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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851914.1:213712..215255+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_305392-T1 ID=M747DRAFT_305392-T1|Name=M747DRAFT_305392-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1544bp|location=Sequence derived from alignment at KZ851914.1:213712..215255+ (Aspergillus niger ATCC 13496)
ATGAAGCTCACGTTTAAGGTACGCGTGATTCCTACCCCACCCCCTCTACT
TATCCTCGAGTCTGACATGTTCGTTCTCTCCCTCTAGGACCTGAAACAAC
AAAAGTTTGTAATCGATGCAGAGCCCTCAGAGACGGTAGGCGGTTCCTTT
CTCTCAGCGTCGTGACTTTGCCGGCGTCAGTGCGGGGCTAAATGAATTAT
CCGACAGGTCGGGCAAGTGAAGGAAAAGATCTCCAAGGAGAAGGGATGGG
AGGTTCCTCAGCTTAAGCTCATCTACTCTGGTAAGTAAAGCAACTTTGGC
GTCCTACACTTGCTGCTCTATTTCCGATAGCCTTCTGCCACTCTGTTTGG
CCGGTATTTCAGCGCTGACCGTTCTTCCCCCCCAACAGGAAAGATCCTTC
AGGATGACAAGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTCATA
GTGTGCATGGTCTCTAAGGTACGTACACCCTAGGCCAAGGATATATTTCG
TATGAATGAAGGACTAAATTCTCGTGGTGTAGCCCAAGGCTACTTCCTCC
GGCACCTCGTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCTAC
CCCTGCTGCGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACCGG
CTGTTCCTTCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCACAG
GGCTCCGCATTCAATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGCGA
GGCTGTCGTGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGTAA
ACCGTGCAATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCATCGAATAC
CTTTTGAATGTGAGTTCATGGCGCTGGTAGCCGGCTATTGGGTTGCCCGA
TCTTGCGCTGACTTTAAGCAGGGTATTCCGGAAAACATCCAACAGGAACA
GCAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAA
GCGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTCGAAGCTGCT
GCTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGG
TGGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACCCCCACTTCC
AGCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTCGAACCCATC
CTCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCA
AAATGAGGAACAGTTCCTGCAGCTCCTGAGTGAGGAGCCTGATGATGATG
AGGCGCTCCCCCATGGTACGACTCAAATTCATGTTACGGAAGAAGAGAGA
GATGCCATTGAACGTGTGCGTATAATATACTCTGGTAATTCCTTGTGGAA
ATGTAGCTGACATGTTTCTGCTAGCTCTGCCGGCTTGGATTCTCTCGGGA
CTCGGTCATTCAAGCTTATTTCGCTTGCGATAAGAATGAAGAGCTCGCAG
CTAACTATCTGTTTGAGAACCCCGACGATCCCGAAGATATGTGA back to topCoding sequence (CDS) from alignment at KZ851914.1:213712..215255+ >M747DRAFT_305392-T1 ID=M747DRAFT_305392-T1|Name=M747DRAFT_305392-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=7770bp|location=Sequence derived from alignment at KZ851914.1:213712..215255+ (Aspergillus niger ATCC 13496)
ATGAAGCTCACGTTTAAGGACCTGAAACAACAAAAGTTTGTAATCGATGC
AGAGCCCTCAGAGACGGTCGGGCAAGTGAAGGAAAAGATCTCCAAGGAGA
AGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGGAAAGATCCTT
CAGGATGACAAGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTCAT
AGTGTGCATGGTCTCTAAGCCCAAGGCTACTTCCTCCGGCACCTCGTCAC
AAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCTACCCCTGCTGCGCCT
CCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCTTCGAC
TCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGCATTCA
ATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCGTGGCT
CAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCAATGAG
GGCTGCTTTCTTTAACCCCGATCGTGCCATCGAATACCTTTTGAATGGTA
TTCCGGAAAACATCCAACAGGAACAGCAGCAGCAAGCCGCCGCCGCTAGC
GCACCCCAGTCTGCTGCTCCCGAAAGCGCCCCGTCCGCTGGTGACGACGA
ACCGGTCAACCTGTTCGAAGCTGCTGCTCAGGCTGGTGGCCAGGAGGGAG
GAGGCCGAGGAGCTCGTGCTGCCGGTGGTGCTGAACTCCCGAGCCTCGAA
TTTCTGCGGAATAACCCCCACTTCCAGCAGCTTCGTCAGTTGGTCCAACA
ACAACCACAAATGCTCGAACCCATCCTCCAACAAGTCGCCGCTGGAAACC
CCCAAATTGCGCAGCTCATTGGCCAAAATGAGGAACAGTTCCTGCAGCTC
CTGAGTGAGGAGCCTGATGATGATGAGGCGCTCCCCCATGGTACGACTCA
AATTCATGTTACGGAAGAAGAGAGAGATGCCATTGAACGTCTCTGCCGGC
TTGGATTCTCTCGGGACTCGGTCATTCAAGCTTATTTCGCTTGCGATAAG
AATGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCGACGATCCCGA
AGATATGTGAATGAAGCTCACGTTTAAGGACCTGAAACAACAAAAGTTTG
TAATCGATGCAGAGCCCTCAGAGACGGTCGGGCAAGTGAAGGAAAAGATC
TCCAAGGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGG
AAAGATCCTTCAGGATGACAAGACGATCGAGTCATACAACATCGAGGAGA
AGGGGTTCATAGTGTGCATGGTCTCTAAGCCCAAGGCTACTTCCTCCGGC
ACCTCGTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCTACCCC
TGCTGCGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTG
TTCCTTCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGC
TCCGCATTCAATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGC
TGTCGTGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACC
GTGCAATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCATCGAATACCTT
TTGAATGGTATTCCGGAAAACATCCAACAGGAACAGCAGCAGCAAGCCGC
CGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAAGCGCCCCGTCCGCTG
GTGACGACGAACCGGTCAACCTGTTCGAAGCTGCTGCTCAGGCTGGTGGC
CAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGGTGGTGCTGAACTCCC
GAGCCTCGAATTTCTGCGGAATAACCCCCACTTCCAGCAGCTTCGTCAGT
TGGTCCAACAACAACCACAAATGCTCGAACCCATCCTCCAACAAGTCGCC
GCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCAAAATGAGGAACAGTT
CCTGCAGCTCCTGAGTGAGGAGCCTGATGATGATGAGGCGCTCCCCCATG
GTACGACTCAAATTCATGTTACGGAAGAAGAGAGAGATGCCATTGAACGT
CTCTGCCGGCTTGGATTCTCTCGGGACTCGGTCATTCAAGCTTATTTCGC
TTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCG
ACGATCCCGAAGATATGTGAATGAAGCTCACGTTTAAGGACCTGAAACAA
CAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGACGGTCGGGCAAGTGAA
GGAAAAGATCTCCAAGGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCA
TCTACTCTGGAAAGATCCTTCAGGATGACAAGACGATCGAGTCATACAAC
ATCGAGGAGAAGGGGTTCATAGTGTGCATGGTCTCTAAGCCCAAGGCTAC
TTCCTCCGGCACCTCGTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCA
CCTCTACCCCTGCTGCGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACT
ACACCGGCTGTTCCTTCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCA
GGCACAGGGCTCCGCATTCAATGACCCCTCCGCATTGCTGAGTGGCACTC
AGAGCGAGGCTGTCGTGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGT
GATGTAAACCGTGCAATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCAT
CGAATACCTTTTGAATGGTATTCCGGAAAACATCCAACAGGAACAGCAGC
AGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAAGCGCC
CCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTCGAAGCTGCTGCTCA
GGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGGTGGTG
CTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACCCCCACTTCCAGCAG
CTTCGTCAGTTGGTCCAACAACAACCACAAATGCTCGAACCCATCCTCCA
ACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCAAAATG
AGGAACAGTTCCTGCAGCTCCTGAGTGAGGAGCCTGATGATGATGAGGCG
CTCCCCCATGGTACGACTCAAATTCATGTTACGGAAGAAGAGAGAGATGC
CATTGAACGTCTCTGCCGGCTTGGATTCTCTCGGGACTCGGTCATTCAAG
CTTATTTCGCTTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTT
GAGAACCCCGACGATCCCGAAGATATGTGAATGAAGCTCACGTTTAAGGA
CCTGAAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGACGGTCG
GGCAAGTGAAGGAAAAGATCTCCAAGGAGAAGGGATGGGAGGTTCCTCAG
CTTAAGCTCATCTACTCTGGAAAGATCCTTCAGGATGACAAGACGATCGA
GTCATACAACATCGAGGAGAAGGGGTTCATAGTGTGCATGGTCTCTAAGC
CCAAGGCTACTTCCTCCGGCACCTCGTCACAAGCGCCCTCCACCCCATCC
AGAGCCGTCACCTCTACCCCTGCTGCGCCTCCCGCCCCAGCCCCTTCTGC
GGCTTCCACTACACCGGCTGTTCCTTCGACTCCCTCCCCGGCCGCCGCGG
GGACCTCCCAGGCACAGGGCTCCGCATTCAATGACCCCTCCGCATTGCTG
AGTGGCACTCAGAGCGAGGCTGTCGTGGCTCAGATGGAGGCAATGGGTTT
CGCCCGGAGTGATGTAAACCGTGCAATGAGGGCTGCTTTCTTTAACCCCG
ATCGTGCCATCGAATACCTTTTGAATGGTATTCCGGAAAACATCCAACAG
GAACAGCAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTGCTCC
CGAAAGCGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTCGAAG
CTGCTGCTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCGTGCT
GCCGGTGGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACCCCCA
CTTCCAGCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTCGAAC
CCATCCTCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCTCATT
GGCCAAAATGAGGAACAGTTCCTGCAGCTCCTGAGTGAGGAGCCTGATGA
TGATGAGGCGCTCCCCCATGGTACGACTCAAATTCATGTTACGGAAGAAG
AGAGAGATGCCATTGAACGTCTCTGCCGGCTTGGATTCTCTCGGGACTCG
GTCATTCAAGCTTATTTCGCTTGCGATAAGAATGAAGAGCTCGCAGCTAA
CTATCTGTTTGAGAACCCCGACGATCCCGAAGATATGTGAATGAAGCTCA
CGTTTAAGGACCTGAAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCA
GAGACGGTCGGGCAAGTGAAGGAAAAGATCTCCAAGGAGAAGGGATGGGA
GGTTCCTCAGCTTAAGCTCATCTACTCTGGAAAGATCCTTCAGGATGACA
AGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTCATAGTGTGCATG
GTCTCTAAGCCCAAGGCTACTTCCTCCGGCACCTCGTCACAAGCGCCCTC
CACCCCATCCAGAGCCGTCACCTCTACCCCTGCTGCGCCTCCCGCCCCAG
CCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCTTCGACTCCCTCCCCG
GCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGCATTCAATGACCCCTC
CGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCGTGGCTCAGATGGAGG
CAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCAATGAGGGCTGCTTTC
TTTAACCCCGATCGTGCCATCGAATACCTTTTGAATGGTATTCCGGAAAA
CATCCAACAGGAACAGCAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGT
CTGCTGCTCCCGAAAGCGCCCCGTCCGCTGGTGACGACGAACCGGTCAAC
CTGTTCGAAGCTGCTGCTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGG
AGCTCGTGCTGCCGGTGGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGA
ATAACCCCCACTTCCAGCAGCTTCGTCAGTTGGTCCAACAACAACCACAA
ATGCTCGAACCCATCCTCCAACAAGTCGCCGCTGGAAACCCCCAAATTGC
GCAGCTCATTGGCCAAAATGAGGAACAGTTCCTGCAGCTCCTGAGTGAGG
AGCCTGATGATGATGAGGCGCTCCCCCATGGTACGACTCAAATTCATGTT
ACGGAAGAAGAGAGAGATGCCATTGAACGTCTCTGCCGGCTTGGATTCTC
TCGGGACTCGGTCATTCAAGCTTATTTCGCTTGCGATAAGAATGAAGAGC
TCGCAGCTAACTATCTGTTTGAGAACCCCGACGATCCCGAAGATATGTGA
ATGAAGCTCACGTTTAAGGACCTGAAACAACAAAAGTTTGTAATCGATGC
AGAGCCCTCAGAGACGGTCGGGCAAGTGAAGGAAAAGATCTCCAAGGAGA
AGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGGAAAGATCCTT
CAGGATGACAAGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTCAT
AGTGTGCATGGTCTCTAAGCCCAAGGCTACTTCCTCCGGCACCTCGTCAC
AAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCTACCCCTGCTGCGCCT
CCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCTTCGAC
TCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGCATTCA
ATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCGTGGCT
CAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCAATGAG
GGCTGCTTTCTTTAACCCCGATCGTGCCATCGAATACCTTTTGAATGGTA
TTCCGGAAAACATCCAACAGGAACAGCAGCAGCAAGCCGCCGCCGCTAGC
GCACCCCAGTCTGCTGCTCCCGAAAGCGCCCCGTCCGCTGGTGACGACGA
ACCGGTCAACCTGTTCGAAGCTGCTGCTCAGGCTGGTGGCCAGGAGGGAG
GAGGCCGAGGAGCTCGTGCTGCCGGTGGTGCTGAACTCCCGAGCCTCGAA
TTTCTGCGGAATAACCCCCACTTCCAGCAGCTTCGTCAGTTGGTCCAACA
ACAACCACAAATGCTCGAACCCATCCTCCAACAAGTCGCCGCTGGAAACC
CCCAAATTGCGCAGCTCATTGGCCAAAATGAGGAACAGTTCCTGCAGCTC
CTGAGTGAGGAGCCTGATGATGATGAGGCGCTCCCCCATGGTACGACTCA
AATTCATGTTACGGAAGAAGAGAGAGATGCCATTGAACGTCTCTGCCGGC
TTGGATTCTCTCGGGACTCGGTCATTCAAGCTTATTTCGCTTGCGATAAG
AATGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCGACGATCCCGA
AGATATGTGAATGAAGCTCACGTTTAAGGACCTGAAACAACAAAAGTTTG
TAATCGATGCAGAGCCCTCAGAGACGGTCGGGCAAGTGAAGGAAAAGATC
TCCAAGGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGG
AAAGATCCTTCAGGATGACAAGACGATCGAGTCATACAACATCGAGGAGA
AGGGGTTCATAGTGTGCATGGTCTCTAAGCCCAAGGCTACTTCCTCCGGC
ACCTCGTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCTACCCC
TGCTGCGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTG
TTCCTTCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGC
TCCGCATTCAATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGC
TGTCGTGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACC
GTGCAATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCATCGAATACCTT
TTGAATGGTATTCCGGAAAACATCCAACAGGAACAGCAGCAGCAAGCCGC
CGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAAGCGCCCCGTCCGCTG
GTGACGACGAACCGGTCAACCTGTTCGAAGCTGCTGCTCAGGCTGGTGGC
CAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGGTGGTGCTGAACTCCC
GAGCCTCGAATTTCTGCGGAATAACCCCCACTTCCAGCAGCTTCGTCAGT
TGGTCCAACAACAACCACAAATGCTCGAACCCATCCTCCAACAAGTCGCC
GCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCAAAATGAGGAACAGTT
CCTGCAGCTCCTGAGTGAGGAGCCTGATGATGATGAGGCGCTCCCCCATG
GTACGACTCAAATTCATGTTACGGAAGAAGAGAGAGATGCCATTGAACGT
CTCTGCCGGCTTGGATTCTCTCGGGACTCGGTCATTCAAGCTTATTTCGC
TTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCG
ACGATCCCGAAGATATGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0003684 | damaged DNA binding |
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process |
| GO:0006289 | nucleotide-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264CST |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR009060 |
| DBxref | InterPro:IPR036353 |
| DBxref | InterPro:IPR015360 |
| DBxref | InterPro:IPR000626 |
| DBxref | InterPro:IPR006636 |
| DBxref | InterPro:IPR015940 |
| DBxref | InterPro:IPR004806 |
| DBxref | PFAM:PF09280 |
| DBxref | PFAM:PF00240 |
| DBxref | PFAM:PF00627 |
| DBxref | PFAM:PF11976 |
| Product | UV excision repair protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| KZ851914.1 | supercontig | KZ851914.1:213712..215255 + |
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