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M747DRAFT_314642-T1, M747DRAFT_314642-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_314642-T1
Unique NameM747DRAFT_314642-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:190101..190857+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_314642-T1 ID=M747DRAFT_314642-T1|Name=M747DRAFT_314642-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=757bp|location=Sequence derived from alignment at KZ851912.1:190101..190857+ (Aspergillus niger ATCC 13496)
ATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCG
CATCCAGAAGCTCGTGCTCAACATCTCCGTCGGCGAGTCTGGTGACAGAC
TTACTCGCGCTGCTAAGGTGCTTGAGCAGCTGAGCGGTCAGACTCCGGTC
TACAGTAAGAACGCCCGATCCCGATGAATCCGAGAAATCCGAACACGAAG
CAGCCGAGGAAGAAGGATATGACAACTGTATTATGGAATGGATGGCTGAT
GGGATGATTTTTTCAACGTTTAGGCAAGGCCCGTTATACCGTCCGTACCT
TCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGT
CCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGA
GCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCT
CCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTATCTAC
GGCATGGACTTCTACTGCTGCATGTGAGTGCATTTGGACCTCTACGCAGT
CCTGGTTCGACAGATCCATCGGTGTCAATCCAGATCGAGCAGGACAAGTC
GAGTATCAGCAACTGACTTGGAATCAATAGGACCCGCCCTGGTGAGCGTG
TCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTATC
ACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGTATCGT
CCGGTAA
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Coding sequence (CDS) from alignment at KZ851912.1:190101..190857+

>M747DRAFT_314642-T1 ID=M747DRAFT_314642-T1|Name=M747DRAFT_314642-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1593bp|location=Sequence derived from alignment at KZ851912.1:190101..190857+ (Aspergillus niger ATCC 13496)
ATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCG
CATCCAGAAGCTCGTGCTCAACATCTCCGTCGGCGAGTCTGGTGACAGAC
TTACTCGCGCTGCTAAGGTGCTTGAGCAGCTGAGCGGTCAGACTCCGGTC
TACAGCAAGGCCCGTTATACCGTCCGTACCTTCGGTATCCGTCGTAACGA
GAAGATCTCCGTCCACGTTACCGTCCGTGGTCCCAAGGCCGAGGAGATCC
TTGAGCGTGGTCTCAAGGTCAAGGAGTACGAGCTCCGCAAGCGCAACTTC
TCTGAGACCGGTAACTTCGGTTTCGGTATCTCCGAGCACATCGATCTGGG
TATCAAGTACGACCCCGGTATCGGTATCTACGGCATGGACTTCTACTGCT
GCATGACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGCCGCTGCAAGGCC
CGTATCGGCTCCCAGCACCGTATCACCCAGAACGAGACCATCAAGTGGTT
CAAGAACCGCTTCGACGGTATCGTCCGGTAAATGCAGTCGGAATCCAAGG
ACAAGTCCGCCAACCCTATGCGCGAGCTGCGCATCCAGAAGCTCGTGCTC
AACATCTCCGTCGGCGAGTCTGGTGACAGACTTACTCGCGCTGCTAAGGT
GCTTGAGCAGCTGAGCGGTCAGACTCCGGTCTACAGCAAGGCCCGTTATA
CCGTCCGTACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTT
ACCGTCCGTGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGT
CAAGGAGTACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCG
GTTTCGGTATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGT
ATCGGTATCTACGGCATGGACTTCTACTGCTGCATGACCCGCCCTGGTGA
GCGTGTCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACC
GTATCACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGT
ATCGTCCGGTAAATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTAT
GCGCGAGCTGCGCATCCAGAAGCTCGTGCTCAACATCTCCGTCGGCGAGT
CTGGTGACAGACTTACTCGCGCTGCTAAGGTGCTTGAGCAGCTGAGCGGT
CAGACTCCGGTCTACAGCAAGGCCCGTTATACCGTCCGTACCTTCGGTAT
CCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGTCCCAAGG
CCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGAGCTCCGC
AAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCTCCGAGCA
CATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTATCTACGGCATGG
ACTTCTACTGCTGCATGACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGC
CGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTATCACCCAGAACGAGAC
CATCAAGTGGTTCAAGAACCGCTTCGACGGTATCGTCCGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL11M747DRAFT_314642Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_314642-T1.exon1M747DRAFT_314642-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_314642-T1.exon2M747DRAFT_314642-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_314642-T1.exon3M747DRAFT_314642-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_314642-T1.cdsM747DRAFT_314642-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_314642-T1M747DRAFT_314642-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264X8J
DBxrefInterPro:IPR020929
DBxrefInterPro:IPR031310
DBxrefInterPro:IPR002132
DBxrefInterPro:IPR031309
DBxrefInterPro:IPR022803
DBxrefPFAM:PF00673
DBxrefPFAM:PF00281
Product60S ribosomal protein L11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:190101..190857 +
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