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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851911.1:569524..571377+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_322702-T1 ID=M747DRAFT_322702-T1|Name=M747DRAFT_322702-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1854bp|location=Sequence derived from alignment at KZ851911.1:569524..571377+ (Aspergillus niger ATCC 13496)
ATGAAGCTCCCCATCCTAGTGACTCTATTTATTACTCTGCCCGCGCTTTG
CGTGTCTAGCAAAACTCCTTCCGCGCCTACGATCTCTGCATATCCGAAAT
CTCCAGGGAACTTCAAGCCCGCCTCTGGACGCCAGAACAGCACAAGCAAT
GTCTGTGAGGTCAAGCCGAACCAAACAGATGCTGCCCCTGGTATTCTTGC
CGCAGCCCACACTTGCAACAATGGGGGCACCGTTTTCCTACCACCGGGTG
ACTTTGTCGTCGCAACCGCACTGGATCTCACATTTCTAAACAACATCGAT
TTTGCCATCTGGGGCAACATCACTTTCAAAAAGGATATCGATCTCTGGAC
AACCCAGGCATTTCAATACACATTCCAGACTGCGAGTCTTTTCTGGCGAT
TCGGAGGCAATAACGTGAACATCTACGGCGATGGGAAGGGGGTGATTGAT
GGTGAATATTTTTTTTCTTGGTGCTGGATTTGCTAGGGAAAGATTAATGA
CCTTGATGTTCTAATATAGGAGCTGGTCAATACTGGTGGAGTGCGATGGC
TGAGGATTCCAGTGTCATGCGTCCTTGCCTCCTGGGCACAGACGGACTGC
ATCATGCCACCATTTCTGGGCTCACGATGCTCAACTCCCCAAATTGGTTC
AACCTGATTGCAAACTCCACGGACATCCTCATCAGTAATATGACAATGTT
GGTGGAGAGTGAGATATCGGATGCTCCAGCCAAGGTGCGACTTATAATAT
CACCCCTGTTTCCATCTGCTATAGCCTACTGCTACCTGAACCTGACTTGT
ACTGTGACTAGAACACAGATGGCTGGGACATCTACCGCAGCTCGAATATC
GTGATCCAAGACTCAAGAATTGTCAACACGGACGGTAAGCCATGGCATTC
CGTAACTGTATTCTCTGAAACGTCACTCATGGTCTCCGCCTTAGACTGTG
TATCGTTCAAACCAAACTCCACCCAGATTGTCATCCAAAATCTCGACTGC
ACTGGTTCCCACGGTATTTCTGTCGGCAGCTTGGGTCAATACCAAGGGGA
AACGGATATCGTCGAAGATCTGTACATCTATAACATCTCCATGACAGATG
CATCAGATGTGGCCCGAATCAAGGTCTGGCCTGGTGTTCCTGCTGATACG
TCAGGATCAACCAGCGGTGGAGGACTAGGCCGCGTCCGCAACGTTACCTA
TGAACACATGCAAAGCGAGAATAACGATCACATCATTTCGGTCTCGCAGT
GCTATGAGTCGAAGAACCAAACGATGTGCGATTCATATCCTGTACGTACT
TACAAGCTCCTGATAGGCAAAAGATTCAATAGCAGCAAAAAACTGATCAG
TCTTTCAAAGTCAAAACTCGTGATTGAGGATGTACTTTTCAAGGACTTTA
AGGGAACGACATCTAAGAAGTACGATCCTGAGATTGGAGAGTTGACATGT
AGTAGTCCGGATGTAGGTTTCTTTGCTGCAACTTTGCATTGCAGATTGAC
CCACGGCCACTAACAGCTGCTAGGTCTGCCATAATATCACTGTCCAAGAC
ATCAATGTGACTCCACCCAGTGGTGACTCTCCCACTTTCACCTGCAACAA
TATGGGGAATTCGAATTTGGAGGACATTACGTGTGCCTGACTTCGGGGTA
CCTCTGTCTTTCACAGTAGCCAGGCACTATCCCTGATCCTGTGCCGCCTA
CGTGGCCTTACCTATCCCCCCTTTGGGTCTTTCTCTATTTGGGATCTTGA
