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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851899.1:1468524..1471649+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_320249-T1 ID=M747DRAFT_320249-T1|Name=M747DRAFT_320249-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=3126bp|location=Sequence derived from alignment at KZ851899.1:1468524..1471649+ (Aspergillus niger ATCC 13496)
CTCACAACGGATTTTCCTGCCAGGCAAAAGAACCAGCCCGATCCGCCCTA
CCACCTGCGTGTTATCCCCCCGGCGACGACTGAGACCGCCGTTCTTCGAT
TCCCGCGACTTTCCCGATCTCGAGCGTCTGAATAATATCCGCAAACATGT
CGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCCAGCTCCTCTGAG
GAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGTCCGAGGAGGA
GTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCTTCCGAGGACG
AGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAATGTTTCCGAA
AGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGTCAAGAGTGCCAA
GGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGTTGATTGAAAATG
CCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGGTGCGTTTGGCCCT
GGAATCAAAGAATGGAATTGCGGGACCGGCAGCGGAGGGAAGGATGGGTT
TTTGATACTAACATCCGTTTTATAGAGTTTGACAAGCTGAACCGTCAAAT
CGTCAAGATTGTCCAGTCTGGCCCGACCCCGAAGATCTACGTCAAGACCG
TTGCGGACCTGGAGGATTTCGTCAACGAGACCATCTCGAAGCAGAAGTCG
AGCAACAAGAAGATGAACGCCAGCAACGCCAAGGGATTCAACGCCGTTAA
GCAGCGTATCAAGAAGAACAACAAGGACTACGCCGTTCAGATCGACAAGT
ACAGGAAGGACAAGGATGGCTTCATGGAAGCCAAGGAGGAAGTGGCCCGT
CCCGTCGCCGCCGCCCCTCGCCTGACCAAGATTGAGCGTATCGAAGCCCC
TGCTCTTTCCACCGCCGGTGATGACGATGGTTTTGCGACCGTTGGCCGTG
GCGGCAAGACCCTCCAGTACACCCCCGAGAGCATCCTGAAGCACCTCCGC
GTTATCGTCGAATCCCGCGGAAAGAAGAACACCGACCGTTTGGAGCAGAT
CCGCACGATGGAGAAGCTGTTGGAGGTTGCCCAGACTCCTTACCAGCGTA
TCCGCATCTACTTGACCATGATCTCCACCCGCTTCGATCTCATCTCTTCC
TCTACCAGCAACTACATGGCCGTCGATCAGTGGAAGTTCGCCGAGCAGGA
GTTCGCTACCCTTCTGTCCGTTCTCGAGAACAACCGCACCTATGTCGTGA
CCGAGGGTGCCGAAGAGTGGGAGGATGATGAGAAGCAGCCCACACCCGCC
CCCGGCGAGGTCGTTCACATCCCCGGCAGCATTGTCTCGTATGTCGAGAG
ACTGGATGATGAGCTCACCCGTTCCCTGCAGCACATTGACCCCCACACTG
CCGAGTACATCGACCGTCTGGGTGATGAGAAGCAGCTGTACGCCAACCTT
GTGCGCACCCAGGTCTACGTCGAGGGTCTTACTCAGTCCGAGAAGACCGA
TCCCCGTCAGGACAGCCTTAACCGCGTGGTCATGAGGAGACTGGAGCACA
TCTACTTCAAGCCCTCTCAGGTCGTCACGATCCTGGAGGAAGGTACCTGG
AAGGTCCTTCCCTCCGAATTGGAATCCAACGTCACTCCCCGTGGCAACAC
GGGAGATGTGACCAACCTTGTGCAGACCCTTTGCAGCTACCTGTTCAAGC
ACAGCGACGGTATCATCCGTGCTCGTGCGATGCTGTGCCAGATCTACTTC
CTTGCTCTGCACGACCAGTACTACCGCTCTCGTGACCTGATGCTCATGTC
CCACCTTACCGAGAACATCGCCAACTTCGACGTTTCCACCCAGATCCTCT
TCAACCGCACCCTTGTTCAGATCGGTCTGTGTGCCTTCCGGGCCGGCCTG
ATCTACGAGGCTCAGACCACCCTCTCTGAGGTCTGCGGCAGTGGACGTCA
GAAAGAGCTGTTGGCTCAGGGCATCATCCTCCAGCGCTACTCCACCGTCT
CGCCGGAACAGGAGCGTCTGGAGCGTCAGCGTCAGCTGCCCTTCCACATG
CACATCAACCTGGAGCTTCTCGAGTGCATCTACCTGACGTCGAGCATGTT
CCTGGAGGTCCCTCTGATGGCTCAGACTTCTTCCTCCCCCGAGATGAAGC
GTCGTGTCATCTCCAAGACCTTCCGTCGTATGCTGGACTACAACGAGCGC
CAGGTCTTCACTGGTCCTGCTGAGAACACCCGTGACGGTGTCATCATGAG
TGCCAAGTTCCTCGCCGCCGGAGACTGGAAGAAGGCCGCTGAGATGCTCA
ACTCGATCAAGATCTGGGATCTGATGCCCCAGCCCGACAAGGTCAAGGAG
ATGCTGTCCCAGCAGATCCAGGAGGAGGGTCTCCGCACCTACCTCTTCAC
CTACGCCCCCTTCTACGACAGCCTCTCCATCTCCACCCTGGCTACCATGT
TCGAGCTCCCCGAGAAGAAGATCGCCGCTATCATCAGCCGTATGATCTCT
CACGAGGAATTGGCCGCTGCTCTCGACCAGGTCAACGATGCCATTGTCTT
CCGCAAGGGTGTCGAGTTGTCGCGTCTCCAGTCCCAGATCGTCACCCTCG
CCGACAAGTCGATGAACCTTCTGGAGTCCAACGAAAAGACTCTCGAGCAG
CGTACGCAAGGCATGGCCAACGCCTTCCAGCGCGATCAGGGCGCCGGCGC
CCGTGGTGGCCGTGGTCCTCGAGGTGGTGGCCAAGCCCGTGGTGGTCCCA
GATTCCCTGGTGGCCAACAAGGTCGTCGGCCTGGTGGACAGCAGTTTAGC
GGTGGTGCATTGGGCGGGGCGATCAAGGCATAAAAATGATTTCTAATGGC
ATTGATTTCTTTTCATGGTTCTAATGCTCCCTTTTCTTGGAATTTAACTG
CGTATGATTCCATGTGTGCTCTTACCCATCATGGTTCCTTTTTTCTTTTC
CCTTTTTTCTTCCGTTGGGCCACTCTAGCCCTTTCTTCTTAGAGTTCTCC
TACTGTCATGCATACCGTATTTTTACTCTCCGCAGATGAATATCACGTTT
GGAATGAACGATGGACATAAAGAGCCTGAAAAGTCTAGATTGTATATGGA
AGGATGAAAATCAATGCACGCTAACG back to topCoding sequence (CDS) from alignment at KZ851899.1:1468524..1471649+ >M747DRAFT_320249-T1 ID=M747DRAFT_320249-T1|Name=M747DRAFT_320249-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5196bp|location=Sequence derived from alignment at KZ851899.1:1468524..1471649+ (Aspergillus niger ATCC 13496)
ATGTCGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCCAGCTCCTC
TGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGTCCGAGG
AGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCTTCCGAG
GACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAATGTTTC
CGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGTCAAGAGTG
CCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGTTGATTGAA
AATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGAGTTTGACAA
GCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCGACCCCGAAGA
TCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAACGAGACCATC
TCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCAACGCCAAGGG
ATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAGGACTACGCCG
TTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCATGGAAGCCAAG
GAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGACCAAGATTGA
GCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGACGATGGTTTTG
CGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCCCGAGAGCATC
CTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGAAGAACACCGA
CCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAGGTTGCCCAGA
CTCCTTACCAGCGTATCCGCATCTACTTGACCATGATCTCCACCCGCTTC
GATCTCATCTCTTCCTCTACCAGCAACTACATGGCCGTCGATCAGTGGAA
GTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTCGAGAACAACC
GCACCTATGTCGTGACCGAGGGTGCCGAAGAGTGGGAGGATGATGAGAAG
CAGCCCACACCCGCCCCCGGCGAGGTCGTTCACATCCCCGGCAGCATTGT
CTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCCCTGCAGCACA
TTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGATGAGAAGCAG
CTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGGGTCTTACTCA
GTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGCGTGGTCATGA
GGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGTCACGATCCTG
GAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAATCCAACGTCAC
TCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAGACCCTTTGCA
GCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCGTGCGATGCTG
TGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACCGCTCTCGTGA
CCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAACTTCGACGTTT
CCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGGTCTGTGTGCC
TTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCTCTGAGGTCTG
CGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATCATCCTCCAGC
GCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCGTCAGCGTCAG
CTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGTGCATCTACCT
GACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAGACTTCTTCCT
CCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCGTCGTATGCTG
GACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGAACACCCGTGA
CGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGACTGGAAGAAGG
CCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGATGCCCCAGCCC
GACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGGAGGGTCTCCG
CACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTCTCCATCTCCA
CCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGCCGCTATCATC
AGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCGACCAGGTCAA
CGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGTCTCCAGTCCC
AGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGAGTCCAACGAA
AAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCTTCCAGCGCGA
TCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGTGGTGGCCAAG
CCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCGTCGGCCTGGT
GGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCAAGGCATAAAT
GTCGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCCAGCTCCTCTG
AGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGTCCGAGGAG
GAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCTTCCGAGGA
CGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAATGTTTCCG
AAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGTCAAGAGTGCC
AAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGTTGATTGAAAA
TGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGAGTTTGACAAGC
TGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCGACCCCGAAGATC
TACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAACGAGACCATCTC
GAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCAACGCCAAGGGAT
TCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAGGACTACGCCGTT
CAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCATGGAAGCCAAGGA
GGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGACCAAGATTGAGC
GTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGACGATGGTTTTGCG
ACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCCCGAGAGCATCCT
GAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGAAGAACACCGACC
GTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAGGTTGCCCAGACT
CCTTACCAGCGTATCCGCATCTACTTGACCATGATCTCCACCCGCTTCGA
TCTCATCTCTTCCTCTACCAGCAACTACATGGCCGTCGATCAGTGGAAGT
TCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTCGAGAACAACCGC
ACCTATGTCGTGACCGAGGGTGCCGAAGAGTGGGAGGATGATGAGAAGCA
GCCCACACCCGCCCCCGGCGAGGTCGTTCACATCCCCGGCAGCATTGTCT
CGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCCCTGCAGCACATT
GACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGATGAGAAGCAGCT
GTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGGGTCTTACTCAGT
CCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGCGTGGTCATGAGG
AGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGTCACGATCCTGGA
GGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAATCCAACGTCACTC
CCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAGACCCTTTGCAGC
TACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCGTGCGATGCTGTG
CCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACCGCTCTCGTGACC
TGATGCTCATGTCCCACCTTACCGAGAACATCGCCAACTTCGACGTTTCC
ACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGGTCTGTGTGCCTT
CCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCTCTGAGGTCTGCG
GCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATCATCCTCCAGCGC
TACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCGTCAGCGTCAGCT
GCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGTGCATCTACCTGA
CGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAGACTTCTTCCTCC
CCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCGTCGTATGCTGGA
CTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGAACACCCGTGACG
GTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGACTGGAAGAAGGCC
GCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGATGCCCCAGCCCGA
CAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGGAGGGTCTCCGCA
CCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTCTCCATCTCCACC
CTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGCCGCTATCATCAG
CCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCGACCAGGTCAACG
ATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGTCTCCAGTCCCAG
ATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGAGTCCAACGAAAA
GACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCTTCCAGCGCGATC
AGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGTGGTGGCCAAGCC
CGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCGTCGGCCTGGTGG
ACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCAAGGCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005852 | eukaryotic translation initiation factor 3 complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006413 | translational initiation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003743 | translation initiation factor activity |
| GO:0031369 | translation initiation factor binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092616QN |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR027516 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR008905 |
| DBxref | InterPro:IPR000717 |
| DBxref | PFAM:PF01399 |
| Product | Translation initiation factor 3 subunit c |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851899.1 | supercontig | KZ851899.1:1468524..1471649 + |
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