You are here

Home

M747DRAFT_303734-T1, M747DRAFT_303734-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_303734-T1
Unique NameM747DRAFT_303734-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:854229..855238+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_303734-T1 ID=M747DRAFT_303734-T1|Name=M747DRAFT_303734-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1010bp|location=Sequence derived from alignment at KZ851907.1:854229..855238+ (Aspergillus niger ATCC 13496)
ATGACAGGTGCAACATGCATTGAACTTACCAGTGACTCACCACAGGCTGA
GGTCAGGTTAAATGATGAGGATATAGAACAGTTGCTTTGTGAGGCTGAGG
ATCGATTGAGACCCAGTGATGTTGGGGCCAACTCTTCTAATGCCAATAGC
TTCACCAATGTGGGTTTGGAGGCAACCTCAGTTCAGTACGTGTACCTGTC
AAACTTCTTTGCCCATCAAAAGCTAATGTGTTATTAGTATCCCTAAGTTG
GCGTCAGGGGACTCCCTAAGACCATATGTCCGTCAACAACATGATGTTGC
AGTGGTGGAAGATGCCATCAAAGTAATAGATAGCTCTAGCATGAGACCGT
CACTCGAGATGCGACCGACTGGATACAAACACTCAAAGCCAAGTTCCAAG
GTAAGACGCCTTACTTTCCTTTGAACACCCACTGTGTCGTTTTGTCACAG
ATGCTATGAGGAAAATTAATCCCATCGCGTGAGCGCTTGATGCAGCTAAA
CATCCCGTACTGGGATGCGCTGTGCCTATGAGAGTACACATTTTTGTTTC
ATAGTTACTCTGAGCATCTTCCCTATCATTACTATTCTGATATTGCCTAT
ACTGGGGGAATATAGCTAACATGTCTACTATTAAGGATAAACCCACAGCT
GGCAGCGCATGGTTCGACCTTCCAAAGACGGAGTTGACAACAGAACTCAA
GAGGGATCTGCAGTTGCTTCGAATGCGCTCAGTATTAGACCCAAAGAGAC
ATTACAAGAAGGAGGGCGGCAAAGCACGTCCTCCTCAGTATTCTCAAGTG
GGAACCATTATCGAAGGTCCGACTGAGTATTTCAGTAGCCGCATCGCGAA
AAGGGATCGAAAGAGGACTTTCGTCGAGGAAGCACTGGCATCGGAGAGAG
AAAACAAGCGATTTGAGGCTAAGTACAAGGATATACAATCTCGTAAGCAG
AGCGGCAAACGGTCCTACTACAAGAACTTGCGAGCGAAAAGAAACACGAA
GAGCAAGTGA
back to top