TAGTAACACATCTGGCCCCACATGTTGATACCTTGAGATCTTTCCCCATG
GCATCGTGTAATCTAGGATACTCGAAGGAACAAAGCAGAAACTGGAAGCT
GCAT back to topCoding sequence (CDS) from alignment at KZ851911.1:569524..571377+ >M747DRAFT_322702-T1 ID=M747DRAFT_322702-T1|Name=M747DRAFT_322702-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=7830bp|location=Sequence derived from alignment at KZ851911.1:569524..571377+ (Aspergillus niger ATCC 13496)
ATGAAGCTCCCCATCCTAGTGACTCTATTTATTACTCTGCCCGCGCTTTG
CGTGTCTAGCAAAACTCCTTCCGCGCCTACGATCTCTGCATATCCGAAAT
CTCCAGGGAACTTCAAGCCCGCCTCTGGACGCCAGAACAGCACAAGCAAT
GTCTGTGAGGTCAAGCCGAACCAAACAGATGCTGCCCCTGGTATTCTTGC
CGCAGCCCACACTTGCAACAATGGGGGCACCGTTTTCCTACCACCGGGTG
ACTTTGTCGTCGCAACCGCACTGGATCTCACATTTCTAAACAACATCGAT
TTTGCCATCTGGGGCAACATCACTTTCAAAAAGGATATCGATCTCTGGAC
AACCCAGGCATTTCAATACACATTCCAGACTGCGAGTCTTTTCTGGCGAT
TCGGAGGCAATAACGTGAACATCTACGGCGATGGGAAGGGGGTGATTGAT
GGAGCTGGTCAATACTGGTGGAGTGCGATGGCTGAGGATTCCAGTGTCAT
GCGTCCTTGCCTCCTGGGCACAGACGGACTGCATCATGCCACCATTTCTG
GGCTCACGATGCTCAACTCCCCAAATTGGTTCAACCTGATTGCAAACTCC
ACGGACATCCTCATCAGTAATATGACAATGTTGGTGGAGAGTGAGATATC
GGATGCTCCAGCCAAGAACACAGATGGCTGGGACATCTACCGCAGCTCGA
ATATCGTGATCCAAGACTCAAGAATTGTCAACACGGACGACTGTGTATCG
TTCAAACCAAACTCCACCCAGATTGTCATCCAAAATCTCGACTGCACTGG
TTCCCACGGTATTTCTGTCGGCAGCTTGGGTCAATACCAAGGGGAAACGG
ATATCGTCGAAGATCTGTACATCTATAACATCTCCATGACAGATGCATCA
GATGTGGCCCGAATCAAGGTCTGGCCTGGTGTTCCTGCTGATACGTCAGG
ATCAACCAGCGGTGGAGGACTAGGCCGCGTCCGCAACGTTACCTATGAAC
ACATGCAAAGCGAGAATAACGATCACATCATTTCGGTCTCGCAGTGCTAT
GAGTCGAAGAACCAAACGATGTGCGATTCATATCCTTCAAAACTCGTGAT
TGAGGATGTACTTTTCAAGGACTTTAAGGGAACGACATCTAAGAAGTACG
ATCCTGAGATTGGAGAGTTGACATGTAGTAGTCCGGATGTCTGCCATAAT
ATCACTGTCCAAGACATCAATGTGACTCCACCCAGTGGTGACTCTCCCAC
TTTCACCTGCAACAATATGGGGAATTCGAATTTGGAGGACATTACGTGTG
CCTGAATGAAGCTCCCCATCCTAGTGACTCTATTTATTACTCTGCCCGCG
CTTTGCGTGTCTAGCAAAACTCCTTCCGCGCCTACGATCTCTGCATATCC
GAAATCTCCAGGGAACTTCAAGCCCGCCTCTGGACGCCAGAACAGCACAA
GCAATGTCTGTGAGGTCAAGCCGAACCAAACAGATGCTGCCCCTGGTATT
CTTGCCGCAGCCCACACTTGCAACAATGGGGGCACCGTTTTCCTACCACC
GGGTGACTTTGTCGTCGCAACCGCACTGGATCTCACATTTCTAAACAACA
TCGATTTTGCCATCTGGGGCAACATCACTTTCAAAAAGGATATCGATCTC
TGGACAACCCAGGCATTTCAATACACATTCCAGACTGCGAGTCTTTTCTG
