M747DRAFT_321998-T1, M747DRAFT_321998-T1 (mRNA) Aspergillus niger ATCC 13496

Overview


Name	M747DRAFT_321998-T1
Unique Name	M747DRAFT_321998-T1
Type	mRNA
Organism	Aspergillus niger ATCC 13496

Sequences

The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:386095..388291+
coding sequence from alignment at KZ851907.1:386095..388291+

mRNA from alignment at KZ851907.1:386095..388291+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>M747DRAFT_321998-T1 ID=M747DRAFT_321998-T1|Name=M747DRAFT_321998-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2197bp|location=Sequence derived from alignment at KZ851907.1:386095..388291+ (Aspergillus niger ATCC 13496)
CTCGCCGTTCACTCCAACATCATTGTTCACTCGCCTCCGTACCCCAGTTT
CGCCAATACAGCATATCTACTTATCAGCAGCATGTTGGAAGCATTCGAGA
TCTTGACTGCCTCAGGGGTAGTCCTGTGGTCGAAATCGTACGCGCCCGTC
GGGGCGCATATTGTTAACAGCCTTATCAATGATGTCTTCATCGAGGAGAA
GGTCCAGCTTCAGGCAACGAACAATGCTGCCCCTTCGTTCAAGAAAGAGA
AGTACACTCTAAAGTGGAAAAGAGTGAAGGAATTCGACTTGATCTTTGTG
GTATGCTGTTGTCTCCGACCGCGTCTCAGCTCTTCTGTCTCTGACCGCAA
ATCGCTCTAGGCCGTCTATCAGTCTCTCTTACAGCTTGGTTGGATCGACA
AACTCCTGGACAACATTTCCACCCTGTACATCGATTTGTACAAGGATCAA
TTACGAAGTACTCGCGCAAGGATAGCACAGTACCCCTTTGACAAATACTT
TGACCAGCAAGTTCGGGAGCTTGAGGATAAGTCGGGGCCTATCTCTTCGG
AGGCATTCGTGGCTCATGCGGTCGATAAGAAAGACCCGCTGGTATCGTCT
GACAATGGCGGCCCCCCTCCGCCACCTGTGCCTGGTCTTCTCAAAGGTAT
GCATCTAAATGGGCCTTATAAAATGTAACGATACTAACATTCCTAAAGCG
CAGCATCAAGCTGCGCTAGCCGGGGCGACCTCTGATGAGAGTACGCCACC
GCACACCCCGGATACATCGCGGTCATCCACCCCTGTTGCGAACCACATCA
TAACTGCCAAGGGGGGGCCAGCTGGCCGAGTTTCACGTCGTGCACGCAAG
GCCGCTAACGCCAGCGCCAATGCTTCCTCAGGCGACGAAAACCGCAAAGG
AAAGACACCCAAGAGCGGAAAAAAGATGCGCAAGTGGGATGCCGATGGAT
TTGCCGATGAAGATGATGGTCAGATCCTCGACTACTCAGCCCATGCTGAC
GGTGAAGAAGCCGCTGCTCCAGCTGTGGAAGGCGTGTCGCAAGATTCTTG
GGGACGCAGAACTGGCAAGGGCCAGTTCGTACTGAAAGATTTGGGAGACG
AAGTTCACTCGATTTTGGAAAATGCAGAAAGCGACAAAGCAAAGGATGTG
TCCTCTGCTGGTTTCGTCGGTTCAGGTTTCAATGCCATTGGAGGTCTTCT
ACGTAATATCGTGGGCGGGAAGACCCTTACCGAAGCAGATTTGGAGAAGC
CCTTGAAGACCATGGAAGATCATTTGTTGAGGAAGAACGTTGCACGCGAG
GCCGCGGTCCGGCTGTGTGAGGGTGTCCAGCGGGAGCTCGTGGGGAAAAA
AACAGGCAATTTCCAAAGTGTGGATGCTGCTTTGCGCTCGGCCATGGAGT
CATCTCTTCGGAAAATACTGACGCCTACCTCCTCTCTTGATCTGCTCCGT
GAAATCGATGCGGTTACGTCTCCCACTAGCAAGCAGCAATCTCCTCGTCC
TTATGTTATTTCGATCGTTGGTGTCAACGGCGTTGGAAAGTCGACGAACT
TGGGAAAGATTTGCTATTTTCTACTGCAGAACAAATACCGTGTTCTCATC
GCCGCATGCGATACTTTCCGATCTGGAGCTGTGGAACAGCTACGTGTTCA
TGCACGGAACCTCAGGGAACTCAGTGCCCGCGAGAACGTTGGCGAGGTTG
AGCTGTACGAGAAGGGTTACGGAAAGGATGCAGCAAACGTGGCGAAGGAT
GCTGTCGAATACGGAGCTGCCAACCACTTCGATGTCGTCCTTATCGATAC
TGCCGGCCGCCGACACAACGACCAGCGCCTCATGTCCTCGCTGGAGAAGT
TTGCTAAATTTGCTAATCCAGACAAGATCTTCATGGTTGGCGAAGCCTTG
GTTGGTACGGACAGTGTGATGCAGGCTCGCAATTTCAACCAGGCCTTCGG
TACTGGGCGGAACCTTGACGGCTTCATCATCAGCAAATGTGATACAGTTG
GTGACATGGTGGGGACGCTGGTCAGCATGGTGCATGCTACAGGTATTCCC
ATTGTCTTCTTGGGAGTTGGTCAGCATTATGGTGACCTGAGAGGACTCAG
TGTCCCTTGGGCTGTCAATTTGTTGATGAAGTGATTGGCGCGCAGCTTAC
ATTAATATACTTCCGGCGAGTAATGAATATGACTACGATGAAGAACC

