You are here

Home

M747DRAFT_303606-T1, M747DRAFT_303606-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_303606-T1
Unique NameM747DRAFT_303606-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:462191..463441+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_303606-T1 ID=M747DRAFT_303606-T1|Name=M747DRAFT_303606-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1251bp|location=Sequence derived from alignment at KZ851907.1:462191..463441+ (Aspergillus niger ATCC 13496)
ATGGCGCCCGCAAGCACTTCTCACCGACAGACGCATAATCTGCTCTTGAT
TTCAAAGCTTCTTAGCCTGAGAGATACCGCATCACCGCTTACCTTGGTCT
TGGACTCACTAGAGCAGCCCGCGACCCCATTGACCAAAGAATACATTCGG
CGTGCAAAGGTAGGCATGCTGTTTGCTCTGAGAATTGGAGGGCTGTTCGC
ACAGTTGAAAGTCGGCTACGAGGCAGTTGAACAATGGCCCTCGTGCCATT
AAGTGCCTGTTCCGTCATTGCTTGCCGACGTGGCTAACTGTCGTCGCAAC
AGCTTTCCAGGACCCATGTAACCCTCCTTGCCTTTGAAACATTGAAACCC
CCGGAGGGCGTCGATGCATTCATTCCCGCTCGCCGGAAGAGTCCTTTAGA
GATCCTGAAAGCAGTTGGCGCTGCTTACCAAAATGTCTCATCGAATAGCC
CTACCCGAAGTATGCCTATCCCAAGCTTCTTCCGCCGAGCTTCATCCGTG
AATTGGCTAATGTATCCAAGGGAGACTCATCCTCATTGACGCCATCAACC
CGCTTCTACACTCGAAAAAGAATGATCCTCAGTTCCATGTATCACAATTT
CTAAGCTCCTTCCTGATTCCACCGAATCCCACAGCTCCGAAGGTGGAGGT
GTCGCTCGTGGTAAACTTTCATCAGGATGTTCCCAGCCCACCTGCTCTCT
CGCCCTACGCACCCTCGCCCCTCTCAATGCTGACATACCTCGCTACTACA
ATCATCACCCTCCATTCATTCTCGCATATTCTCGCGCAGAAAGCGGCACG
CGATCGGAGTTTGGCCGCGCCTGTCTTTGGTCTTGAAGAAGAGCAGGATG
GTGTGCTCCTTGGCCGACTGGACAGACCGAGTGGTCAAGACTCATCAGAG
GGGATTGTACTCGAGCTGGAGCACCGCAGAAAGAGTGGTCGCGGCGTCTT
GGAATGGTACTTCCTTCCTCCTGCGTCTCGTTACCCTCCCCAATACGTGA
AGGAGATTGTGACGTTGCTGGACGACCATCCCTTGTACCGCCCGCCGCAG
GAGCCGGACGCTGGTGCAGGCGAAGAAGAGCCCGAATCAACATTCGAATT
GCGCCTTACGGAAAGACAGAGACGAGAGCGAGAGGGTGTGGTGCTGCCGT
ACTTCGATGCCCAGCAGGGCGACGGTCCTGGTGAAGGAGGACGCATCTTA
TACGACATGGGAGAAGAGGACGATTTTGACGAAGAGGAAGATGAAATCTA
G
back to top

