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M747DRAFT_319550-T1, M747DRAFT_319550-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_319550-T1
Unique NameM747DRAFT_319550-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851967.1:53786..54915+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_319550-T1 ID=M747DRAFT_319550-T1|Name=M747DRAFT_319550-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1130bp|location=Sequence derived from alignment at KZ851967.1:53786..54915+ (Aspergillus niger ATCC 13496)
ATGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCCGGAGGTTGA
CAGCTATGTCATGGTCAATGTGAAGCAGGTATGCATTGCTACAGGTCATG
TGGTTCTTTCAGGGTTCGAAAACATCCTCTAATACTTGTCTTTTCACCCC
TCACAGATCGCCGAAATGGGCGCATACGTTAAGCTCCTCGAGTATGACAA
CATCGACGGCATGATTCTGCTCTCCGAATTGTCGCGCAGACGTATCCGTA
GTATCCAGAAGCTTATTCGTATCGGCCGTAACGAGGTCGTCATCGTGCTT
CGTGTGGACAAGGAGAAGGGCAAGTCGGAGTCCTCTGGATGACAATATCA
GCGTCAATTTACTGACTCTTTTTTCTCTACGTCTTTAGGTTACATTGATC
TTTCCAAGCGTCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGAGGAAAGA
TACAACAAGAGCAAGGCAGTCCACTCCATCATGCGCCACGTTGCCGAGGC
CACTCAGACTCCTCTTGAGACCCTATACCAGCAGATCGGATGGCCTTTGA
ACCGCAAATACGGACACTCCCACGATGCGTTCAAGATCTCCATCACGTAA
GGAAACCTCTCGACTCAAGGCTATCGCGGACCGAGTACTCATAACATCAC
AGGAACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGAA
GAAGGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACCCGACCA
AGGTCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGTATCGAT
GCCGTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAAAC
CCAGATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAGCC
AGTGCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTCAA
AGGATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGAT
GGCTCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCTCA
TGGAGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCATG
TCCGAGAGCGATGAGGGCGTTCCCGAGTAA
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Coding sequence (CDS) from alignment at KZ851967.1:53786..54915+

>M747DRAFT_319550-T1 ID=M747DRAFT_319550-T1|Name=M747DRAFT_319550-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3708bp|location=Sequence derived from alignment at KZ851967.1:53786..54915+ (Aspergillus niger ATCC 13496)
ATGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCCGGAGGTTGA
CAGCTATGTCATGGTCAATGTGAAGCAGATCGCCGAAATGGGCGCATACG
TTAAGCTCCTCGAGTATGACAACATCGACGGCATGATTCTGCTCTCCGAA
TTGTCGCGCAGACGTATCCGTAGTATCCAGAAGCTTATTCGTATCGGCCG
TAACGAGGTCGTCATCGTGCTTCGTGTGGACAAGGAGAAGGGTTACATTG
ATCTTTCCAAGCGTCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGAGGAA
AGATACAACAAGAGCAAGGCAGTCCACTCCATCATGCGCCACGTTGCCGA
GGCCACTCAGACTCCTCTTGAGACCCTATACCAGCAGATCGGATGGCCTT
TGAACCGCAAATACGGACACTCCCACGATGCGTTCAAGATCTCCATCACG
AACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGAAGAA
GGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACCCGACCAAGG
TCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGTATCGATGCC
GTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAAACCCA
GATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAGCCAGT
GCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTCAAAGG
ATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGATGGC
TCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCTCATGG
AGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCATGTCC
GAGAGCGATGAGGGCGTTCCCGAGTAAATGTCGTTGACAAATTGCCGTTT
CTACGAGGAGAAGTATCCGGAGGTTGACAGCTATGTCATGGTCAATGTGA
AGCAGATCGCCGAAATGGGCGCATACGTTAAGCTCCTCGAGTATGACAAC
ATCGACGGCATGATTCTGCTCTCCGAATTGTCGCGCAGACGTATCCGTAG
TATCCAGAAGCTTATTCGTATCGGCCGTAACGAGGTCGTCATCGTGCTTC
GTGTGGACAAGGAGAAGGGTTACATTGATCTTTCCAAGCGTCGAGTTTCT
CCCGAAGATGTTGTCAAGTGCGAGGAAAGATACAACAAGAGCAAGGCAGT
CCACTCCATCATGCGCCACGTTGCCGAGGCCACTCAGACTCCTCTTGAGA
