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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851918.1:282765..284567+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_315698-T1 ID=M747DRAFT_315698-T1|Name=M747DRAFT_315698-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1803bp|location=Sequence derived from alignment at KZ851918.1:282765..284567+ (Aspergillus niger ATCC 13496)
ATGACCCTTGATGCTGAAGTCCAGATAGATCGCAAGGTTAAAAAATATGG
GGGACACGTTAGCAAGGGAGATGTCGAATCCACTGAGACTACTGGACCAG
ATAACCTGGAATCGGATTGGAAACCGACTAAAGAGGTTTTCTTGATCCTA
CTGTGCTTGTCAATCATTGCAATCATGGCTTCGTTGGACATGACTATATT
TTTATCAATCCTTCCAGCGAGTGTCCTCCTCATTGCTCAAACCACCCCTC
AAACCATTGATAACTTCTAATTGCTGAAACAGAGTATTGCCAAGGACTTG
AACGGTGATGCCACCAGCACTTTTTGGGTGGGCAGCGCATACTTGGTGCC
TAGTGCAGGGTTTCAGCCCATTATGGCTTCTTTTTCCGACGTTTATGGGA
GAAGAAGAGTACTGGCCATGGCATTGGCCCTCTTCGTGATTGGCTCAATT
GTGGGATGTCTCGCCCATAATATGGCTACACTTCTCGCCGGGCGTGTCAT
TCAAGGAATCGGAGGAGGCGGACTCATTCCGCTTGCGACGATTATAATTA
CAGATGTAGTGCCTCTACGTCCCAGGCCAAAATATGCTGCCTTGGTTCAG
GCATCCATGGCACTCGGTACTATGCTTGGGCCTCTAATAGGCGGTGCCTT
TTTGGAACATACCAGTAGCTCAACGGGCTGGCGCTGGGTGTTTTACATCA
ACTTCCCCCTATCCACCGTTGCCGGAATTTTGCTTTTCTTTTCGGTCAGG
TTCAAAAGGGGCGGGGCTCAGCTTCGTGCCGTTGATTGGTTTGGCCAAGC
TTTGTTCCTGGCCAGTATCTCCATATTCCTGATCGGCCTCTCGTGGGGTG
GAGTGCAGTACACATGGGAAAGCTATCACACTTTGGTTCCATTGTGTCTT
GGGGTTGGAGGTATTGTCGCGACGGTGTGTTGGGAAATCCTGGGGACTGA
GCATCCTTTTGTGAGGATTTCTGTGCTTCAAGATCGATCTGCTTTGGCTG
TGTATGCGGGGTCTATTGTCCAAGGAATTCTAGTAAGTTCTTGTATTGGC
GCAATTTGGCACTTTGTATAATAGGCCCTTACTGACCCTCAACTAATTTC
TTAGATGTATGGCGAGCTTTATTATATTTCTGTGTATCTGCAGGCTGTGA
AAAGCATGTCCGCGGTCATGACTGGTGTTGGCCTCCTCCCAGTATCGGTT
GCGCTCATGCCCACAAGTATAGTCGTGGCTATTTTCATTTCGAAAACTGG
ACGCTACCGCTGGGCGCTATGGTTTGGTTGGGCCGCTACCATTGCAGCAA
CGGGTGTGACCATTATTCTGGACAGTGATACCAACACAGCCAGCTGGATC
TTCATTTTTGCCTTCGTTGGTTTTGGGCATGGAGTGCTATTCAATGCGCT
TTTAATCTCAGCACAAGCCTCGTGTGCAGCAGCCGACGCAGCATATGCAG