Coding sequence (CDS) from alignment at KZ851907.1:854229..855238+

>M747DRAFT_303734-T1 ID=M747DRAFT_303734-T1|Name=M747DRAFT_303734-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2169bp|location=Sequence derived from alignment at KZ851907.1:854229..855238+ (Aspergillus niger ATCC 13496)
ATGACAGGTGCAACATGCATTGAACTTACCAGTGACTCACCACAGGCTGA
GGTCAGGTTAAATGATGAGGATATAGAACAGTTGCTTTGTGAGGCTGAGG
ATCGATTGAGACCCAGTGATGTTGGGGCCAACTCTTCTAATGCCAATAGC
TTCACCAATGTGGGTTTGGAGGCAACCTCAGTTCATATCCCTAAGTTGGC
GTCAGGGGACTCCCTAAGACCATATGTCCGTCAACAACATGATGTTGCAG
TGGTGGAAGATGCCATCAAAGTAATAGATAGCTCTAGCATGAGACCGTCA
CTCGAGATGCGACCGACTGGATACAAACACTCAAAGCCAAGTTCCAAGGA
TAAACCCACAGCTGGCAGCGCATGGTTCGACCTTCCAAAGACGGAGTTGA
CAACAGAACTCAAGAGGGATCTGCAGTTGCTTCGAATGCGCTCAGTATTA
GACCCAAAGAGACATTACAAGAAGGAGGGCGGCAAAGCACGTCCTCCTCA
GTATTCTCAAGTGGGAACCATTATCGAAGGTCCGACTGAGTATTTCAGTA
GCCGCATCGCGAAAAGGGATCGAAAGAGGACTTTCGTCGAGGAAGCACTG
GCATCGGAGAGAGAAAACAAGCGATTTGAGGCTAAGTACAAGGATATACA
ATCTCGTAAGCAGAGCGGCAAACGGTCCTACTACAAGAACTTGCGAGCGA
AAAGAAACACGAAGAGCAAGTGAATGACAGGTGCAACATGCATTGAACTT
ACCAGTGACTCACCACAGGCTGAGGTCAGGTTAAATGATGAGGATATAGA
ACAGTTGCTTTGTGAGGCTGAGGATCGATTGAGACCCAGTGATGTTGGGG
CCAACTCTTCTAATGCCAATAGCTTCACCAATGTGGGTTTGGAGGCAACC
TCAGTTCATATCCCTAAGTTGGCGTCAGGGGACTCCCTAAGACCATATGT
CCGTCAACAACATGATGTTGCAGTGGTGGAAGATGCCATCAAAGTAATAG
ATAGCTCTAGCATGAGACCGTCACTCGAGATGCGACCGACTGGATACAAA
CACTCAAAGCCAAGTTCCAAGGATAAACCCACAGCTGGCAGCGCATGGTT
CGACCTTCCAAAGACGGAGTTGACAACAGAACTCAAGAGGGATCTGCAGT
TGCTTCGAATGCGCTCAGTATTAGACCCAAAGAGACATTACAAGAAGGAG
GGCGGCAAAGCACGTCCTCCTCAGTATTCTCAAGTGGGAACCATTATCGA
AGGTCCGACTGAGTATTTCAGTAGCCGCATCGCGAAAAGGGATCGAAAGA
GGACTTTCGTCGAGGAAGCACTGGCATCGGAGAGAGAAAACAAGCGATTT
GAGGCTAAGTACAAGGATATACAATCTCGTAAGCAGAGCGGCAAACGGTC
CTACTACAAGAACTTGCGAGCGAAAAGAAACACGAAGAGCAAGTGAATGA
CAGGTGCAACATGCATTGAACTTACCAGTGACTCACCACAGGCTGAGGTC
AGGTTAAATGATGAGGATATAGAACAGTTGCTTTGTGAGGCTGAGGATCG
ATTGAGACCCAGTGATGTTGGGGCCAACTCTTCTAATGCCAATAGCTTCA
CCAATGTGGGTTTGGAGGCAACCTCAGTTCATATCCCTAAGTTGGCGTCA
GGGGACTCCCTAAGACCATATGTCCGTCAACAACATGATGTTGCAGTGGT
GGAAGATGCCATCAAAGTAATAGATAGCTCTAGCATGAGACCGTCACTCG
AGATGCGACCGACTGGATACAAACACTCAAAGCCAAGTTCCAAGGATAAA
CCCACAGCTGGCAGCGCATGGTTCGACCTTCCAAAGACGGAGTTGACAAC
AGAACTCAAGAGGGATCTGCAGTTGCTTCGAATGCGCTCAGTATTAGACC
CAAAGAGACATTACAAGAAGGAGGGCGGCAAAGCACGTCCTCCTCAGTAT
TCTCAAGTGGGAACCATTATCGAAGGTCCGACTGAGTATTTCAGTAGCCG
CATCGCGAAAAGGGATCGAAAGAGGACTTTCGTCGAGGAAGCACTGGCAT
CGGAGAGAGAAAACAAGCGATTTGAGGCTAAGTACAAGGATATACAATCT
CGTAAGCAGAGCGGCAAACGGTCCTACTACAAGAACTTGCGAGCGAAAAG
AAACACGAAGAGCAAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_303734M747DRAFT_303734Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_303734-T1.exon1M747DRAFT_303734-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_303734-T1.exon2M747DRAFT_303734-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_303734-T1.exon3M747DRAFT_303734-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_303734-T1.cdsM747DRAFT_303734-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_303734-T1M747DRAFT_303734-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092643NE
DBxrefInterPro:IPR014810
DBxrefPFAM:PF08698
Productnucleolus protein required for cell viability
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:854229..855238 +
Powered by Drupal