GCGATTCGGAGGCAATAACGTGAACATCTACGGCGATGGGAAGGGGGTGA
TTGATGGAGCTGGTCAATACTGGTGGAGTGCGATGGCTGAGGATTCCAGT
GTCATGCGTCCTTGCCTCCTGGGCACAGACGGACTGCATCATGCCACCAT
TTCTGGGCTCACGATGCTCAACTCCCCAAATTGGTTCAACCTGATTGCAA
ACTCCACGGACATCCTCATCAGTAATATGACAATGTTGGTGGAGAGTGAG
ATATCGGATGCTCCAGCCAAGAACACAGATGGCTGGGACATCTACCGCAG
CTCGAATATCGTGATCCAAGACTCAAGAATTGTCAACACGGACGACTGTG
TATCGTTCAAACCAAACTCCACCCAGATTGTCATCCAAAATCTCGACTGC
ACTGGTTCCCACGGTATTTCTGTCGGCAGCTTGGGTCAATACCAAGGGGA
AACGGATATCGTCGAAGATCTGTACATCTATAACATCTCCATGACAGATG
CATCAGATGTGGCCCGAATCAAGGTCTGGCCTGGTGTTCCTGCTGATACG
TCAGGATCAACCAGCGGTGGAGGACTAGGCCGCGTCCGCAACGTTACCTA
TGAACACATGCAAAGCGAGAATAACGATCACATCATTTCGGTCTCGCAGT
GCTATGAGTCGAAGAACCAAACGATGTGCGATTCATATCCTTCAAAACTC
GTGATTGAGGATGTACTTTTCAAGGACTTTAAGGGAACGACATCTAAGAA
GTACGATCCTGAGATTGGAGAGTTGACATGTAGTAGTCCGGATGTCTGCC
ATAATATCACTGTCCAAGACATCAATGTGACTCCACCCAGTGGTGACTCT
CCCACTTTCACCTGCAACAATATGGGGAATTCGAATTTGGAGGACATTAC
GTGTGCCTGAATGAAGCTCCCCATCCTAGTGACTCTATTTATTACTCTGC
CCGCGCTTTGCGTGTCTAGCAAAACTCCTTCCGCGCCTACGATCTCTGCA
TATCCGAAATCTCCAGGGAACTTCAAGCCCGCCTCTGGACGCCAGAACAG
CACAAGCAATGTCTGTGAGGTCAAGCCGAACCAAACAGATGCTGCCCCTG
GTATTCTTGCCGCAGCCCACACTTGCAACAATGGGGGCACCGTTTTCCTA
CCACCGGGTGACTTTGTCGTCGCAACCGCACTGGATCTCACATTTCTAAA
CAACATCGATTTTGCCATCTGGGGCAACATCACTTTCAAAAAGGATATCG
ATCTCTGGACAACCCAGGCATTTCAATACACATTCCAGACTGCGAGTCTT
TTCTGGCGATTCGGAGGCAATAACGTGAACATCTACGGCGATGGGAAGGG
GGTGATTGATGGAGCTGGTCAATACTGGTGGAGTGCGATGGCTGAGGATT
CCAGTGTCATGCGTCCTTGCCTCCTGGGCACAGACGGACTGCATCATGCC
ACCATTTCTGGGCTCACGATGCTCAACTCCCCAAATTGGTTCAACCTGAT
TGCAAACTCCACGGACATCCTCATCAGTAATATGACAATGTTGGTGGAGA
GTGAGATATCGGATGCTCCAGCCAAGAACACAGATGGCTGGGACATCTAC
CGCAGCTCGAATATCGTGATCCAAGACTCAAGAATTGTCAACACGGACGA
CTGTGTATCGTTCAAACCAAACTCCACCCAGATTGTCATCCAAAATCTCG
ACTGCACTGGTTCCCACGGTATTTCTGTCGGCAGCTTGGGTCAATACCAA
GGGGAAACGGATATCGTCGAAGATCTGTACATCTATAACATCTCCATGAC
AGATGCATCAGATGTGGCCCGAATCAAGGTCTGGCCTGGTGTTCCTGCTG
ATACGTCAGGATCAACCAGCGGTGGAGGACTAGGCCGCGTCCGCAACGTT
ACCTATGAACACATGCAAAGCGAGAATAACGATCACATCATTTCGGTCTC
GCAGTGCTATGAGTCGAAGAACCAAACGATGTGCGATTCATATCCTTCAA
AACTCGTGATTGAGGATGTACTTTTCAAGGACTTTAAGGGAACGACATCT
AAGAAGTACGATCCTGAGATTGGAGAGTTGACATGTAGTAGTCCGGATGT
CTGCCATAATATCACTGTCCAAGACATCAATGTGACTCCACCCAGTGGTG