CTTCGATGTATACCTTCTTCCGCACGCTAGGCTTTGCTATTGGAGTGATA
ATCGGCTCTACTGTCTTACAGAACTTCATGTCCATGAAACTCCACGAATT
GGACCTTCCGACTGCGATCGCTCAAAATGCGGAAGGCTTCATTGAAACTC
TTAAAACACTAGCCAGCGGGTCAGCTCTGCGTGAAGGTGTTCTAACCGCC
TATGTGTATGCCTTGGACTCAATCTTTGAGGTTCTGACAGGTATTGGAGT
TCTGGGCCTTTTAGCCACTGCATTCGTTGCGGCAAAAACTATGAACAAGC
CGATTGAGTCTGACCATGTTTTACACGACACTTGTGACTCGGCCAAGAAT
TGA back to topCoding sequence (CDS) from alignment at KZ851918.1:282765..284567+ >M747DRAFT_315698-T1 ID=M747DRAFT_315698-T1|Name=M747DRAFT_315698-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6444bp|location=Sequence derived from alignment at KZ851918.1:282765..284567+ (Aspergillus niger ATCC 13496)
ATGACCCTTGATGCTGAAGTCCAGATAGATCGCAAGGTTAAAAAATATGG
GGGACACGTTAGCAAGGGAGATGTCGAATCCACTGAGACTACTGGACCAG
ATAACCTGGAATCGGATTGGAAACCGACTAAAGAGGTTTTCTTGATCCTA
CTGTGCTTGTCAATCATTGCAATCATGGCTTCGTTGGACATGACTATATT
TTTATCAATCCTTCCAAGTATTGCCAAGGACTTGAACGGTGATGCCACCA
GCACTTTTTGGGTGGGCAGCGCATACTTGGTGCCTAGTGCAGGGTTTCAG
CCCATTATGGCTTCTTTTTCCGACGTTTATGGGAGAAGAAGAGTACTGGC
CATGGCATTGGCCCTCTTCGTGATTGGCTCAATTGTGGGATGTCTCGCCC
ATAATATGGCTACACTTCTCGCCGGGCGTGTCATTCAAGGAATCGGAGGA
GGCGGACTCATTCCGCTTGCGACGATTATAATTACAGATGTAGTGCCTCT
ACGTCCCAGGCCAAAATATGCTGCCTTGGTTCAGGCATCCATGGCACTCG
GTACTATGCTTGGGCCTCTAATAGGCGGTGCCTTTTTGGAACATACCAGT
AGCTCAACGGGCTGGCGCTGGGTGTTTTACATCAACTTCCCCCTATCCAC
CGTTGCCGGAATTTTGCTTTTCTTTTCGGTCAGGTTCAAAAGGGGCGGGG
CTCAGCTTCGTGCCGTTGATTGGTTTGGCCAAGCTTTGTTCCTGGCCAGT
ATCTCCATATTCCTGATCGGCCTCTCGTGGGGTGGAGTGCAGTACACATG
GGAAAGCTATCACACTTTGGTTCCATTGTGTCTTGGGGTTGGAGGTATTG
TCGCGACGGTGTGTTGGGAAATCCTGGGGACTGAGCATCCTTTTGTGAGG
ATTTCTGTGCTTCAAGATCGATCTGCTTTGGCTGTGTATGCGGGGTCTAT
TGTCCAAGGAATTCTAATGTATGGCGAGCTTTATTATATTTCTGTGTATC
TGCAGGCTGTGAAAAGCATGTCCGCGGTCATGACTGGTGTTGGCCTCCTC
CCAGTATCGGTTGCGCTCATGCCCACAAGTATAGTCGTGGCTATTTTCAT
TTCGAAAACTGGACGCTACCGCTGGGCGCTATGGTTTGGTTGGGCCGCTA
CCATTGCAGCAACGGGTGTGACCATTATTCTGGACAGTGATACCAACACA
