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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851949.1:177947..179230- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_310074-T1 ID=M747DRAFT_310074-T1|Name=M747DRAFT_310074-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1284bp|location=Sequence derived from alignment at KZ851949.1:177947..179230- (Aspergillus niger ATCC 13496)
ATGACGCTATATCGCAATCTTCTGCTTTTGGCCAGCCTTGGACTGAGCTA
TGCTGCTCCCTCTAAGGTCCAACGTGCCCCTGATTCGTCCCTCCATGCTC
GTGCCGTCTGTACCCCAACCGCAGGAGGCGATTCTTCCACCGACGATGTG
CCCGCCATCACCGAGGCTCTCAGCTCGTGCGGGAACGGGGGCACCATTGT
ATTCCCGGAGGGCAGCACCTACTACCTCAACAGTGTGCTTGACTTGGGCA
ACTGCAGTAATTGCGACATCCAGGTGGAAGGTCTTTTGAAGTTCGCCAGC
GACACCGATTACTGGAGCGGTCGCACCGCCATGATCAGTGTATCCGATGT
GGATGGCCTGAAGCTGCGCTCATTGACTGGGTCGGGTGTCATCGATGGCA
ATGGCCAGGATGCGTACGTGATCACCATTCTCGGAAGCAAGCCTCCCAGT
CCATTTAGCTGACCGATGCAATTTAGGTGGGATCTCTTTGCGAGTGACAG
CAGTTACTCACGCCCAACGCTCCTGTACATCACTGGCGGCAGCAACCTCG
AAATCTCCGGGCTGCGTCAGAAGAACCCACCCAACGTGTTCAACTCAGTC
AAGGGTGGCGCCACTAACGTCGTCTTCTCCAACCTGAAGATGGATGCAAA
CTCCAAGTCAGACAACCCGCCCAAGAACACTGATGGCTTCGACATCGGCG
AGAGTACCTATGTAACCATCACTGAGGTCACCGTCGTCAACGATGATGAC
TGTGTGGCCCTGAAGCCCAGCTCCAACTACGTGACCGTCGACACCATCAG
CTGCACCGGCTCCCATGGCATTTCCGTGGGGTCGCTGGGCAAGTCCAGCG
ACGACTCGGTCAAGAATATCTATGTCACGGGCGCAACCATGATCAACTCC
ACCAAAGCCGCCGGAATCAAGACTTATCCGAGTGGAGGCGACCACGGCAC
TTCCACGGTCAGCAATGTGACGTTCACCGATTTCACCGTAGACAACTCCG
ACTATGCCTTCCAGATCCAGAGTTGTTATGGCGAGGACGATGACTACTGC
GAGGAGAACCCGGGCAACGCCAAGCTGACCGATATTGTCGTCTCGAGCTT
CAGCGGCACAACCAGTGACAAGTACGACCCGGTTGTGGCCAACATCGACT
GCGGTTCGGATGGAACGTGTGGCATCTCCATCAGTGGGTTCGATGTGAAG
GCGCCGTCGGGCAAGTCTGAAGTGCTGTGCGCCAACACCCCGTCTGACTT
GGGCGTCACCTGCACTTCAGGAGCATCGGGCTAA back to topCoding sequence (CDS) from alignment at KZ851949.1:177947..179230- >M747DRAFT_310074-T1 ID=M747DRAFT_310074-T1|Name=M747DRAFT_310074-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2442bp|location=Sequence derived from alignment at KZ851949.1:177947..179230- (Aspergillus niger ATCC 13496)
GTGGGATCTCTTTGCGAGTGACAGCAGTTACTCACGCCCAACGCTCCTGT
ACATCACTGGCGGCAGCAACCTCGAAATCTCCGGGCTGCGTCAGAAGAAC
CCACCCAACGTGTTCAACTCAGTCAAGGGTGGCGCCACTAACGTCGTCTT
CTCCAACCTGAAGATGGATGCAAACTCCAAGTCAGACAACCCGCCCAAGA
ACACTGATGGCTTCGACATCGGCGAGAGTACCTATGTAACCATCACTGAG
GTCACCGTCGTCAACGATGATGACTGTGTGGCCCTGAAGCCCAGCTCCAA
CTACGTGACCGTCGACACCATCAGCTGCACCGGCTCCCATGGCATTTCCG
TGGGGTCGCTGGGCAAGTCCAGCGACGACTCGGTCAAGAATATCTATGTC