Coding sequence (CDS) from alignment at KZ851907.1:386095..388291+

>M747DRAFT_321998-T1 ID=M747DRAFT_321998-T1|Name=M747DRAFT_321998-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5823bp|location=Sequence derived from alignment at KZ851907.1:386095..388291+ (Aspergillus niger ATCC 13496)
ATGTTGGAAGCATTCGAGATCTTGACTGCCTCAGGGGTAGTCCTGTGGTC
GAAATCGTACGCGCCCGTCGGGGCGCATATTGTTAACAGCCTTATCAATG
ATGTCTTCATCGAGGAGAAGGTCCAGCTTCAGGCAACGAACAATGCTGCC
CCTTCGTTCAAGAAAGAGAAGTACACTCTAAAGTGGAAAAGAGTGAAGGA
ATTCGACTTGATCTTTGTGGCCGTCTATCAGTCTCTCTTACAGCTTGGTT
GGATCGACAAACTCCTGGACAACATTTCCACCCTGTACATCGATTTGTAC
AAGGATCAATTACGAAGTACTCGCGCAAGGATAGCACAGTACCCCTTTGA
CAAATACTTTGACCAGCAAGTTCGGGAGCTTGAGGATAAGTCGGGGCCTA
TCTCTTCGGAGGCATTCGTGGCTCATGCGGTCGATAAGAAAGACCCGCTG
GTATCGTCTGACAATGGCGGCCCCCCTCCGCCACCTGTGCCTGGTCTTCT
CAAAGCGCAGCATCAAGCTGCGCTAGCCGGGGCGACCTCTGATGAGAGTA
CGCCACCGCACACCCCGGATACATCGCGGTCATCCACCCCTGTTGCGAAC
CACATCATAACTGCCAAGGGGGGGCCAGCTGGCCGAGTTTCACGTCGTGC
ACGCAAGGCCGCTAACGCCAGCGCCAATGCTTCCTCAGGCGACGAAAACC
GCAAAGGAAAGACACCCAAGAGCGGAAAAAAGATGCGCAAGTGGGATGCC
GATGGATTTGCCGATGAAGATGATGGTCAGATCCTCGACTACTCAGCCCA
TGCTGACGGTGAAGAAGCCGCTGCTCCAGCTGTGGAAGGCGTGTCGCAAG
ATTCTTGGGGACGCAGAACTGGCAAGGGCCAGTTCGTACTGAAAGATTTG
GGAGACGAAGTTCACTCGATTTTGGAAAATGCAGAAAGCGACAAAGCAAA
GGATGTGTCCTCTGCTGGTTTCGTCGGTTCAGGTTTCAATGCCATTGGAG
GTCTTCTACGTAATATCGTGGGCGGGAAGACCCTTACCGAAGCAGATTTG
GAGAAGCCCTTGAAGACCATGGAAGATCATTTGTTGAGGAAGAACGTTGC
ACGCGAGGCCGCGGTCCGGCTGTGTGAGGGTGTCCAGCGGGAGCTCGTGG
GGAAAAAAACAGGCAATTTCCAAAGTGTGGATGCTGCTTTGCGCTCGGCC
ATGGAGTCATCTCTTCGGAAAATACTGACGCCTACCTCCTCTCTTGATCT
GCTCCGTGAAATCGATGCGGTTACGTCTCCCACTAGCAAGCAGCAATCTC
CTCGTCCTTATGTTATTTCGATCGTTGGTGTCAACGGCGTTGGAAAGTCG
ACGAACTTGGGAAAGATTTGCTATTTTCTACTGCAGAACAAATACCGTGT
TCTCATCGCCGCATGCGATACTTTCCGATCTGGAGCTGTGGAACAGCTAC
GTGTTCATGCACGGAACCTCAGGGAACTCAGTGCCCGCGAGAACGTTGGC
GAGGTTGAGCTGTACGAGAAGGGTTACGGAAAGGATGCAGCAAACGTGGC
GAAGGATGCTGTCGAATACGGAGCTGCCAACCACTTCGATGTCGTCCTTA
TCGATACTGCCGGCCGCCGACACAACGACCAGCGCCTCATGTCCTCGCTG
GAGAAGTTTGCTAAATTTGCTAATCCAGACAAGATCTTCATGGTTGGCGA
AGCCTTGGTTGGTACGGACAGTGTGATGCAGGCTCGCAATTTCAACCAGG
CCTTCGGTACTGGGCGGAACCTTGACGGCTTCATCATCAGCAAATGTGAT
ACAGTTGGTGACATGGTGGGGACGCTGGTCAGCATGGTGCATGCTACAGG