GCCAGCTGGATCTTCATTTTTGCCTTCGTTGGTTTTGGGCATGGAGTGCT
ATTCAATGCGCTTTTAATCTCAGCACAAGCCTCGTGTGCAGCAGCCGACG
CAGCATATGCAGCTTCGATGTATACCTTCTTCCGCACGCTAGGCTTTGCT
ATTGGAGTGATAATCGGCTCTACTGTCTTACAGAACTTCATGTCCATGAA
ACTCCACGAATTGGACCTTCCGACTGCGATCGCTCAAAATGCGGAAGGCT
TCATTGAAACTCTTAAAACACTAGCCAGCGGGTCAGCTCTGCGTGAAGGT
ATTGGAGTTCTGGGCCTTTTAGCCACTGCATTCGTTGCGGCAAAAACTAT
GAACAAGCCGATTGAGTCTGACCATGTTTTACACGACACTTGTGACTCGG
CCAAGAATTGAATGACCCTTGATGCTGAAGTCCAGATAGATCGCAAGGTT
AAAAAATATGGGGGACACGTTAGCAAGGGAGATGTCGAATCCACTGAGAC
TACTGGACCAGATAACCTGGAATCGGATTGGAAACCGACTAAAGAGGTTT
TCTTGATCCTACTGTGCTTGTCAATCATTGCAATCATGGCTTCGTTGGAC
ATGACTATATTTTTATCAATCCTTCCAAGTATTGCCAAGGACTTGAACGG
TGATGCCACCAGCACTTTTTGGGTGGGCAGCGCATACTTGGTGCCTAGTG
CAGGGTTTCAGCCCATTATGGCTTCTTTTTCCGACGTTTATGGGAGAAGA
AGAGTACTGGCCATGGCATTGGCCCTCTTCGTGATTGGCTCAATTGTGGG
ATGTCTCGCCCATAATATGGCTACACTTCTCGCCGGGCGTGTCATTCAAG
GAATCGGAGGAGGCGGACTCATTCCGCTTGCGACGATTATAATTACAGAT
GTAGTGCCTCTACGTCCCAGGCCAAAATATGCTGCCTTGGTTCAGGCATC
CATGGCACTCGGTACTATGCTTGGGCCTCTAATAGGCGGTGCCTTTTTGG
AACATACCAGTAGCTCAACGGGCTGGCGCTGGGTGTTTTACATCAACTTC
CCCCTATCCACCGTTGCCGGAATTTTGCTTTTCTTTTCGGTCAGGTTCAA
AAGGGGCGGGGCTCAGCTTCGTGCCGTTGATTGGTTTGGCCAAGCTTTGT
TCCTGGCCAGTATCTCCATATTCCTGATCGGCCTCTCGTGGGGTGGAGTG
CAGTACACATGGGAAAGCTATCACACTTTGGTTCCATTGTGTCTTGGGGT
TGGAGGTATTGTCGCGACGGTGTGTTGGGAAATCCTGGGGACTGAGCATC
CTTTTGTGAGGATTTCTGTGCTTCAAGATCGATCTGCTTTGGCTGTGTAT
GCGGGGTCTATTGTCCAAGGAATTCTAATGTATGGCGAGCTTTATTATAT
TTCTGTGTATCTGCAGGCTGTGAAAAGCATGTCCGCGGTCATGACTGGTG
TTGGCCTCCTCCCAGTATCGGTTGCGCTCATGCCCACAAGTATAGTCGTG
GCTATTTTCATTTCGAAAACTGGACGCTACCGCTGGGCGCTATGGTTTGG
TTGGGCCGCTACCATTGCAGCAACGGGTGTGACCATTATTCTGGACAGTG
ATACCAACACAGCCAGCTGGATCTTCATTTTTGCCTTCGTTGGTTTTGGG
CATGGAGTGCTATTCAATGCGCTTTTAATCTCAGCACAAGCCTCGTGTGC
AGCAGCCGACGCAGCATATGCAGCTTCGATGTATACCTTCTTCCGCACGC
TAGGCTTTGCTATTGGAGTGATAATCGGCTCTACTGTCTTACAGAACTTC
ATGTCCATGAAACTCCACGAATTGGACCTTCCGACTGCGATCGCTCAAAA
