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M747DRAFT_322820-T1, M747DRAFT_322820-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_322820-T1
Unique NameM747DRAFT_322820-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:261421..263475-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_322820-T1 ID=M747DRAFT_322820-T1|Name=M747DRAFT_322820-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2055bp|location=Sequence derived from alignment at KZ851912.1:261421..263475- (Aspergillus niger ATCC 13496)
CCAATCTCGCCATTTTACCCAGTCATGATGTCGAAGAGACAAGCTGAGCT
GTCGCTCGAGGAAGAGCTCGCAGCAGGCTCTCCTGCCTCGAAGAAAGCGC
GTGTGGAGGACGAAGAGCTGCCGGAGGACGACCCGCGCCGTGGAGCTTTG
CCGATTCGCCGGGCGACTGGACAGCAACTTGAAGAACATGAGCGCAGCGG
ACAAGATATTCTTGCAGCTGCTGATCAGGAAGGCGAAGAGCTAGCGGAAG
CAGCGCAAGATGGAGGCCCCGAATCGTCCGATATTGATGCTGATGACGAC
AAACCGGTTATCGCGGCCCCGAAACGTCAGAGCGCCCCCATGGAGGGCTA
CAGCGACCTGTACCTCGATACGATCAATCGCGAAATCCTCGACTTCGATT
TTGAAAAGCTATGCTCGGTCAGCTTGTCGAATATTAATGTGTACGCTTGT
CTGGTGTGCGGCAAATACTTCCAGGGCAGAGGACCGAAGTCGCATGCTTA
TTTCCATGCGCTTGAGGTCGGACACCATGTTTTCGTCAATATGGGTACTA
AAAAGGTCTACGTTCTCCCGGAAGGCTATGAGGTTAAGAACCAGAGCTTG
GACGATATCAAATACGTGGTGGACCCGTACTACAGCAAGGATGAGGTGAT
GAAGCTGGACAAGGAAGTACACGACGCATTCGACCTGGCAGGAAACCGTT
ATAGGCCTGGTAAGACACTCAGACTGTTTATATTGCTAAAGACAATGTGT
TAATCATTTGCAGGTTTTGTTGGCATGAATAACATCAAAGCCAACGATTA
TCTGAACGTGGTGGTCCAGCTCTTAGCTCACGTCTTCCCCATTCGCAATT
ACTTCCTGCTGCATGAATTCCCTCAACCAGGAACGCCTCAATTAGCACTC
CGCTTCAGTACCCTAGTCCGAAAACTATGGAACCCTAAGGCATTTCGCTC
CCATGTATCTCCGCACGAACTGTTGCAGGAGATCGCTCTCCGCTCATCCA
AGCGCTTTACCCTCACACAGCAGTCCGATCCAGTGGAGTTCATGTCGTGG
TTCTTGAACAACCTCCACCTCTCTCTTGGAGGGTCCAAGAAACCATCCAA
GACACCTACAAGCGTTGTACAAGCCGCATTCCAGGGTCACTTGAGGATCG
AAAGCCAGGCTATCACAGCCCATTCAGATACCCAAAACGCGCGTCTAGTT
TTCACCGAATCCGGCTCCATCAACAGCCAAACGACACCCTTCCTCATCCT
CACCTTAGACCTACCACCCACGCCCCTTTTCCAATCCGCGAACCGGGAAT
CTATCATCCCGCAAGTCCCTCTGACTACCCTCCTGAACAAGTACAACGGA
ATCACCGCCTCCGAAAAACTCGCCCACAGAGTCCGCCACAGGCTCCTCCA
CCCCCTTCCTCCCTACCTCCTCTTCCACATCAAGCGCTTCAGCAAGAACC
GCTTCGTCTCCGAACGTAACCCCACAATCGTGACCTTCCCATCCCCTCGC
TCATTAGACATGTCGCCCTATGTTGAGCCAAACCCAGAGATCTGGCCTCC