TATTCCCATTGTCTTCTTGGGAGTTGGTCAGCATTATGGTGACCTGAGAG
GACTCAGTGTCCCTTGGGCTGTCAATTTGTTGATGAAGTGAATGTTGGAA
GCATTCGAGATCTTGACTGCCTCAGGGGTAGTCCTGTGGTCGAAATCGTA
CGCGCCCGTCGGGGCGCATATTGTTAACAGCCTTATCAATGATGTCTTCA
TCGAGGAGAAGGTCCAGCTTCAGGCAACGAACAATGCTGCCCCTTCGTTC
AAGAAAGAGAAGTACACTCTAAAGTGGAAAAGAGTGAAGGAATTCGACTT
GATCTTTGTGGCCGTCTATCAGTCTCTCTTACAGCTTGGTTGGATCGACA
AACTCCTGGACAACATTTCCACCCTGTACATCGATTTGTACAAGGATCAA
TTACGAAGTACTCGCGCAAGGATAGCACAGTACCCCTTTGACAAATACTT
TGACCAGCAAGTTCGGGAGCTTGAGGATAAGTCGGGGCCTATCTCTTCGG
AGGCATTCGTGGCTCATGCGGTCGATAAGAAAGACCCGCTGGTATCGTCT
GACAATGGCGGCCCCCCTCCGCCACCTGTGCCTGGTCTTCTCAAAGCGCA
GCATCAAGCTGCGCTAGCCGGGGCGACCTCTGATGAGAGTACGCCACCGC
ACACCCCGGATACATCGCGGTCATCCACCCCTGTTGCGAACCACATCATA
ACTGCCAAGGGGGGGCCAGCTGGCCGAGTTTCACGTCGTGCACGCAAGGC
CGCTAACGCCAGCGCCAATGCTTCCTCAGGCGACGAAAACCGCAAAGGAA
AGACACCCAAGAGCGGAAAAAAGATGCGCAAGTGGGATGCCGATGGATTT
GCCGATGAAGATGATGGTCAGATCCTCGACTACTCAGCCCATGCTGACGG
TGAAGAAGCCGCTGCTCCAGCTGTGGAAGGCGTGTCGCAAGATTCTTGGG
GACGCAGAACTGGCAAGGGCCAGTTCGTACTGAAAGATTTGGGAGACGAA
GTTCACTCGATTTTGGAAAATGCAGAAAGCGACAAAGCAAAGGATGTGTC
CTCTGCTGGTTTCGTCGGTTCAGGTTTCAATGCCATTGGAGGTCTTCTAC
GTAATATCGTGGGCGGGAAGACCCTTACCGAAGCAGATTTGGAGAAGCCC
TTGAAGACCATGGAAGATCATTTGTTGAGGAAGAACGTTGCACGCGAGGC
CGCGGTCCGGCTGTGTGAGGGTGTCCAGCGGGAGCTCGTGGGGAAAAAAA
CAGGCAATTTCCAAAGTGTGGATGCTGCTTTGCGCTCGGCCATGGAGTCA
TCTCTTCGGAAAATACTGACGCCTACCTCCTCTCTTGATCTGCTCCGTGA
AATCGATGCGGTTACGTCTCCCACTAGCAAGCAGCAATCTCCTCGTCCTT
ATGTTATTTCGATCGTTGGTGTCAACGGCGTTGGAAAGTCGACGAACTTG
GGAAAGATTTGCTATTTTCTACTGCAGAACAAATACCGTGTTCTCATCGC
CGCATGCGATACTTTCCGATCTGGAGCTGTGGAACAGCTACGTGTTCATG
CACGGAACCTCAGGGAACTCAGTGCCCGCGAGAACGTTGGCGAGGTTGAG
CTGTACGAGAAGGGTTACGGAAAGGATGCAGCAAACGTGGCGAAGGATGC
TGTCGAATACGGAGCTGCCAACCACTTCGATGTCGTCCTTATCGATACTG
CCGGCCGCCGACACAACGACCAGCGCCTCATGTCCTCGCTGGAGAAGTTT
GCTAAATTTGCTAATCCAGACAAGATCTTCATGGTTGGCGAAGCCTTGGT
TGGTACGGACAGTGTGATGCAGGCTCGCAATTTCAACCAGGCCTTCGGTA
CTGGGCGGAACCTTGACGGCTTCATCATCAGCAAATGTGATACAGTTGGT
GACATGGTGGGGACGCTGGTCAGCATGGTGCATGCTACAGGTATTCCCAT
TGTCTTCTTGGGAGTTGGTCAGCATTATGGTGACCTGAGAGGACTCAGTG
TCCCTTGGGCTGTCAATTTGTTGATGAAGTGAATGTTGGAAGCATTCGAG
ATCTTGACTGCCTCAGGGGTAGTCCTGTGGTCGAAATCGTACGCGCCCGT
CGGGGCGCATATTGTTAACAGCCTTATCAATGATGTCTTCATCGAGGAGA
