCGCAGGTCGATTACAACAGCCACATC
CAAGTCCGATGTCGACCAAATTTTGTTGAACAAACTTGTCGTTGCTTTCG
CAAAGAAAATGGAATGCCGCGGCATAGTATGGGGTGACTCGGATAGCAAG
CTCGCTGCAAAGACCCTCGCCAACGTCGCGAAAGGACGCGGCTCTGCAGT
GACGTGGCAGGTGTGCGATGGAATGTCGCCTTTTGGCCTAGAATTCAACT
TCCCGCTTCGGGACGTGTTCACGGCAGAGATACGCACCTATGCCACCCTC
TTTCCCGAGCTGGCTGGCATCATCGTTCATGACGAGCCTCCCTCAGAGAA
TACGCTTACCAAGAATCTGTCGATCGATGAGCTGATGATCCGTTATGTCA
GCACTCAGGGTGAGAAATACCCCGGCGTCATGTTGAACGTAACTAGGACT
GCCAGTAAGCTCCAGTCGTCTGGTACATCTATCGGCGGACTGCAGTGCAA
TTTCTGCGGGGCCTTCATGACTACAAATGAGAATATCACGGGCGAACAAG
GCAACGAACAGCTTCAATTCTGCTATGCCTGTGCTCGGTCCCAACCCGAA
TTGAGCTGTTAAATGCCCGGAAAAGAGTTACCTGATCGCTGCATGAATTG
TCATGAGGCTGAACCGGCCTTTCTATTGCGCGAGCGTCATGTCTGCCAGC
GCATGGAACGGTATCGTCTCCGGAGGAATATGCCACAGACCGGTCCCTGC
AAATTGCTGCTCCCCCTTTCGTACGGCGTCTCCTCCACTGTGCTATTGCA
CATGCTGCACCGGCAGTTGGAGGCACTACGCTCAAAAAAACATGGTCCCG
CGGGCTTCGAAATCCTCGTCCTCGTCGTTGAGCCTTCGACAATCTCCCCC
GTTCCTCCGCACGAAGAAGGCTTTGCACTCGCGCAGCAGACCTTCCCGCT
CTGTTCCTTCACCCGGCTCCCCTTCCACAGTATCTTCGAGCTTGACCCGG
ATGTCCATCAAATCATGTCGCAGTATGCCGGGGAGCACTTCACAGATGAC
ACTTCGCTGTCCGATGAGGAGCGTTTGAATCGCTTCCGCAGGTCGATTAC
AACAGCCACATCCAAGTCCGATGTCGACCAAATTTTGTTGAACAAACTTG
TCGTTGCTTTCGCAAAGAAAATGGAATGCCGCGGCATAGTATGGGGTGAC
TCGGATAGCAAGCTCGCTGCAAAGACCCTCGCCAACGTCGCGAAAGGACG
CGGCTCTGCAGTGACGTGGCAGGTGTGCGATGGAATGTCGCCTTTTGGCC
TAGAATTCAACTTCCCGCTTCGGGACGTGTTCACGGCAGAGATACGCACC
TATGCCACCCTCTTTCCCGAGCTGGCTGGCATCATCGTTCATGACGAGCC
TCCCTCAGAGAATACGCTTACCAAGAATCTGTCGATCGATGAGCTGATGA
TCCGTTATGTCAGCACTCAGGGTGAGAAATACCCCGGCGTCATGTTGAAC
GTAACTAGGACTGCCAGTAAGCTCCAGTCGTCTGGTACATCTATCGGCGG
ACTGCAGTGCAATTTCTGCGGGGCCTTCATGACTACAAATGAGAATATCA
CGGGCGAACAAGGCAACGAACAGCTTCAATTCTGCTATGCCTGTGCTCGG
TCCCAACCCGAATTGAGCTGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000049tRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
GO:0034227tRNA thio-modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NCS2M747DRAFT_300449Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300449-T1.exon1M747DRAFT_300449-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_300449-T1.exon2M747DRAFT_300449-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300449-T1.cdsM747DRAFT_300449-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300449-T1M747DRAFT_300449-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019407
DBxrefInterPro:IPR014729
Productcytoplasmic tRNA 2-thiolation protein 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:132818..133989 +
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