You are here

Home

M747DRAFT_310907-T1, M747DRAFT_310907-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_310907-T1
Unique NameM747DRAFT_310907-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851966.1:97218..98308-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_310907-T1 ID=M747DRAFT_310907-T1|Name=M747DRAFT_310907-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1091bp|location=Sequence derived from alignment at KZ851966.1:97218..98308- (Aspergillus niger ATCC 13496)
ATGCCGCGTGCTATCTGGACAAAAATTCTCTCGGATGTCTCCATCAAGAG
ATCATCCCAAACTCTCGCCATTCTCGCCAGCAACGCATACATCTATGGCG
GGGAGCTGCGGCCAAGAGAACCAGTCGATTCTGCTGTATACCGTATGTCT
TTTGATGCTTGTAAGTCGCCATAACTTTGACCACTCGGCAAGATCTATCA
GGACCATACTTTGATTGACACAGACTAGCAACATCCAGCAACCGAAGTCT
CATACAGACTCCCCCGTCTGCCACTCACCCCCAACCCCGCGTAGGATCCG
CCTCGACCGCTCTCGCCGGGAAACTCTATATCTTCTCTGGTCGGGGCGGT
ATCGCTATGGCCCCGATCGAGGAATTTGGCTCCTTCTGGGTCTTTGATCC
GACCCAGAATACCTGGTCGCAATTGCCCCCTGCAAACTCAAACTCGCAAC
ATCCTGCGGGCCGAAGCTACCACACGCTCACCAATAACGGCACAGACACT
ATCTATCTGCACGGTGGATGTCCATCGAGTGGCCGTCTACGCGATCTTTG
GGCCTTCAACATCCATTCCCGGCAATGGCTAGAGCTGCCTCCGGCGCCCG
GCCCTGAACGAGGCGGTGCGTCAATCGCGTACGCTGATCAGCGGATCTAC
CGGATGAACGGATTTGACGGAACCAGAGAGCAAGGCGGAGCTGTGGATGT
GTATGATGTGCGGACGAATGAGTGGACCAGTCTTACTTATGCAGCGGATG
GCGTTTCCGGACCCAGTCCGCGAAGTGTCGGCTGCTTGCTTGTCACAACC
ATCGCTGGAAAGCAGTCTCTGGTAACAATGTTTGGCGAGCATGATCCAAG
TAACCTGGGACACCAAGGTGCCGGGAAGATGCTAGCGGATGTGTGGGCAT
TTGATCTCCAATCTCAGCGGTGGGCACAGGTGGATGTTGCGGAGCCACAC
AGACCTCCGGCGCGTGGCTGGTTTGATGCGGACGTCATCGGCCCTGAAGC
ACATGCCAATCCTGGGAGCATCATAGTCCACGGTGGACTTGCGGAGTCAA
ATGAGCGGTTGGATGATGTGTGGCGACTGGATTTTGTCTAG
back to top

