You are here

Home

M747DRAFT_316278-T1, M747DRAFT_316278-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_316278-T1
Unique NameM747DRAFT_316278-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851923.1:11396..13699-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_316278-T1 ID=M747DRAFT_316278-T1|Name=M747DRAFT_316278-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2304bp|location=Sequence derived from alignment at KZ851923.1:11396..13699- (Aspergillus niger ATCC 13496)
ATGGGAAGGCTCATCAAAAATCACTGGGCGCGACTTATTATTCTCACAGC
CTCAGCTTGTATGTACAAGTCCCTTTTCATCCACTTCATCTTTCAACGCT
AATCTGCGTGACTGGATCTATAGACCAAATCGGCGGTGCGATCGAAGGCT
TCATCTGGCCGAAGGTGTTCTGGGATTTTATGACGGACAATTTGAATGGC
GCTGTGAACCCGGTCCCTGTGCTACAAATTCTCAACCTCCTTTTGGGCCT
ACTCGGCCTTGCATGGGAATGGCCTTTGAAATATGTTGCCGGCTCCCTCG
CGCACCGCAGCATCGAGTTCCGATTGATCTTCTATCCCCTCAGCGCTCTA
CTCTCCATGCTCCTCTACCAGGGCACGGACCCTGCTCTGTACTACCTTAT
TGGAATCGGGGTGTATTTCTGGGCCTACAGCGAGGGCGAGGTATGTATTC
TGCGACCGACTTGATCAATGTCATGGCTAACCGACAATAGGTCGTTTGCC
CTATCCCATGGACACTCCCGAAGCGAAGCGAATACAAGGTATAGCATGAC
TTGTACCAACACGGCACCTTACACTTAACGACCACGATATGATATGATTT
TATGAAACGATACCCAGCAGTGCTAGTATATCGGTAATATGTGTTTCTTG
GAGTTGGGACAGATAAAAGGTCCTCTTTCAGTCAGTGATGACTGTCCAGC
TATTGACCTGGATTGTGTGGCAGTTATGCAAATATGGACTCTGTTACCTG
GATTGCCAGAGTGCATGTATCTGTCTGTATTATAGTTCATTTCTACATGG
AATCAGAAAAATATATATCGTACAGAATGTCTTGTACAACACACCCATAT
GATCCGTAGTCGACAAAAGAGGCCCCCCCGACATGCCAAATTTATGTGCA
AGTAATGCTTTGCACTGTGGAACAACAATGTACCATTGGTACTTATGCCC
AATCTGGCATATCCACAGTACTTTTATTGATGCCTGGTTGCCACTTTACT
GAGGCAAAAATAATCCACGTGATCCCGTGTCCAATAATACCCAAAACGGT
TAAGCGTCTGGAGCGCTCCAGACCGAGGAACAAGAGATGAGGCAAATCAC
CAGCAACCAAGGAAAAGCTTTTAGCGATCCCCTGAAATAATGCCTATATA
AATCTATCAACATCACTAACCGGTCGAATATCTGCAGCATCACTGTCACT
AACACAGACAACTTTCTCAGCACCAGTCCTACAGCCAGCCAGCCAGCCAG
CCAGCTAGCAAACAGCATGCCCCTAGTCGAAGACAGTCCTCGCGAGGACA
TCGACGCGATCCAAATACCCTCTACAACCCCCAGTCACGACAATGAAGCT
CATAATGAAGAACACTACGACGATAACGACGTCCCCGTCAACAGAAAAAC
CAGCTTTGGTGGTCGTCTTAATCAATACTTCCACACAGCAAAACCCACAT
CATCAGCGCCACCAGCACTCCCATCCACGAAACAAATCACTACCAGCACT
TCCTCTCCTCTCAAACGCAAACGAACCACACCACCAACAGCACTCATAAC