CCCTATACCAGCAGATCGGATGGCCTTTGAACCGCAAATACGGACACTCC
CACGATGCGTTCAAGATCTCCATCACGAACCCCGACGTGTGGAACGAGGT
TGAATTCCCTAGCGAGTCCGTGAAGAAGGAGTTGACGCACTACATCAGCA
AGAGACTTACTCCTCACCCGACCAAGGTCCGTGCCGATATTGAGGTTACC
TGCTTCGGTTACGACGGTATCGATGCCGTCAAGGATGCCCTGCGCACCGC
CGAGGCCAACAACACCCCTGAAACCCAGATCAAGGTTAAGCTGGTTGCCC
CGCCACTCTACGTCTTGACCAGCCAGTGCTTGGACAAGGCTATTGGTATT
CAGATGCTCGAGGAGGCCATTCAAAGGATCGAGGCCAGGATCAAGGAGTC
TGGCGGTGGCTGCATCGTTAAGATGGCTCCCAAGGCTGTTACTGAGCACG
ATGATGCTGCTCTTCAGGAGCTCATGGAGAAGCGTGAGCGTGAGAACATG
GAAGTCAGCGGCGACGAGAGCATGTCCGAGAGCGATGAGGGCGTTCCCGA
GTAAATGTCGTTGACAAATTGCCGTTTCTACGAGGAGAAGTATCCGGAGG
TTGACAGCTATGTCATGGTCAATGTGAAGCAGATCGCCGAAATGGGCGCA
TACGTTAAGCTCCTCGAGTATGACAACATCGACGGCATGATTCTGCTCTC
CGAATTGTCGCGCAGACGTATCCGTAGTATCCAGAAGCTTATTCGTATCG
GCCGTAACGAGGTCGTCATCGTGCTTCGTGTGGACAAGGAGAAGGGTTAC
ATTGATCTTTCCAAGCGTCGAGTTTCTCCCGAAGATGTTGTCAAGTGCGA
GGAAAGATACAACAAGAGCAAGGCAGTCCACTCCATCATGCGCCACGTTG
CCGAGGCCACTCAGACTCCTCTTGAGACCCTATACCAGCAGATCGGATGG
CCTTTGAACCGCAAATACGGACACTCCCACGATGCGTTCAAGATCTCCAT
CACGAACCCCGACGTGTGGAACGAGGTTGAATTCCCTAGCGAGTCCGTGA
AGAAGGAGTTGACGCACTACATCAGCAAGAGACTTACTCCTCACCCGACC
AAGGTCCGTGCCGATATTGAGGTTACCTGCTTCGGTTACGACGGTATCGA
TGCCGTCAAGGATGCCCTGCGCACCGCCGAGGCCAACAACACCCCTGAAA
CCCAGATCAAGGTTAAGCTGGTTGCCCCGCCACTCTACGTCTTGACCAGC
CAGTGCTTGGACAAGGCTATTGGTATTCAGATGCTCGAGGAGGCCATTCA
AAGGATCGAGGCCAGGATCAAGGAGTCTGGCGGTGGCTGCATCGTTAAGA
TGGCTCCCAAGGCTGTTACTGAGCACGATGATGCTGCTCTTCAGGAGCTC
ATGGAGAAGCGTGAGCGTGAGAACATGGAAGTCAGCGGCGACGAGAGCAT
GTCCGAGAGCGATGAGGGCGTTCCCGAGTAAATGTCGTTGACAAATTGCC
GTTTCTACGAGGAGAAGTATCCGGAGGTTGACAGCTATGTCATGGTCAAT
GTGAAGCAGATCGCCGAAATGGGCGCATACGTTAAGCTCCTCGAGTATGA
CAACATCGACGGCATGATTCTGCTCTCCGAATTGTCGCGCAGACGTATCC
GTAGTATCCAGAAGCTTATTCGTATCGGCCGTAACGAGGTCGTCATCGTG
CTTCGTGTGGACAAGGAGAAGGGTTACATTGATCTTTCCAAGCGTCGAGT
TTCTCCCGAAGATGTTGTCAAGTGCGAGGAAAGATACAACAAGAGCAAGG
CAGTCCACTCCATCATGCGCCACGTTGCCGAGGCCACTCAGACTCCTCTT
GAGACCCTATACCAGCAGATCGGATGGCCTTTGAACCGCAAATACGGACA
CTCCCACGATGCGTTCAAGATCTCCATCACGAACCCCGACGTGTGGAACG
AGGTTGAATTCCCTAGCGAGTCCGTGAAGAAGGAGTTGACGCACTACATC
AGCAAGAGACTTACTCCTCACCCGACCAAGGTCCGTGCCGATATTGAGGT
TACCTGCTTCGGTTACGACGGTATCGATGCCGTCAAGGATGCCCTGCGCA
CCGCCGAGGCCAACAACACCCCTGAAACCCAGATCAAGGTTAAGCTGGTT
GCCCCGCCACTCTACGTCTTGACCAGCCAGTGCTTGGACAAGGCTATTGG
TATTCAGATGCTCGAGGAGGCCATTCAAAGGATCGAGGCCAGGATCAAGG
AGTCTGGCGGTGGCTGCATCGTTAAGATGGCTCCCAAGGCTGTTACTGAG
CACGATGATGCTGCTCTTCAGGAGCTCATGGAGAAGCGTGAGCGTGAGAA
CATGGAAGTCAGCGGCGACGAGAGCATGTCCGAGAGCGATGAGGGCGTTC
CCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003743translation initiation factor activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_319550M747DRAFT_319550Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_319550-T1.exon1M747DRAFT_319550-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_319550-T1.exon2M747DRAFT_319550-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_319550-T1.exon3M747DRAFT_319550-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_319550-T1.exon4M747DRAFT_319550-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_319550-T1.cdsM747DRAFT_319550-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_319550-T1M747DRAFT_319550-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519671.1
NoteBUSCO:EOG09263CAH
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR024055
DBxrefInterPro:IPR003029
DBxrefInterPro:IPR011488
DBxrefInterPro:IPR024054
DBxrefInterPro:IPR022967
DBxrefPFAM:PF00575
DBxrefPFAM:PF07541
Productputative eukaryotic translation initiation factor 2 alpha subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851967.1supercontigKZ851967.1:53786..54915 +
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