Coding sequence (CDS) from alignment at KZ851966.1:97218..98308-

>M747DRAFT_310907-T1 ID=M747DRAFT_310907-T1|Name=M747DRAFT_310907-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2046bp|location=Sequence derived from alignment at KZ851966.1:97218..98308- (Aspergillus niger ATCC 13496)
CAACATCCAGCAACCGAAGTCTCATACAGACTCCCCCGTCTGCCACTCAC
CCCCAACCCCGCGTAGGATCCGCCTCGACCGCTCTCGCCGGGAAACTCTA
TATCTTCTCTGGTCGGGGCGGTATCGCTATGGCCCCGATCGAGGAATTTG
GCTCCTTCTGGGTCTTTGATCCGACCCAGAATACCTGGTCGCAATTGCCC
CCTGCAAACTCAAACTCGCAACATCCTGCGGGCCGAAGCTACCACACGCT
CACCAATAACGGCACAGACACTATCTATCTGCACGGTGGATGTCCATCGA
GTGGCCGTCTACGCGATCTTTGGGCCTTCAACATCCATTCCCGGCAATGG
CTAGAGCTGCCTCCGGCGCCCGGCCCTGAACGAGGCGGTGCGTCAATCGC
GTACGCTGATCAGCGGATCTACCGGATGAACGGATTTGACGGAACCAGAG
AGCAAGGCGGAGCTGTGGATGTGTATGATGTGCGGACGAATGAGTGGACC
AGTCTTACTTATGCAGCGGATGGCGTTTCCGGACCCAGTCCGCGAAGTGT
CGGCTGCTTGCTTGTCACAACCATCGCTGGAAAGCAGTCTCTGGTAACAA
TGTTTGGCGAGCATGATCCAAGTAACCTGGGACACCAAGGTGCCGGGAAG
ATGCTAGCGGATGTGTGGGCATTTGATCTCCAATCTCAGCGGTGGGCACA
GGTGGATGTTGCGGAGCCACACAGACCTCCGGCGCGTGGCTGGTTTGATG
CGGACGTCATCGGCCCTGAAGCACATGCCAATCCTGGGAGCATCATAGTC
CACGGTGGACTTGCGGAGTCAAATGAGCGGTTGGATGATGTGTGGCGACT
GGATTTTGTCTAGATGCCGCGTGCTATCTGGACAAAAATTCTCTCGGATG
TCTCCATCAAGAGATCATCCCAAACTCTCGCCATTCTCGCCAGCAACGCA
TACATCTATGGCGGGGAGCTGCGGCCAAGAGAACCAGTCGATTCTGCTGT
ATACCGTATGTCTTTTGATGCTTCAACATCCAGCAACCGAAGTCTCATAC
AGACTCCCCCGTCTGCCACTCACCCCCAACCCCGCGTAGGATCCGCCTCG
ACCGCTCTCGCCGGGAAACTCTATATCTTCTCTGGTCGGGGCGGTATCGC
TATGGCCCCGATCGAGGAATTTGGCTCCTTCTGGGTCTTTGATCCGACCC
AGAATACCTGGTCGCAATTGCCCCCTGCAAACTCAAACTCGCAACATCCT
GCGGGCCGAAGCTACCACACGCTCACCAATAACGGCACAGACACTATCTA
TCTGCACGGTGGATGTCCATCGAGTGGCCGTCTACGCGATCTTTGGGCCT
TCAACATCCATTCCCGGCAATGGCTAGAGCTGCCTCCGGCGCCCGGCCCT
GAACGAGGCGGTGCGTCAATCGCGTACGCTGATCAGCGGATCTACCGGAT
GAACGGATTTGACGGAACCAGAGAGCAAGGCGGAGCTGTGGATGTGTATG
ATGTGCGGACGAATGAGTGGACCAGTCTTACTTATGCAGCGGATGGCGTT
TCCGGACCCAGTCCGCGAAGTGTCGGCTGCTTGCTTGTCACAACCATCGC
TGGAAAGCAGTCTCTGGTAACAATGTTTGGCGAGCATGATCCAAGTAACC
TGGGACACCAAGGTGCCGGGAAGATGCTAGCGGATGTGTGGGCATTTGAT
CTCCAATCTCAGCGGTGGGCACAGGTGGATGTTGCGGAGCCACACAGACC
TCCGGCGCGTGGCTGGTTTGATGCGGACGTCATCGGCCCTGAAGCACATG
CCAATCCTGGGAGCATCATAGTCCACGGTGGACTTGCGGAGTCAAATGAG
CGGTTGGATGATGTGTGGCGACTGGATTTTGTCTAGATGCCGCGTGCTAT
CTGGACAAAAATTCTCTCGGATGTCTCCATCAAGAGATCATCCCAAACTC
TCGCCATTCTCGCCAGCAACGCATACATCTATGGCGGGGAGCTGCGGCCA
AGAGAACCAGTCGATTCTGCTGTATACCGTATGTCTTTTGATGCTT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_310907M747DRAFT_310907Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_310907-T1M747DRAFT_310907-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_310907-T1.cdsM747DRAFT_310907-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_310907-T1.exon2M747DRAFT_310907-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_310907-T1.exon1M747DRAFT_310907-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR015915
DBxrefInterPro:IPR006652
DBxrefPFAM:PF13964
DBxrefPFAM:PF13418
DBxrefPFAM:PF13415
DBxrefPFAM:PF01344
Productgalactose oxidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851966.1supercontigKZ851966.1:97218..98308 -
Powered by Drupal