ACGGATAACCCGCTCGCGCTCCCGCTCCTCCACCTCAACCCCAACCAGCA
CCACCACGACTACCTCCTCCCCACGCCCACGCAAAACCCCCACACCCACA
CCCCCCACCTCCTCAGCAGCAGACTCCCTCCTCGTCGACACCATCCCACC
CAACCTAACCCTCCTCCTCGTGGGTGTAAACCCGGGGGTTCTAACGGGCG
TAACAGGCTACGCCTACGCACACCCGAGCAACCTCTTCTGGAAGCTCCTG
CACTGGTCCGGGATCACACCCATCCGCCACCCACCCTCCGATACATACAA
ACTTCCCGAACTATATAACATCGGCAACACGAATATTGTGGAGCGTCCGA
CGCGGGACGCGAGTATGCTCAGCAAGAAGGAGATGGATGCAGGAGTACCG
GTTCTGGAAGAGAAGGTGAGGGAGAAAAGACCGGAAGTGGTGTGTCTTGT
GGGCAAGAGTATCTGGGAGGCGGTTTGGAGGGTTAAGGTTGGACGGGGGA
TTAGGAAGGAAGAGTTTAGGTATGGGTGGCAGGATTTGGAGATGAATATG
GGGAGAGTGGGTGGTGAAGGCGGGTGGGAGGGGGCCAGGGTGTTTGTGGC
TACGACTACTAGTGGGTTGGCGGCGGGGATGTCGTTGCAGGAGAAGAGGG
AGGTTTGGGATGAGTTGGGGAGGTGGGTTTGTGAGAGGAGGAAAGTATGG
GAGAGGGAAAGGGAGAAGGTGGAAGTTGGTGGTGATGATACTAAAGTAGA
ATAG
back to top

Coding sequence (CDS) from alignment at KZ851923.1:11396..13699-

>M747DRAFT_316278-T1 ID=M747DRAFT_316278-T1|Name=M747DRAFT_316278-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4203bp|location=Sequence derived from alignment at KZ851923.1:11396..13699- (Aspergillus niger ATCC 13496)
ACAGTCCTCGCGAGGACATCGACGCGATCCAAATACCCTCTACAACCCCC
AGTCACGACAATGAAGCTCATAATGAAGAACACTACGACGATAACGACGT
CCCCGTCAACAGAAAAACCAGCTTTGGTGGTCGTCTTAATCAATACTTCC
ACACAGCAAAACCCACATCATCAGCGCCACCAGCACTCCCATCCACGAAA
CAAATCACTACCAGCACTTCCTCTCCTCTCAAACGCAAACGAACCACACC
ACCAACAGCACTCATAACACGGATAACCCGCTCGCGCTCCCGCTCCTCCA
CCTCAACCCCAACCAGCACCACCACGACTACCTCCTCCCCACGCCCACGC
AAAACCCCCACACCCACACCCCCCACCTCCTCAGCAGCAGACTCCCTCCT
CGTCGACACCATCCCACCCAACCTAACCCTCCTCCTCGTGGGTGTAAACC
CGGGGGTTCTAACGGGCGTAACAGGCTACGCCTACGCACACCCGAGCAAC
CTCTTCTGGAAGCTCCTGCACTGGTCCGGGATCACACCCATCCGCCACCC
ACCCTCCGATACATACAAACTTCCCGAACTATATAACATCGGCAACACGA
ATATTGTGGAGCGTCCGACGCGGGACGCGAGTATGCTCAGCAAGAAGGAG
ATGGATGCAGGAGTACCGGTTCTGGAAGAGAAGGTGAGGGAGAAAAGACC
GGAAGTGGTGTGTCTTGTGGGCAAGAGTATCTGGGAGGCGGTTTGGAGGG
TTAAGGTTGGACGGGGGATTAGGAAGGAAGAGTTTAGGTATGGGTGGCAG
GATTTGGAGATGAATATGGGGAGAGTGGGTGGTGAAGGCGGGTGGGAGGG
GGCCAGGGTGTTTGTGGCTACGACTACTAGTGGGTTGGCGGCGGGGATGT
CGTTGCAGGAGAAGAGGGAGGTTTGGGATGAGTTGGGGAGGTGGGTTTGT
GAGAGGAGGAAAGTATGGGAGAGGGAAAGGGAGAAGGTGGAAGTTGGTGG
