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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851911.1:572523..573848+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_314510-T1 ID=M747DRAFT_314510-T1|Name=M747DRAFT_314510-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1326bp|location=Sequence derived from alignment at KZ851911.1:572523..573848+ (Aspergillus niger ATCC 13496)
ATGAAGGTCCCCTTCCTCCAACTTCTCTGCCTAAATGCCGCCTTGGCTAG
CGCCAATGTTGTTAAAGGCGCGGCCCAGGGTTTCGCAGCCGGCGTGACAG
GCGGCGGCGATATAACTCCCAGCTACCCCAAAACCAACGAGGAGCTTGTC
TCCCTGCTCGAGAGCGACGAACCCCAAGTCGTCGTACTCACCAAGACCTT
TGAGTTCATCGGAACCGAGGGAACCACGACCGAGAATGGATGCGCACCCT
GGGGTACTGGGAAGTCCTGCCAGCTGGCCATCAACTCCAATGGATGGTGT
GGTAAAAATCCCGTCGTAACCATCACGTATGATAACGCCGCCAAGAATGG
CATTCATATCAAGTCCAACAAGACTCTTGTTGGTGAGGGAGACAAGGGCG
TGCTCAGCGGAAAGGGTCTCTACTTTGAGGGTGGTGTTTCCAATATCATC
GTGCAGAACATTAAGATTACGAACCTCAACCCTGGGTATGTATCATCCCA
GTAACTAGGAGTTCTCGAATGCTTTGGGAGACACCATATGTTCTAACGTT
TTTCACTACAGTTTTGTCTGGGGTGGCGACGCGTTTACTTTCTTTGGCGC
TGATCTGATCTGGATCGACCACTGCGAGGTAAGACAGAAATCTCCATCAT
CTGATAATCATAATTGAGTTTCTCACATTGACTTATGGATTAGACCTCCC
TCACCGGACGCCAACACTACGTGACCGGCTTCCACCCCAACACCCGCATG
ACTTGGTCCAACAACTTCCTTAACGGCGTAACCACCCACTCCGCAGGCTG
CGATGATCACCACTATTGGACAATGGAGCTAGTTGGCCCTGGGGACCAAA
TTACCTTCCAGAGTACGTGTCCCATGAAAACCTAAACGAAGCATCTATTC
GACTAACATACGTGTTCACTCACAGACAACTACGTCTACCACACCACCGG
CCGTGGACCCGCTCTCTCCGGCACGACCCTCTTCCACGCAGTCAACAGCG
TCTGGTCCTCCATCCCTGGACACGCCATCGAGGGCGGTGACAAGGGCCGC
GGTCTCTTCGAGGGATGCTTCTTCGAAGATGTTGTCGAGATTGCCCCCGC
CAAGCCCGAGAACCAACTCTTCAGCGCCAGCGAAGCCAACGCCGCATCTT
GCAAGTCCGCCTTGGGCCGCGCTTGCCAGGCCAATAGCTATAGCAAATCT
GGTGCTTTTGGCAGCTCTGAAACTGGCTTTTTCAAGGACTTTGCCGGACT
GACTATTGCACCGGCCGGCTCTGCGACGGATGCTCTCGCTTATGTTCCTA
AGAATTGTGGTATTGGGCGTCTTTGA back to topCoding sequence (CDS) from alignment at KZ851911.1:572523..573848+ >M747DRAFT_314510-T1 ID=M747DRAFT_314510-T1|Name=M747DRAFT_314510-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4488bp|location=Sequence derived from alignment at KZ851911.1:572523..573848+ (Aspergillus niger ATCC 13496)
ATGAAGGTCCCCTTCCTCCAACTTCTCTGCCTAAATGCCGCCTTGGCTAG
CGCCAATGTTGTTAAAGGCGCGGCCCAGGGTTTCGCAGCCGGCGTGACAG
GCGGCGGCGATATAACTCCCAGCTACCCCAAAACCAACGAGGAGCTTGTC
TCCCTGCTCGAGAGCGACGAACCCCAAGTCGTCGTACTCACCAAGACCTT
TGAGTTCATCGGAACCGAGGGAACCACGACCGAGAATGGATGCGCACCCT
