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M747DRAFT_32208-T1, M747DRAFT_32208-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_32208-T1
Unique NameM747DRAFT_32208-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851913.1:303311..304485-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_32208-T1 ID=M747DRAFT_32208-T1|Name=M747DRAFT_32208-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1175bp|location=Sequence derived from alignment at KZ851913.1:303311..304485- (Aspergillus niger ATCC 13496)
TCAAAATCCCCGTGTCCCCATCATCGTCCATCTACTTAGCTTGTTTAAAA
CGGAAAAGAAAACATGGAAAATGATTGGTAAAAAGAATTCTCACCCCTCA
TAGCCTACTTGTGGAACAAGTAGATCCTCACCCATTAAACAGAGAACAAC
CCCGACGTCATGAACCAACTAGCAGCAAAGCTAGGCCTATCTCCGGAGCT
CCAATTCTACGACGTCTATTCCCTAGATGACCCATCACAGCTTACACACA
TCCCCCGACCTGCTCTGGCACTCTTAGTCATTATCCCACTTACACCAGCC
TGGGACCAAAGCCGCAAGGCCGAAGACGCTAACAAAGAAGAACCCTACCC
TGGCTCCGGCCGTCCTGACGAGCCAGTCATCTGGTTCAAGCAGACCATCG
GCCATGCTTGCGGATCGATCGGGCTATTACATAGTGTGATCAACGGTCCG
GCTGTCGACTTCATCACACCTGGGTCCGATCTTGAGACGATACGGAACCT
CGCCATACCGCTGGATATGAACAAACGCGCTAAAATGCTCTATAATAATG
AAGCGTTTGAAGTTGCTCATAAGTCAGTTGAGCAGACGGGCGAAAGCGAT
GCCAATCTAATGGATGAGCGTGATGGTGGGCATTTCGTTAGTTTCGTCAA
GAGCGGCGGGAAGCTCTGGGAGCTGGAGGGGTCGAGGAAGGGGCCTCTGG
AGAGGGGAGACCTTGCTGAGAATGAGGATGTTCTTAGTCCGCGGGCGCTT
GATATGGGCATCAGGAGGATCATCAAGCTGAATGCGGATGAAGGGGGTAG
TCTGCTTTTTAGTTGCATTGCTCTGGCGCGTAAGGCATAGGGAATGCCTG
GATGGGAAATTGATATACTGTGATGGCCGCGTTCTGCAATCTTATTGGTG
GAGAAGTCTAGTCTCTGCTCTATGTGATGACTAATAGGAACCTCGGCTGT
CCGTGGCTCCACAGGCAAAGTCAGCTAGCGCAAGCGAGGACCCACCGCGC
AGGTATAAAAGGCGGCTTCCCCCCCCGAAAATTTTGGAAATCAAGCGACT
CTACGTTAGTTTCCCTACCCCCTACATTGGGCTTCAGAATCATTTGCTAA
CCACCTTTTTGCCTACAGTTCAAAGAATCACTTTAGAGTAGACGTCCCAC
CTCTGAGCTCTTCTAAAGAGCCACA
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Coding sequence (CDS) from alignment at KZ851913.1:303311..304485-

>M747DRAFT_32208-T1 ID=M747DRAFT_32208-T1|Name=M747DRAFT_32208-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1410bp|location=Sequence derived from alignment at KZ851913.1:303311..304485- (Aspergillus niger ATCC 13496)
AGAACAACCCCGACGTCATGAACCAACTAGCAGCAAAGCTAGGCCTATCT
CCGGAGCTCCAATTCTACGACGTCTATTCCCTAGATGACCCATCACAGCT
TACACACATCCCCCGACCTGCTCTGGCACTCTTAGTCATTATCCCACTTA
CACCAGCCTGGGACCAAAGCCGCAAGGCCGAAGACGCTAACAAAGAAGAA
CCCTACCCTGGCTCCGGCCGTCCTGACGAGCCAGTCATCTGGTTCAAGCA
GACCATCGGCCATGCTTGCGGATCGATCGGGCTATTACATAGTGTGATCA
ACGGTCCGGCTGTCGACTTCATCACACCTGGGTCCGATCTTGAGACGATA
CGGAACCTCGCCATACCGCTGGATATGAACAAACGCGCTAAAATGCTCTA
TAATAATGAAGCGTTTGAAGTTGCTCATAAGTCAGTTGAGCAGACGGGCG
AAAGCGATGCCAATCTAATGGATGAGCGTGATGGTGGGCATTTCGTTAGT
TTCGTCAAGAGCGGCGGGAAGCTCTGGGAGCTGGAGGGGTCGAGGAAGGG
GCCTCTGGAGAGGGGAGACCTTGCTGAGAATGAGGATGTTCTTAGTCCGC
GGGCGCTTGATATGGGCATCAGGAGGATCATCAAGCTGAATGCGGATGAA
GGGGGTAGTCTGCTTTTTAGTTGCATTGCTCTGGCGCGTAAGGCATAGAT
GATTGAGAACAACCCCGACGTCATGAACCAACTAGCAGCAAAGCTAGGCC
TATCTCCGGAGCTCCAATTCTACGACGTCTATTCCCTAGATGACCCATCA
CAGCTTACACACATCCCCCGACCTGCTCTGGCACTCTTAGTCATTATCCC
ACTTACACCAGCCTGGGACCAAAGCCGCAAGGCCGAAGACGCTAACAAAG
AAGAACCCTACCCTGGCTCCGGCCGTCCTGACGAGCCAGTCATCTGGTTC
AAGCAGACCATCGGCCATGCTTGCGGATCGATCGGGCTATTACATAGTGT
GATCAACGGTCCGGCTGTCGACTTCATCACACCTGGGTCCGATCTTGAGA
CGATACGGAACCTCGCCATACCGCTGGATATGAACAAACGCGCTAAAATG
CTCTATAATAATGAAGCGTTTGAAGTTGCTCATAAGTCAGTTGAGCAGAC
GGGCGAAAGCGATGCCAATCTAATGGATGAGCGTGATGGTGGGCATTTCG
TTAGTTTCGTCAAGAGCGGCGGGAAGCTCTGGGAGCTGGAGGGGTCGAGG
AAGGGGCCTCTGGAGAGGGGAGACCTTGCTGAGAATGAGGATGTTCTTAG
TCCGCGGGCGCTTGATATGGGCATCAGGAGGATCATCAAGCTGAATGCGG
ATGAAGGGGGTAGTCTGCTTTTTAGTTGCATTGCTCTGGCGCGTAAGGCA
TAGATGATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_32208M747DRAFT_32208Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_32208-T1M747DRAFT_32208-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_32208-T1.cdsM747DRAFT_32208-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_32208-T1.utr3p2M747DRAFT_32208-T1.utr3p2Aspergillus niger ATCC 13496three_prime_UTR
M747DRAFT_32208-T1.utr3p1M747DRAFT_32208-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_32208-T1.exon3M747DRAFT_32208-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_32208-T1.exon2M747DRAFT_32208-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_32208-T1.exon1M747DRAFT_32208-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_32208-T1.utr5p1M747DRAFT_32208-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteMEROPS:MER0000836
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR036959
DBxrefInterPro:IPR001578
DBxrefPFAM:PF01088
Productubiquitin carboxyl-terminal hydrolase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851913.1supercontigKZ851913.1:303311..304485 -
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