TGATGATACTAAAGTAGAATAGACCAAATCGGCGGTGCGATCGAAGGCTT
CATCTGGCCGAAGGTGTTCTGGGATTTTATGACGGACAATTTGAATGGCG
CTGTGAACCCGGTCCCTGTGCTACAAATTCTCAACCTCCTTTTGGGCCTA
CTCGGCCTTGCATGGGAATGGCCTTTGAAATATGTTGCCGGCTCCCTCGC
GCACCGCAGCATCGAGTTCCGATTGATCTTCTATCCCCTCAGCGCTCTAC
TCTCCATGCTCCTCTACCAGGGCACGGACCCTGCTCTGTACTACCTTATT
GGAATCGGGGTGTATTTCTGGGCCTACAGCGAGGGCGAGGTATATGGGAA
GGCTCATCAAAAATCACTGGGCGCGACTTATTATTCTCACAGCCTCAGCT
TACAGTCCTCGCGAGGACATCGACGCGATCCAAATACCCTCTACAACCCC
CAGTCACGACAATGAAGCTCATAATGAAGAACACTACGACGATAACGACG
TCCCCGTCAACAGAAAAACCAGCTTTGGTGGTCGTCTTAATCAATACTTC
CACACAGCAAAACCCACATCATCAGCGCCACCAGCACTCCCATCCACGAA
ACAAATCACTACCAGCACTTCCTCTCCTCTCAAACGCAAACGAACCACAC
CACCAACAGCACTCATAACACGGATAACCCGCTCGCGCTCCCGCTCCTCC
ACCTCAACCCCAACCAGCACCACCACGACTACCTCCTCCCCACGCCCACG
CAAAACCCCCACACCCACACCCCCCACCTCCTCAGCAGCAGACTCCCTCC
TCGTCGACACCATCCCACCCAACCTAACCCTCCTCCTCGTGGGTGTAAAC
CCGGGGGTTCTAACGGGCGTAACAGGCTACGCCTACGCACACCCGAGCAA
CCTCTTCTGGAAGCTCCTGCACTGGTCCGGGATCACACCCATCCGCCACC
CACCCTCCGATACATACAAACTTCCCGAACTATATAACATCGGCAACACG
AATATTGTGGAGCGTCCGACGCGGGACGCGAGTATGCTCAGCAAGAAGGA
GATGGATGCAGGAGTACCGGTTCTGGAAGAGAAGGTGAGGGAGAAAAGAC
CGGAAGTGGTGTGTCTTGTGGGCAAGAGTATCTGGGAGGCGGTTTGGAGG
GTTAAGGTTGGACGGGGGATTAGGAAGGAAGAGTTTAGGTATGGGTGGCA
GGATTTGGAGATGAATATGGGGAGAGTGGGTGGTGAAGGCGGGTGGGAGG
GGGCCAGGGTGTTTGTGGCTACGACTACTAGTGGGTTGGCGGCGGGGATG
TCGTTGCAGGAGAAGAGGGAGGTTTGGGATGAGTTGGGGAGGTGGGTTTG
TGAGAGGAGGAAAGTATGGGAGAGGGAAAGGGAGAAGGTGGAAGTTGGTG
GTGATGATACTAAAGTAGAATAGACCAAATCGGCGGTGCGATCGAAGGCT
TCATCTGGCCGAAGGTGTTCTGGGATTTTATGACGGACAATTTGAATGGC
GCTGTGAACCCGGTCCCTGTGCTACAAATTCTCAACCTCCTTTTGGGCCT
ACTCGGCCTTGCATGGGAATGGCCTTTGAAATATGTTGCCGGCTCCCTCG
CGCACCGCAGCATCGAGTTCCGATTGATCTTCTATCCCCTCAGCGCTCTA
CTCTCCATGCTCCTCTACCAGGGCACGGACCCTGCTCTGTACTACCTTAT
TGGAATCGGGGTGTATTTCTGGGCCTACAGCGAGGGCGAGGTATATGGGA
AGGCTCATCAAAAATCACTGGGCGCGACTTATTATTCTCACAGCCTCAGC
TTACAGTCCTCGCGAGGACATCGACGCGATCCAAATACCCTCTACAACCC
CCAGTCACGACAATGAAGCTCATAATGAAGAACACTACGACGATAACGAC
GTCCCCGTCAACAGAAAAACCAGCTTTGGTGGTCGTCTTAATCAATACTT
CCACACAGCAAAACCCACATCATCAGCGCCACCAGCACTCCCATCCACGA