GGGGTACTGGGAAGTCCTGCCAGCTGGCCATCAACTCCAATGGATGGTGT
GGTAAAAATCCCGTCGTAACCATCACGTATGATAACGCCGCCAAGAATGG
CATTCATATCAAGTCCAACAAGACTCTTGTTGGTGAGGGAGACAAGGGCG
TGCTCAGCGGAAAGGGTCTCTACTTTGAGGGTGGTGTTTCCAATATCATC
GTGCAGAACATTAAGATTACGAACCTCAACCCTGGTTTTGTCTGGGGTGG
CGACGCGTTTACTTTCTTTGGCGCTGATCTGATCTGGATCGACCACTGCG
AGACCTCCCTCACCGGACGCCAACACTACGTGACCGGCTTCCACCCCAAC
ACCCGCATGACTTGGTCCAACAACTTCCTTAACGGCGTAACCACCCACTC
CGCAGGCTGCGATGATCACCACTATTGGACAATGGAGCTAGTTGGCCCTG
GGGACCAAATTACCTTCCAGAACAACTACGTCTACCACACCACCGGCCGT
GGACCCGCTCTCTCCGGCACGACCCTCTTCCACGCAGTCAACAGCGTCTG
GTCCTCCATCCCTGGACACGCCATCGAGGGCGGTGACAAGGGCCGCGGTC
TCTTCGAGGGATGCTTCTTCGAAGATGTTGTCGAGATTGCCCCCGCCAAG
CCCGAGAACCAACTCTTCAGCGCCAGCGAAGCCAACGCCGCATCTTGCAA
GTCCGCCTTGGGCCGCGCTTGCCAGGCCAATAGCTATAGCAAATCTGGTG
CTTTTGGCAGCTCTGAAACTGGCTTTTTCAAGGACTTTGCCGGACTGACT
ATTGCACCGGCCGGCTCTGCGACGGATGCTCTCGCTTATGTTCCTAAGAA
TTGTGGTATTGGGCGTCTTTGAATGAAGGTCCCCTTCCTCCAACTTCTCT
GCCTAAATGCCGCCTTGGCTAGCGCCAATGTTGTTAAAGGCGCGGCCCAG
GGTTTCGCAGCCGGCGTGACAGGCGGCGGCGATATAACTCCCAGCTACCC
CAAAACCAACGAGGAGCTTGTCTCCCTGCTCGAGAGCGACGAACCCCAAG
TCGTCGTACTCACCAAGACCTTTGAGTTCATCGGAACCGAGGGAACCACG
ACCGAGAATGGATGCGCACCCTGGGGTACTGGGAAGTCCTGCCAGCTGGC
CATCAACTCCAATGGATGGTGTGGTAAAAATCCCGTCGTAACCATCACGT
ATGATAACGCCGCCAAGAATGGCATTCATATCAAGTCCAACAAGACTCTT
GTTGGTGAGGGAGACAAGGGCGTGCTCAGCGGAAAGGGTCTCTACTTTGA
GGGTGGTGTTTCCAATATCATCGTGCAGAACATTAAGATTACGAACCTCA
ACCCTGGTTTTGTCTGGGGTGGCGACGCGTTTACTTTCTTTGGCGCTGAT
CTGATCTGGATCGACCACTGCGAGACCTCCCTCACCGGACGCCAACACTA
CGTGACCGGCTTCCACCCCAACACCCGCATGACTTGGTCCAACAACTTCC
TTAACGGCGTAACCACCCACTCCGCAGGCTGCGATGATCACCACTATTGG
ACAATGGAGCTAGTTGGCCCTGGGGACCAAATTACCTTCCAGAACAACTA
CGTCTACCACACCACCGGCCGTGGACCCGCTCTCTCCGGCACGACCCTCT
TCCACGCAGTCAACAGCGTCTGGTCCTCCATCCCTGGACACGCCATCGAG
GGCGGTGACAAGGGCCGCGGTCTCTTCGAGGGATGCTTCTTCGAAGATGT
TGTCGAGATTGCCCCCGCCAAGCCCGAGAACCAACTCTTCAGCGCCAGCG
AAGCCAACGCCGCATCTTGCAAGTCCGCCTTGGGCCGCGCTTGCCAGGCC
AATAGCTATAGCAAATCTGGTGCTTTTGGCAGCTCTGAAACTGGCTTTTT
CAAGGACTTTGCCGGACTGACTATTGCACCGGCCGGCTCTGCGACGGATG
CTCTCGCTTATGTTCCTAAGAATTGTGGTATTGGGCGTCTTTGAATGAAG
GTCCCCTTCCTCCAACTTCTCTGCCTAAATGCCGCCTTGGCTAGCGCCAA
TGTTGTTAAAGGCGCGGCCCAGGGTTTCGCAGCCGGCGTGACAGGCGGCG
GCGATATAACTCCCAGCTACCCCAAAACCAACGAGGAGCTTGTCTCCCTG
CTCGAGAGCGACGAACCCCAAGTCGTCGTACTCACCAAGACCTTTGAGTT
CATCGGAACCGAGGGAACCACGACCGAGAATGGATGCGCACCCTGGGGTA
CTGGGAAGTCCTGCCAGCTGGCCATCAACTCCAATGGATGGTGTGGTAAA