AGGTCCAGCTTCAGGCAACGAACAATGCTGCCCCTTCGTTCAAGAAAGAG
AAGTACACTCTAAAGTGGAAAAGAGTGAAGGAATTCGACTTGATCTTTGT
GGCCGTCTATCAGTCTCTCTTACAGCTTGGTTGGATCGACAAACTCCTGG
ACAACATTTCCACCCTGTACATCGATTTGTACAAGGATCAATTACGAAGT
ACTCGCGCAAGGATAGCACAGTACCCCTTTGACAAATACTTTGACCAGCA
AGTTCGGGAGCTTGAGGATAAGTCGGGGCCTATCTCTTCGGAGGCATTCG
TGGCTCATGCGGTCGATAAGAAAGACCCGCTGGTATCGTCTGACAATGGC
GGCCCCCCTCCGCCACCTGTGCCTGGTCTTCTCAAAGCGCAGCATCAAGC
TGCGCTAGCCGGGGCGACCTCTGATGAGAGTACGCCACCGCACACCCCGG
ATACATCGCGGTCATCCACCCCTGTTGCGAACCACATCATAACTGCCAAG
GGGGGGCCAGCTGGCCGAGTTTCACGTCGTGCACGCAAGGCCGCTAACGC
CAGCGCCAATGCTTCCTCAGGCGACGAAAACCGCAAAGGAAAGACACCCA
AGAGCGGAAAAAAGATGCGCAAGTGGGATGCCGATGGATTTGCCGATGAA
GATGATGGTCAGATCCTCGACTACTCAGCCCATGCTGACGGTGAAGAAGC
CGCTGCTCCAGCTGTGGAAGGCGTGTCGCAAGATTCTTGGGGACGCAGAA
CTGGCAAGGGCCAGTTCGTACTGAAAGATTTGGGAGACGAAGTTCACTCG
ATTTTGGAAAATGCAGAAAGCGACAAAGCAAAGGATGTGTCCTCTGCTGG
TTTCGTCGGTTCAGGTTTCAATGCCATTGGAGGTCTTCTACGTAATATCG
TGGGCGGGAAGACCCTTACCGAAGCAGATTTGGAGAAGCCCTTGAAGACC
ATGGAAGATCATTTGTTGAGGAAGAACGTTGCACGCGAGGCCGCGGTCCG
GCTGTGTGAGGGTGTCCAGCGGGAGCTCGTGGGGAAAAAAACAGGCAATT
TCCAAAGTGTGGATGCTGCTTTGCGCTCGGCCATGGAGTCATCTCTTCGG
AAAATACTGACGCCTACCTCCTCTCTTGATCTGCTCCGTGAAATCGATGC
GGTTACGTCTCCCACTAGCAAGCAGCAATCTCCTCGTCCTTATGTTATTT
CGATCGTTGGTGTCAACGGCGTTGGAAAGTCGACGAACTTGGGAAAGATT
TGCTATTTTCTACTGCAGAACAAATACCGTGTTCTCATCGCCGCATGCGA
TACTTTCCGATCTGGAGCTGTGGAACAGCTACGTGTTCATGCACGGAACC
TCAGGGAACTCAGTGCCCGCGAGAACGTTGGCGAGGTTGAGCTGTACGAG
AAGGGTTACGGAAAGGATGCAGCAAACGTGGCGAAGGATGCTGTCGAATA
CGGAGCTGCCAACCACTTCGATGTCGTCCTTATCGATACTGCCGGCCGCC
GACACAACGACCAGCGCCTCATGTCCTCGCTGGAGAAGTTTGCTAAATTT
GCTAATCCAGACAAGATCTTCATGGTTGGCGAAGCCTTGGTTGGTACGGA
CAGTGTGATGCAGGCTCGCAATTTCAACCAGGCCTTCGGTACTGGGCGGA
ACCTTGACGGCTTCATCATCAGCAAATGTGATACAGTTGGTGACATGGTG
GGGACGCTGGTCAGCATGGTGCATGCTACAGGTATTCCCATTGTCTTCTT
GGGAGTTGGTCAGCATTATGGTGACCTGAGAGGACTCAGTGTCCCTTGGG
CTGTCAATTTGTTGATGAAGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005785	signal recognition particle receptor complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005047	signal recognition particle binding
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport
GO:0006614	SRP-dependent cotranslational protein targeting to membrane