AGGGGAACCGATCCTCTACGATCTCGTCGCAAACATCATCCTCGACCCTA
CTGTCGCCGCTCCAGGTGCTCACGAGGAAGCCGCAGCAGACAAAGGAGTC
AATGCTGCTAGCGGAAAAGCTTCGTCAGGAGCTGGAGCTGGCAGCGAGAA
AGTCTCCTGGCTTGTTCAGTTGCATGATAAAGCTATGTCTGCGGAGAATG
GTCGGCTTCAGAAAGAACATGCTGGCGAGCAGCGTGGACCCGAGTGGCTG
GAGATTCAGGATCTGTTTGTCAAGCGAGCAGAAAGCGAAACTTTGTTCAC
GAAGGAAGGGTACTTGATGGTATGGGAACGTCGAAAGGTTCCTGGCGTGC
CGAATCGTAAGGGGAAGAATCCGGCTAAGTGATACCGGGATATTTGTGGA
TGTGGTGTCTTGTTAAATACTGCTTGTTGAACGGTCCCGACTGTAGGCCT
TGGCACGGAGGGGCTACTGTATAATTAAGAATCTACGACGATGATAGAAT
TAACC
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Coding sequence (CDS) from alignment at KZ851912.1:261421..263475-

>M747DRAFT_322820-T1 ID=M747DRAFT_322820-T1|Name=M747DRAFT_322820-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3708bp|location=Sequence derived from alignment at KZ851912.1:261421..263475- (Aspergillus niger ATCC 13496)
GTTTTGTTGGCATGAATAACATCAAAGCCAACGATTATCTGAACGTGGTG
GTCCAGCTCTTAGCTCACGTCTTCCCCATTCGCAATTACTTCCTGCTGCA
TGAATTCCCTCAACCAGGAACGCCTCAATTAGCACTCCGCTTCAGTACCC
TAGTCCGAAAACTATGGAACCCTAAGGCATTTCGCTCCCATGTATCTCCG
CACGAACTGTTGCAGGAGATCGCTCTCCGCTCATCCAAGCGCTTTACCCT
CACACAGCAGTCCGATCCAGTGGAGTTCATGTCGTGGTTCTTGAACAACC
TCCACCTCTCTCTTGGAGGGTCCAAGAAACCATCCAAGACACCTACAAGC
GTTGTACAAGCCGCATTCCAGGGTCACTTGAGGATCGAAAGCCAGGCTAT
CACAGCCCATTCAGATACCCAAAACGCGCGTCTAGTTTTCACCGAATCCG
GCTCCATCAACAGCCAAACGACACCCTTCCTCATCCTCACCTTAGACCTA
CCACCCACGCCCCTTTTCCAATCCGCGAACCGGGAATCTATCATCCCGCA
AGTCCCTCTGACTACCCTCCTGAACAAGTACAACGGAATCACCGCCTCCG
AAAAACTCGCCCACAGAGTCCGCCACAGGCTCCTCCACCCCCTTCCTCCC
TACCTCCTCTTCCACATCAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGA
ACGTAACCCCACAATCGTGACCTTCCCATCCCCTCGCTCATTAGACATGT
CGCCCTATGTTGAGCCAAACCCAGAGATCTGGCCTCCAGGGGAACCGATC
CTCTACGATCTCGTCGCAAACATCATCCTCGACCCTACTGTCGCCGCTCC
AGGTGCTCACGAGGAAGCCGCAGCAGACAAAGGAGTCAATGCTGCTAGCG
GAAAAGCTTCGTCAGGAGCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTT
GTTCAGTTGCATGATAAAGCTATGTCTGCGGAGAATGGTCGGCTTCAGAA
AGAACATGCTGGCGAGCAGCGTGGACCCGAGTGGCTGGAGATTCAGGATC
TGTTTGTCAAGCGAGCAGAAAGCGAAACTTTGTTCACGAAGGAAGGGTAC
TTGATGGTATGGGAACGTCGAAAGGTTCCTGGCGTGCCGAATCGTAAGGG
GAAGAATCCGGCTAAGTGAATGATGTCGAAGAGACAAGCTGAGCTGTCGC