TGCGGAAGGCTTCATTGAAACTCTTAAAACACTAGCCAGCGGGTCAGCTC
TGCGTGAAGGTATTGGAGTTCTGGGCCTTTTAGCCACTGCATTCGTTGCG
GCAAAAACTATGAACAAGCCGATTGAGTCTGACCATGTTTTACACGACAC
TTGTGACTCGGCCAAGAATTGAATGACCCTTGATGCTGAAGTCCAGATAG
ATCGCAAGGTTAAAAAATATGGGGGACACGTTAGCAAGGGAGATGTCGAA
TCCACTGAGACTACTGGACCAGATAACCTGGAATCGGATTGGAAACCGAC
TAAAGAGGTTTTCTTGATCCTACTGTGCTTGTCAATCATTGCAATCATGG
CTTCGTTGGACATGACTATATTTTTATCAATCCTTCCAAGTATTGCCAAG
GACTTGAACGGTGATGCCACCAGCACTTTTTGGGTGGGCAGCGCATACTT
GGTGCCTAGTGCAGGGTTTCAGCCCATTATGGCTTCTTTTTCCGACGTTT
ATGGGAGAAGAAGAGTACTGGCCATGGCATTGGCCCTCTTCGTGATTGGC
TCAATTGTGGGATGTCTCGCCCATAATATGGCTACACTTCTCGCCGGGCG
TGTCATTCAAGGAATCGGAGGAGGCGGACTCATTCCGCTTGCGACGATTA
TAATTACAGATGTAGTGCCTCTACGTCCCAGGCCAAAATATGCTGCCTTG
GTTCAGGCATCCATGGCACTCGGTACTATGCTTGGGCCTCTAATAGGCGG
TGCCTTTTTGGAACATACCAGTAGCTCAACGGGCTGGCGCTGGGTGTTTT
ACATCAACTTCCCCCTATCCACCGTTGCCGGAATTTTGCTTTTCTTTTCG
GTCAGGTTCAAAAGGGGCGGGGCTCAGCTTCGTGCCGTTGATTGGTTTGG
CCAAGCTTTGTTCCTGGCCAGTATCTCCATATTCCTGATCGGCCTCTCGT
GGGGTGGAGTGCAGTACACATGGGAAAGCTATCACACTTTGGTTCCATTG
TGTCTTGGGGTTGGAGGTATTGTCGCGACGGTGTGTTGGGAAATCCTGGG
GACTGAGCATCCTTTTGTGAGGATTTCTGTGCTTCAAGATCGATCTGCTT
TGGCTGTGTATGCGGGGTCTATTGTCCAAGGAATTCTAATGTATGGCGAG
CTTTATTATATTTCTGTGTATCTGCAGGCTGTGAAAAGCATGTCCGCGGT
CATGACTGGTGTTGGCCTCCTCCCAGTATCGGTTGCGCTCATGCCCACAA
GTATAGTCGTGGCTATTTTCATTTCGAAAACTGGACGCTACCGCTGGGCG
CTATGGTTTGGTTGGGCCGCTACCATTGCAGCAACGGGTGTGACCATTAT
TCTGGACAGTGATACCAACACAGCCAGCTGGATCTTCATTTTTGCCTTCG
TTGGTTTTGGGCATGGAGTGCTATTCAATGCGCTTTTAATCTCAGCACAA
GCCTCGTGTGCAGCAGCCGACGCAGCATATGCAGCTTCGATGTATACCTT
CTTCCGCACGCTAGGCTTTGCTATTGGAGTGATAATCGGCTCTACTGTCT
TACAGAACTTCATGTCCATGAAACTCCACGAATTGGACCTTCCGACTGCG
ATCGCTCAAAATGCGGAAGGCTTCATTGAAACTCTTAAAACACTAGCCAG
CGGGTCAGCTCTGCGTGAAGGTATTGGAGTTCTGGGCCTTTTAGCCACTG
CATTCGTTGCGGCAAAAACTATGAACAAGCCGATTGAGTCTGACCATGTT
TTACACGACACTTGTGACTCGGCCAAGAATTGAATGACCCTTGATGCTGA
AGTCCAGATAGATCGCAAGGTTAAAAAATATGGGGGACACGTTAGCAAGG