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
M747DRAFT_321998	M747DRAFT_321998	Aspergillus niger ATCC 13496	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_321998-T1	M747DRAFT_321998-T1-protein	Aspergillus niger ATCC 13496	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_321998-T1.utr5p1	M747DRAFT_321998-T1.utr5p1	Aspergillus niger ATCC 13496	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_321998-T1.exon1	M747DRAFT_321998-T1.exon1	Aspergillus niger ATCC 13496	exon
M747DRAFT_321998-T1.exon2	M747DRAFT_321998-T1.exon2	Aspergillus niger ATCC 13496	exon
M747DRAFT_321998-T1.exon3	M747DRAFT_321998-T1.exon3	Aspergillus niger ATCC 13496	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_321998-T1.cds	M747DRAFT_321998-T1.cds	Aspergillus niger ATCC 13496	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_321998-T1.utr3p1	M747DRAFT_321998-T1.utr3p1	Aspergillus niger ATCC 13496	three_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR027417
DBxref	InterPro:IPR036225
DBxref	InterPro:IPR011012
DBxref	InterPro:IPR042101
DBxref	InterPro:IPR007222
DBxref	InterPro:IPR013822
DBxref	InterPro:IPR003593
DBxref	InterPro:IPR000897
DBxref	PFAM:PF02881
DBxref	PFAM:PF00448
DBxref	PFAM:PF04086
Product	signal sequence receptor alpha subunit

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger ATCC 13496 whole genome analysis	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KZ851907.1	supercontig	KZ851907.1:386095..388291 +

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M747DRAFT_321998-T1, M747DRAFT_321998-T1 (mRNA) Aspergillus niger ATCC 13496

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M747DRAFT_321998-T1, M747DRAFT_321998-T1 (mRNA) Aspergillus niger ATCC 13496