Coding sequence (CDS) from alignment at KZ851907.1:462191..463441+

>M747DRAFT_303606-T1 ID=M747DRAFT_303606-T1|Name=M747DRAFT_303606-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3141bp|location=Sequence derived from alignment at KZ851907.1:462191..463441+ (Aspergillus niger ATCC 13496)
ATGGCGCCCGCAAGCACTTCTCACCGACAGACGCATAATCTGCTCTTGAT
TTCAAAGCTTCTTAGCCTGAGAGATACCGCATCACCGCTTACCTTGGTCT
TGGACTCACTAGAGCAGCCCGCGACCCCATTGACCAAAGAATACATTCGG
CGTGCAAAGCTTTCCAGGACCCATGTAACCCTCCTTGCCTTTGAAACATT
GAAACCCCCGGAGGGCGTCGATGCATTCATTCCCGCTCGCCGGAAGAGTC
CTTTAGAGATCCTGAAAGCAGTTGGCGCTGCTTACCAAAATGTCTCATCG
AATAGCCCTACCCGAAGGAGACTCATCCTCATTGACGCCATCAACCCGCT
TCTACACTCGAAAAAGAATGATCCTCAGTTCCATGTATCACAATTTCTAA
GCTCCTTCCTGATTCCACCGAATCCCACAGCTCCGAAGGTGGAGGTGTCG
CTCGTGGTAAACTTTCATCAGGATGTTCCCAGCCCACCTGCTCTCTCGCC
CTACGCACCCTCGCCCCTCTCAATGCTGACATACCTCGCTACTACAATCA
TCACCCTCCATTCATTCTCGCATATTCTCGCGCAGAAAGCGGCACGCGAT
CGGAGTTTGGCCGCGCCTGTCTTTGGTCTTGAAGAAGAGCAGGATGGTGT
GCTCCTTGGCCGACTGGACAGACCGAGTGGTCAAGACTCATCAGAGGGGA
TTGTACTCGAGCTGGAGCACCGCAGAAAGAGTGGTCGCGGCGTCTTGGAA
TGGTACTTCCTTCCTCCTGCGTCTCGTTACCCTCCCCAATACGTGAAGGA
GATTGTGACGTTGCTGGACGACCATCCCTTGTACCGCCCGCCGCAGGAGC
CGGACGCTGGTGCAGGCGAAGAAGAGCCCGAATCAACATTCGAATTGCGC
CTTACGGAAAGACAGAGACGAGAGCGAGAGGGTGTGGTGCTGCCGTACTT
CGATGCCCAGCAGGGCGACGGTCCTGGTGAAGGAGGACGCATCTTATACG
ACATGGGAGAAGAGGACGATTTTGACGAAGAGGAAGATGAAATCTAGATG
GCGCCCGCAAGCACTTCTCACCGACAGACGCATAATCTGCTCTTGATTTC
AAAGCTTCTTAGCCTGAGAGATACCGCATCACCGCTTACCTTGGTCTTGG
ACTCACTAGAGCAGCCCGCGACCCCATTGACCAAAGAATACATTCGGCGT
GCAAAGCTTTCCAGGACCCATGTAACCCTCCTTGCCTTTGAAACATTGAA
ACCCCCGGAGGGCGTCGATGCATTCATTCCCGCTCGCCGGAAGAGTCCTT
TAGAGATCCTGAAAGCAGTTGGCGCTGCTTACCAAAATGTCTCATCGAAT
AGCCCTACCCGAAGGAGACTCATCCTCATTGACGCCATCAACCCGCTTCT
ACACTCGAAAAAGAATGATCCTCAGTTCCATGTATCACAATTTCTAAGCT
CCTTCCTGATTCCACCGAATCCCACAGCTCCGAAGGTGGAGGTGTCGCTC
GTGGTAAACTTTCATCAGGATGTTCCCAGCCCACCTGCTCTCTCGCCCTA
CGCACCCTCGCCCCTCTCAATGCTGACATACCTCGCTACTACAATCATCA
CCCTCCATTCATTCTCGCATATTCTCGCGCAGAAAGCGGCACGCGATCGG
AGTTTGGCCGCGCCTGTCTTTGGTCTTGAAGAAGAGCAGGATGGTGTGCT
CCTTGGCCGACTGGACAGACCGAGTGGTCAAGACTCATCAGAGGGGATTG
TACTCGAGCTGGAGCACCGCAGAAAGAGTGGTCGCGGCGTCTTGGAATGG
TACTTCCTTCCTCCTGCGTCTCGTTACCCTCCCCAATACGTGAAGGAGAT
TGTGACGTTGCTGGACGACCATCCCTTGTACCGCCCGCCGCAGGAGCCGG
ACGCTGGTGCAGGCGAAGAAGAGCCCGAATCAACATTCGAATTGCGCCTT
ACGGAAAGACAGAGACGAGAGCGAGAGGGTGTGGTGCTGCCGTACTTCGA
TGCCCAGCAGGGCGACGGTCCTGGTGAAGGAGGACGCATCTTATACGACA
TGGGAGAAGAGGACGATTTTGACGAAGAGGAAGATGAAATCTAGATGGCG
CCCGCAAGCACTTCTCACCGACAGACGCATAATCTGCTCTTGATTTCAAA
GCTTCTTAGCCTGAGAGATACCGCATCACCGCTTACCTTGGTCTTGGACT
CACTAGAGCAGCCCGCGACCCCATTGACCAAAGAATACATTCGGCGTGCA
AAGCTTTCCAGGACCCATGTAACCCTCCTTGCCTTTGAAACATTGAAACC
CCCGGAGGGCGTCGATGCATTCATTCCCGCTCGCCGGAAGAGTCCTTTAG
AGATCCTGAAAGCAGTTGGCGCTGCTTACCAAAATGTCTCATCGAATAGC
CCTACCCGAAGGAGACTCATCCTCATTGACGCCATCAACCCGCTTCTACA
CTCGAAAAAGAATGATCCTCAGTTCCATGTATCACAATTTCTAAGCTCCT
TCCTGATTCCACCGAATCCCACAGCTCCGAAGGTGGAGGTGTCGCTCGTG
GTAAACTTTCATCAGGATGTTCCCAGCCCACCTGCTCTCTCGCCCTACGC
ACCCTCGCCCCTCTCAATGCTGACATACCTCGCTACTACAATCATCACCC
TCCATTCATTCTCGCATATTCTCGCGCAGAAAGCGGCACGCGATCGGAGT
TTGGCCGCGCCTGTCTTTGGTCTTGAAGAAGAGCAGGATGGTGTGCTCCT
TGGCCGACTGGACAGACCGAGTGGTCAAGACTCATCAGAGGGGATTGTAC
TCGAGCTGGAGCACCGCAGAAAGAGTGGTCGCGGCGTCTTGGAATGGTAC
TTCCTTCCTCCTGCGTCTCGTTACCCTCCCCAATACGTGAAGGAGATTGT
GACGTTGCTGGACGACCATCCCTTGTACCGCCCGCCGCAGGAGCCGGACG
CTGGTGCAGGCGAAGAAGAGCCCGAATCAACATTCGAATTGCGCCTTACG
GAAAGACAGAGACGAGAGCGAGAGGGTGTGGTGCTGCCGTACTTCGATGC
CCAGCAGGGCGACGGTCCTGGTGAAGGAGGACGCATCTTATACGACATGG
GAGAAGAGGACGATTTTGACGAAGAGGAAGATGAAATCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033588Elongator holoenzyme complex
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_303606M747DRAFT_303606Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_303606-T1.exon1M747DRAFT_303606-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_303606-T1.exon2M747DRAFT_303606-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_303606-T1.exon3M747DRAFT_303606-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_303606-T1.cdsM747DRAFT_303606-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_303606-T1M747DRAFT_303606-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019519
DBxrefPFAM:PF10483
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:462191..463441 +
Powered by Drupal