GAGATGTCGAATCCACTGAGACTACTGGACCAGATAACCTGGAATCGGAT
TGGAAACCGACTAAAGAGGTTTTCTTGATCCTACTGTGCTTGTCAATCAT
TGCAATCATGGCTTCGTTGGACATGACTATATTTTTATCAATCCTTCCAA
GTATTGCCAAGGACTTGAACGGTGATGCCACCAGCACTTTTTGGGTGGGC
AGCGCATACTTGGTGCCTAGTGCAGGGTTTCAGCCCATTATGGCTTCTTT
TTCCGACGTTTATGGGAGAAGAAGAGTACTGGCCATGGCATTGGCCCTCT
TCGTGATTGGCTCAATTGTGGGATGTCTCGCCCATAATATGGCTACACTT
CTCGCCGGGCGTGTCATTCAAGGAATCGGAGGAGGCGGACTCATTCCGCT
TGCGACGATTATAATTACAGATGTAGTGCCTCTACGTCCCAGGCCAAAAT
ATGCTGCCTTGGTTCAGGCATCCATGGCACTCGGTACTATGCTTGGGCCT
CTAATAGGCGGTGCCTTTTTGGAACATACCAGTAGCTCAACGGGCTGGCG
CTGGGTGTTTTACATCAACTTCCCCCTATCCACCGTTGCCGGAATTTTGC
TTTTCTTTTCGGTCAGGTTCAAAAGGGGCGGGGCTCAGCTTCGTGCCGTT
GATTGGTTTGGCCAAGCTTTGTTCCTGGCCAGTATCTCCATATTCCTGAT
CGGCCTCTCGTGGGGTGGAGTGCAGTACACATGGGAAAGCTATCACACTT
TGGTTCCATTGTGTCTTGGGGTTGGAGGTATTGTCGCGACGGTGTGTTGG
GAAATCCTGGGGACTGAGCATCCTTTTGTGAGGATTTCTGTGCTTCAAGA
TCGATCTGCTTTGGCTGTGTATGCGGGGTCTATTGTCCAAGGAATTCTAA
TGTATGGCGAGCTTTATTATATTTCTGTGTATCTGCAGGCTGTGAAAAGC
ATGTCCGCGGTCATGACTGGTGTTGGCCTCCTCCCAGTATCGGTTGCGCT
CATGCCCACAAGTATAGTCGTGGCTATTTTCATTTCGAAAACTGGACGCT
ACCGCTGGGCGCTATGGTTTGGTTGGGCCGCTACCATTGCAGCAACGGGT
GTGACCATTATTCTGGACAGTGATACCAACACAGCCAGCTGGATCTTCAT
TTTTGCCTTCGTTGGTTTTGGGCATGGAGTGCTATTCAATGCGCTTTTAA
TCTCAGCACAAGCCTCGTGTGCAGCAGCCGACGCAGCATATGCAGCTTCG
ATGTATACCTTCTTCCGCACGCTAGGCTTTGCTATTGGAGTGATAATCGG
CTCTACTGTCTTACAGAACTTCATGTCCATGAAACTCCACGAATTGGACC
TTCCGACTGCGATCGCTCAAAATGCGGAAGGCTTCATTGAAACTCTTAAA
ACACTAGCCAGCGGGTCAGCTCTGCGTGAAGGTATTGGAGTTCTGGGCCT
TTTAGCCACTGCATTCGTTGCGGCAAAAACTATGAACAAGCCGATTGAGT
CTGACCATGTTTTACACGACACTTGTGACTCGGCCAAGAATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519181.1 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | efflux pump antibiotic resistance protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851918.1 | supercontig | KZ851918.1:282765..284567 + |
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