AACAAATCACTACCAGCACTTCCTCTCCTCTCAAACGCAAACGAACCACA
CCACCAACAGCACTCATAACACGGATAACCCGCTCGCGCTCCCGCTCCTC
CACCTCAACCCCAACCAGCACCACCACGACTACCTCCTCCCCACGCCCAC
GCAAAACCCCCACACCCACACCCCCCACCTCCTCAGCAGCAGACTCCCTC
CTCGTCGACACCATCCCACCCAACCTAACCCTCCTCCTCGTGGGTGTAAA
CCCGGGGGTTCTAACGGGCGTAACAGGCTACGCCTACGCACACCCGAGCA
ACCTCTTCTGGAAGCTCCTGCACTGGTCCGGGATCACACCCATCCGCCAC
CCACCCTCCGATACATACAAACTTCCCGAACTATATAACATCGGCAACAC
GAATATTGTGGAGCGTCCGACGCGGGACGCGAGTATGCTCAGCAAGAAGG
AGATGGATGCAGGAGTACCGGTTCTGGAAGAGAAGGTGAGGGAGAAAAGA
CCGGAAGTGGTGTGTCTTGTGGGCAAGAGTATCTGGGAGGCGGTTTGGAG
GGTTAAGGTTGGACGGGGGATTAGGAAGGAAGAGTTTAGGTATGGGTGGC
AGGATTTGGAGATGAATATGGGGAGAGTGGGTGGTGAAGGCGGGTGGGAG
GGGGCCAGGGTGTTTGTGGCTACGACTACTAGTGGGTTGGCGGCGGGGAT
GTCGTTGCAGGAGAAGAGGGAGGTTTGGGATGAGTTGGGGAGGTGGGTTT
GTGAGAGGAGGAAAGTATGGGAGAGGGAAAGGGAGAAGGTGGAAGTTGGT
GGTGATGATACTAAAGTAGAATAGACCAAATCGGCGGTGCGATCGAAGGC
TTCATCTGGCCGAAGGTGTTCTGGGATTTTATGACGGACAATTTGAATGG
CGCTGTGAACCCGGTCCCTGTGCTACAAATTCTCAACCTCCTTTTGGGCC
TACTCGGCCTTGCATGGGAATGGCCTTTGAAATATGTTGCCGGCTCCCTC
GCGCACCGCAGCATCGAGTTCCGATTGATCTTCTATCCCCTCAGCGCTCT
ACTCTCCATGCTCCTCTACCAGGGCACGGACCCTGCTCTGTACTACCTTA
TTGGAATCGGGGTGTATTTCTGGGCCTACAGCGAGGGCGAGGTATATGGG
AAGGCTCATCAAAAATCACTGGGCGCGACTTATTATTCTCACAGCCTCAG
CTT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0019104DNA N-glycosylase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_316278M747DRAFT_316278Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_316278-T1M747DRAFT_316278-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_316278-T1.cdsM747DRAFT_316278-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_316278-T1.exon3M747DRAFT_316278-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_316278-T1.exon2M747DRAFT_316278-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_316278-T1.exon1M747DRAFT_316278-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
DBxrefInterPro:IPR015637
DBxrefInterPro:IPR036895
DBxrefInterPro:IPR005122
DBxrefPFAM:PF03167
ProductDNA glycosylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851923.1supercontigKZ851923.1:11396..13699 -
Powered by Drupal