AATCCCGTCGTAACCATCACGTATGATAACGCCGCCAAGAATGGCATTCA
TATCAAGTCCAACAAGACTCTTGTTGGTGAGGGAGACAAGGGCGTGCTCA
GCGGAAAGGGTCTCTACTTTGAGGGTGGTGTTTCCAATATCATCGTGCAG
AACATTAAGATTACGAACCTCAACCCTGGTTTTGTCTGGGGTGGCGACGC
GTTTACTTTCTTTGGCGCTGATCTGATCTGGATCGACCACTGCGAGACCT
CCCTCACCGGACGCCAACACTACGTGACCGGCTTCCACCCCAACACCCGC
ATGACTTGGTCCAACAACTTCCTTAACGGCGTAACCACCCACTCCGCAGG
CTGCGATGATCACCACTATTGGACAATGGAGCTAGTTGGCCCTGGGGACC
AAATTACCTTCCAGAACAACTACGTCTACCACACCACCGGCCGTGGACCC
GCTCTCTCCGGCACGACCCTCTTCCACGCAGTCAACAGCGTCTGGTCCTC
CATCCCTGGACACGCCATCGAGGGCGGTGACAAGGGCCGCGGTCTCTTCG
AGGGATGCTTCTTCGAAGATGTTGTCGAGATTGCCCCCGCCAAGCCCGAG
AACCAACTCTTCAGCGCCAGCGAAGCCAACGCCGCATCTTGCAAGTCCGC
CTTGGGCCGCGCTTGCCAGGCCAATAGCTATAGCAAATCTGGTGCTTTTG
GCAGCTCTGAAACTGGCTTTTTCAAGGACTTTGCCGGACTGACTATTGCA
CCGGCCGGCTCTGCGACGGATGCTCTCGCTTATGTTCCTAAGAATTGTGG
TATTGGGCGTCTTTGAATGAAGGTCCCCTTCCTCCAACTTCTCTGCCTAA
ATGCCGCCTTGGCTAGCGCCAATGTTGTTAAAGGCGCGGCCCAGGGTTTC
GCAGCCGGCGTGACAGGCGGCGGCGATATAACTCCCAGCTACCCCAAAAC
CAACGAGGAGCTTGTCTCCCTGCTCGAGAGCGACGAACCCCAAGTCGTCG
TACTCACCAAGACCTTTGAGTTCATCGGAACCGAGGGAACCACGACCGAG
AATGGATGCGCACCCTGGGGTACTGGGAAGTCCTGCCAGCTGGCCATCAA
CTCCAATGGATGGTGTGGTAAAAATCCCGTCGTAACCATCACGTATGATA
ACGCCGCCAAGAATGGCATTCATATCAAGTCCAACAAGACTCTTGTTGGT
GAGGGAGACAAGGGCGTGCTCAGCGGAAAGGGTCTCTACTTTGAGGGTGG
TGTTTCCAATATCATCGTGCAGAACATTAAGATTACGAACCTCAACCCTG
GTTTTGTCTGGGGTGGCGACGCGTTTACTTTCTTTGGCGCTGATCTGATC
TGGATCGACCACTGCGAGACCTCCCTCACCGGACGCCAACACTACGTGAC
CGGCTTCCACCCCAACACCCGCATGACTTGGTCCAACAACTTCCTTAACG
GCGTAACCACCCACTCCGCAGGCTGCGATGATCACCACTATTGGACAATG
GAGCTAGTTGGCCCTGGGGACCAAATTACCTTCCAGAACAACTACGTCTA
CCACACCACCGGCCGTGGACCCGCTCTCTCCGGCACGACCCTCTTCCACG
CAGTCAACAGCGTCTGGTCCTCCATCCCTGGACACGCCATCGAGGGCGGT
GACAAGGGCCGCGGTCTCTTCGAGGGATGCTTCTTCGAAGATGTTGTCGA
GATTGCCCCCGCCAAGCCCGAGAACCAACTCTTCAGCGCCAGCGAAGCCA
ACGCCGCATCTTGCAAGTCCGCCTTGGGCCGCGCTTGCCAGGCCAATAGC
TATAGCAAATCTGGTGCTTTTGGCAGCTCTGAAACTGGCTTTTTCAAGGA
CTTTGCCGGACTGACTATTGCACCGGCCGGCTCTGCGACGGATGCTCTCG
CTTATGTTCCTAAGAATTGTGGTATTGGGCGTCTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:PL1 |
| Note | CAZy:PL1_4 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR002022 |
| DBxref | PFAM:PF00544 |
| Product | pectin lyase-like protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851911.1 | supercontig | KZ851911.1:572523..573848 + |
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