ACTCTCCCACTTTCACCTGCAACAATATGGGGAATTCGAATTTGGAGGAC
ATTACGTGTGCCTGAATGAAGCTCCCCATCCTAGTGACTCTATTTATTAC
TCTGCCCGCGCTTTGCGTGTCTAGCAAAACTCCTTCCGCGCCTACGATCT
CTGCATATCCGAAATCTCCAGGGAACTTCAAGCCCGCCTCTGGACGCCAG
AACAGCACAAGCAATGTCTGTGAGGTCAAGCCGAACCAAACAGATGCTGC
CCCTGGTATTCTTGCCGCAGCCCACACTTGCAACAATGGGGGCACCGTTT
TCCTACCACCGGGTGACTTTGTCGTCGCAACCGCACTGGATCTCACATTT
CTAAACAACATCGATTTTGCCATCTGGGGCAACATCACTTTCAAAAAGGA
TATCGATCTCTGGACAACCCAGGCATTTCAATACACATTCCAGACTGCGA
GTCTTTTCTGGCGATTCGGAGGCAATAACGTGAACATCTACGGCGATGGG
AAGGGGGTGATTGATGGAGCTGGTCAATACTGGTGGAGTGCGATGGCTGA
GGATTCCAGTGTCATGCGTCCTTGCCTCCTGGGCACAGACGGACTGCATC
ATGCCACCATTTCTGGGCTCACGATGCTCAACTCCCCAAATTGGTTCAAC
CTGATTGCAAACTCCACGGACATCCTCATCAGTAATATGACAATGTTGGT
GGAGAGTGAGATATCGGATGCTCCAGCCAAGAACACAGATGGCTGGGACA
TCTACCGCAGCTCGAATATCGTGATCCAAGACTCAAGAATTGTCAACACG
GACGACTGTGTATCGTTCAAACCAAACTCCACCCAGATTGTCATCCAAAA
TCTCGACTGCACTGGTTCCCACGGTATTTCTGTCGGCAGCTTGGGTCAAT
ACCAAGGGGAAACGGATATCGTCGAAGATCTGTACATCTATAACATCTCC
ATGACAGATGCATCAGATGTGGCCCGAATCAAGGTCTGGCCTGGTGTTCC
TGCTGATACGTCAGGATCAACCAGCGGTGGAGGACTAGGCCGCGTCCGCA
ACGTTACCTATGAACACATGCAAAGCGAGAATAACGATCACATCATTTCG
GTCTCGCAGTGCTATGAGTCGAAGAACCAAACGATGTGCGATTCATATCC
TTCAAAACTCGTGATTGAGGATGTACTTTTCAAGGACTTTAAGGGAACGA
CATCTAAGAAGTACGATCCTGAGATTGGAGAGTTGACATGTAGTAGTCCG
GATGTCTGCCATAATATCACTGTCCAAGACATCAATGTGACTCCACCCAG
TGGTGACTCTCCCACTTTCACCTGCAACAATATGGGGAATTCGAATTTGG
AGGACATTACGTGTGCCTGAATGAAGCTCCCCATCCTAGTGACTCTATTT
ATTACTCTGCCCGCGCTTTGCGTGTCTAGCAAAACTCCTTCCGCGCCTAC
GATCTCTGCATATCCGAAATCTCCAGGGAACTTCAAGCCCGCCTCTGGAC
GCCAGAACAGCACAAGCAATGTCTGTGAGGTCAAGCCGAACCAAACAGAT
GCTGCCCCTGGTATTCTTGCCGCAGCCCACACTTGCAACAATGGGGGCAC
CGTTTTCCTACCACCGGGTGACTTTGTCGTCGCAACCGCACTGGATCTCA
CATTTCTAAACAACATCGATTTTGCCATCTGGGGCAACATCACTTTCAAA
AAGGATATCGATCTCTGGACAACCCAGGCATTTCAATACACATTCCAGAC
TGCGAGTCTTTTCTGGCGATTCGGAGGCAATAACGTGAACATCTACGGCG
ATGGGAAGGGGGTGATTGATGGAGCTGGTCAATACTGGTGGAGTGCGATG
GCTGAGGATTCCAGTGTCATGCGTCCTTGCCTCCTGGGCACAGACGGACT
GCATCATGCCACCATTTCTGGGCTCACGATGCTCAACTCCCCAAATTGGT
TCAACCTGATTGCAAACTCCACGGACATCCTCATCAGTAATATGACAATG
TTGGTGGAGAGTGAGATATCGGATGCTCCAGCCAAGAACACAGATGGCTG
GGACATCTACCGCAGCTCGAATATCGTGATCCAAGACTCAAGAATTGTCA