ACGGGCGCAACCATGATCAACTCCACCAAAGCCGCCGGAATCAAGACTTA
TCCGAGTGGAGGCGACCACGGCACTTCCACGGTCAGCAATGTGACGTTCA
CCGATTTCACCGTAGACAACTCCGACTATGCCTTCCAGATCCAGAGTTGT
TATGGCGAGGACGATGACTACTGCGAGGAGAACCCGGGCAACGCCAAGCT
GACCGATATTGTCGTCTCGAGCTTCAGCGGCACAACCAGTGACAAGTACG
ACCCGGTTGTGGCCAACATCGACTGCGGTTCGGATGGAACGTGTGGCATC
TCCATCAGTGGGTTCGATGTGAAGGCGCCGTCGGGCAAGTCTGAAGTGCT
GTGCGCCAACACCCCGTCTGACTTGGGCGTCACCTGCACTTCAGGAGCAT
CGGGCTAAATGACGCTATATCGCAATCTTCTGCTTTTGGCCAGCCTTGGA
CTGAGCTATGCTGCTCCCTCTAAGGTCCAACGTGCCCCTGATTCGTCCCT
CCATGCTCGTGCCGTCTGTACCCCAACCGCAGGAGGCGATTCTTCCACCG
ACGATGTGCCCGCCATCACCGAGGCTCTCAGCTCGTGCGGGAACGGGGGC
ACCATTGTATTCCCGGAGGGCAGCACCTACTACCTCAACAGTGTGCTTGA
CTTGGGCAACTGCAGTAATTGCGACATCCAGGTGGAAGGTCTTTTGAAGT
TCGCCAGCGACACCGATTACTGGAGCGGTCGCACCGCCATGATCAGTGTA
TCCGATGTGGATGGCCTGAAGCTGCGCTCATTGACTGGGTCGGGTGTCAT
CGATGGCAATGGCCAGGATGCGTGGGATCTCTTTGCGAGTGACAGCAGTT
ACTCACGCCCAACGCTCCTGTACATCACTGGCGGCAGCAACCTCGAAATC
TCCGGGCTGCGTCAGAAGAACCCACCCAACGTGTTCAACTCAGTCAAGGG
TGGCGCCACTAACGTCGTCTTCTCCAACCTGAAGATGGATGCAAACTCCA
AGTCAGACAACCCGCCCAAGAACACTGATGGCTTCGACATCGGCGAGAGT
ACCTATGTAACCATCACTGAGGTCACCGTCGTCAACGATGATGACTGTGT
GGCCCTGAAGCCCAGCTCCAACTACGTGACCGTCGACACCATCAGCTGCA
CCGGCTCCCATGGCATTTCCGTGGGGTCGCTGGGCAAGTCCAGCGACGAC
TCGGTCAAGAATATCTATGTCACGGGCGCAACCATGATCAACTCCACCAA
AGCCGCCGGAATCAAGACTTATCCGAGTGGAGGCGACCACGGCACTTCCA
CGGTCAGCAATGTGACGTTCACCGATTTCACCGTAGACAACTCCGACTAT
GCCTTCCAGATCCAGAGTTGTTATGGCGAGGACGATGACTACTGCGAGGA
GAACCCGGGCAACGCCAAGCTGACCGATATTGTCGTCTCGAGCTTCAGCG
GCACAACCAGTGACAAGTACGACCCGGTTGTGGCCAACATCGACTGCGGT
TCGGATGGAACGTGTGGCATCTCCATCAGTGGGTTCGATGTGAAGGCGCC
GTCGGGCAAGTCTGAAGTGCTGTGCGCCAACACCCCGTCTGACTTGGGCG
TCACCTGCACTTCAGGAGCATCGGGCTAAATGACGCTATATCGCAATCTT
CTGCTTTTGGCCAGCCTTGGACTGAGCTATGCTGCTCCCTCTAAGGTCCA
ACGTGCCCCTGATTCGTCCCTCCATGCTCGTGCCGTCTGTACCCCAACCG
CAGGAGGCGATTCTTCCACCGACGATGTGCCCGCCATCACCGAGGCTCTC
AGCTCGTGCGGGAACGGGGGCACCATTGTATTCCCGGAGGGCAGCACCTA
CTACCTCAACAGTGTGCTTGACTTGGGCAACTGCAGTAATTGCGACATCC
AGGTGGAAGGTCTTTTGAAGTTCGCCAGCGACACCGATTACTGGAGCGGT
CGCACCGCCATGATCAGTGTATCCGATGTGGATGGCCTGAAGCTGCGCTC
ATTGACTGGGTCGGGTGTCATCGATGGCAATGGCCAGGATGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR006626 |
| DBxref | PFAM:PF00295 |
| Product | putative endo-xylogalacturonan hydrolase A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851949.1 | supercontig | KZ851949.1:177947..179230 - |
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