ACACGGACGACTGTGTATCGTTCAAACCAAACTCCACCCAGATTGTCATC
CAAAATCTCGACTGCACTGGTTCCCACGGTATTTCTGTCGGCAGCTTGGG
TCAATACCAAGGGGAAACGGATATCGTCGAAGATCTGTACATCTATAACA
TCTCCATGACAGATGCATCAGATGTGGCCCGAATCAAGGTCTGGCCTGGT
GTTCCTGCTGATACGTCAGGATCAACCAGCGGTGGAGGACTAGGCCGCGT
CCGCAACGTTACCTATGAACACATGCAAAGCGAGAATAACGATCACATCA
TTTCGGTCTCGCAGTGCTATGAGTCGAAGAACCAAACGATGTGCGATTCA
TATCCTTCAAAACTCGTGATTGAGGATGTACTTTTCAAGGACTTTAAGGG
AACGACATCTAAGAAGTACGATCCTGAGATTGGAGAGTTGACATGTAGTA
GTCCGGATGTCTGCCATAATATCACTGTCCAAGACATCAATGTGACTCCA
CCCAGTGGTGACTCTCCCACTTTCACCTGCAACAATATGGGGAATTCGAA
TTTGGAGGACATTACGTGTGCCTGAATGAAGCTCCCCATCCTAGTGACTC
TATTTATTACTCTGCCCGCGCTTTGCGTGTCTAGCAAAACTCCTTCCGCG
CCTACGATCTCTGCATATCCGAAATCTCCAGGGAACTTCAAGCCCGCCTC
TGGACGCCAGAACAGCACAAGCAATGTCTGTGAGGTCAAGCCGAACCAAA
CAGATGCTGCCCCTGGTATTCTTGCCGCAGCCCACACTTGCAACAATGGG
GGCACCGTTTTCCTACCACCGGGTGACTTTGTCGTCGCAACCGCACTGGA
TCTCACATTTCTAAACAACATCGATTTTGCCATCTGGGGCAACATCACTT
TCAAAAAGGATATCGATCTCTGGACAACCCAGGCATTTCAATACACATTC
CAGACTGCGAGTCTTTTCTGGCGATTCGGAGGCAATAACGTGAACATCTA
CGGCGATGGGAAGGGGGTGATTGATGGAGCTGGTCAATACTGGTGGAGTG
CGATGGCTGAGGATTCCAGTGTCATGCGTCCTTGCCTCCTGGGCACAGAC
GGACTGCATCATGCCACCATTTCTGGGCTCACGATGCTCAACTCCCCAAA
TTGGTTCAACCTGATTGCAAACTCCACGGACATCCTCATCAGTAATATGA
CAATGTTGGTGGAGAGTGAGATATCGGATGCTCCAGCCAAGAACACAGAT
GGCTGGGACATCTACCGCAGCTCGAATATCGTGATCCAAGACTCAAGAAT
TGTCAACACGGACGACTGTGTATCGTTCAAACCAAACTCCACCCAGATTG
TCATCCAAAATCTCGACTGCACTGGTTCCCACGGTATTTCTGTCGGCAGC
TTGGGTCAATACCAAGGGGAAACGGATATCGTCGAAGATCTGTACATCTA
TAACATCTCCATGACAGATGCATCAGATGTGGCCCGAATCAAGGTCTGGC
CTGGTGTTCCTGCTGATACGTCAGGATCAACCAGCGGTGGAGGACTAGGC
CGCGTCCGCAACGTTACCTATGAACACATGCAAAGCGAGAATAACGATCA
CATCATTTCGGTCTCGCAGTGCTATGAGTCGAAGAACCAAACGATGTGCG
ATTCATATCCTTCAAAACTCGTGATTGAGGATGTACTTTTCAAGGACTTT
AAGGGAACGACATCTAAGAAGTACGATCCTGAGATTGGAGAGTTGACATG
TAGTAGTCCGGATGTCTGCCATAATATCACTGTCCAAGACATCAATGTGA
CTCCACCCAGTGGTGACTCTCCCACTTTCACCTGCAACAATATGGGGAAT
TCGAATTTGGAGGACATTACGTGTGCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| DBxref | PFAM:PF00295 |
| Product | exo-polygalacturonase A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851911.1 | supercontig | KZ851911.1:569524..571377 + |
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