TCGAGGAAGAGCTCGCAGCAGGCTCTCCTGCCTCGAAGAAAGCGCGTGTG
GAGGACGAAGAGCTGCCGGAGGACGACCCGCGCCGTGGAGCTTTGCCGAT
TCGCCGGGCGACTGGACAGCAACTTGAAGAACATGAGCGCAGCGGACAAG
ATATTCTTGCAGCTGCTGATCAGGAAGGCGAAGAGCTAGCGGAAGCAGCG
CAAGATGGAGGCCCCGAATCGTCCGATATTGATGCTGATGACGACAAACC
GGTTATCGCGGCCCCGAAACGTCAGAGCGCCCCCATGGAGGGCTACAGCG
ACCTGTACCTCGATACGATCAATCGCGAAATCCTCGACTTCGATTTTGAA
AAGCTATGCTCGGTCAGCTTGTCGAATATTAATGTGTACGCTTGTCTGGT
GTGCGGCAAATACTTCCAGGGCAGAGGACCGAAGTCGCATGCTTATTTCC
ATGCGCTTGAGGTCGGACACCATGTTTTCGTCAATATGGGTACTAAAAAG
GTCTACGTTCTCCCGGAAGGCTATGAGGTTAAGAACCAGAGCTTGGACGA
TATCAAATACGTGGTGGACCCGTACTACAGCAAGGATGAGGTGATGAAGC
TGGACAAGGAAGTACACGACGCATTCGACCTGGCAGGAAACCGTTATAGG
CCTGGTTTTGTTGGCATGAATAACATCAAAGCCAACGATTATCTGAACGT
GGTGGTCCAGCTCTTAGCTCACGTCTTCCCCATTCGCAATTACTTCCTGC
TGCATGAATTCCCTCAACCAGGAACGCCTCAATTAGCACTCCGCTTCAGT
ACCCTAGTCCGAAAACTATGGAACCCTAAGGCATTTCGCTCCCATGTATC
TCCGCACGAACTGTTGCAGGAGATCGCTCTCCGCTCATCCAAGCGCTTTA
CCCTCACACAGCAGTCCGATCCAGTGGAGTTCATGTCGTGGTTCTTGAAC
AACCTCCACCTCTCTCTTGGAGGGTCCAAGAAACCATCCAAGACACCTAC
AAGCGTTGTACAAGCCGCATTCCAGGGTCACTTGAGGATCGAAAGCCAGG
CTATCACAGCCCATTCAGATACCCAAAACGCGCGTCTAGTTTTCACCGAA
TCCGGCTCCATCAACAGCCAAACGACACCCTTCCTCATCCTCACCTTAGA
CCTACCACCCACGCCCCTTTTCCAATCCGCGAACCGGGAATCTATCATCC
CGCAAGTCCCTCTGACTACCCTCCTGAACAAGTACAACGGAATCACCGCC
TCCGAAAAACTCGCCCACAGAGTCCGCCACAGGCTCCTCCACCCCCTTCC
TCCCTACCTCCTCTTCCACATCAAGCGCTTCAGCAAGAACCGCTTCGTCT
CCGAACGTAACCCCACAATCGTGACCTTCCCATCCCCTCGCTCATTAGAC
ATGTCGCCCTATGTTGAGCCAAACCCAGAGATCTGGCCTCCAGGGGAACC
GATCCTCTACGATCTCGTCGCAAACATCATCCTCGACCCTACTGTCGCCG
CTCCAGGTGCTCACGAGGAAGCCGCAGCAGACAAAGGAGTCAATGCTGCT
AGCGGAAAAGCTTCGTCAGGAGCTGGAGCTGGCAGCGAGAAAGTCTCCTG
GCTTGTTCAGTTGCATGATAAAGCTATGTCTGCGGAGAATGGTCGGCTTC
AGAAAGAACATGCTGGCGAGCAGCGTGGACCCGAGTGGCTGGAGATTCAG
GATCTGTTTGTCAAGCGAGCAGAAAGCGAAACTTTGTTCACGAAGGAAGG
GTACTTGATGGTATGGGAACGTCGAAAGGTTCCTGGCGTGCCGAATCGTA
AGGGGAAGAATCCGGCTAAGTGAATGATGTCGAAGAGACAAGCTGAGCTG
TCGCTCGAGGAAGAGCTCGCAGCAGGCTCTCCTGCCTCGAAGAAAGCGCG
TGTGGAGGACGAAGAGCTGCCGGAGGACGACCCGCGCCGTGGAGCTTTGC
CGATTCGCCGGGCGACTGGACAGCAACTTGAAGAACATGAGCGCAGCGGA
CAAGATATTCTTGCAGCTGCTGATCAGGAAGGCGAAGAGCTAGCGGAAGC
AGCGCAAGATGGAGGCCCCGAATCGTCCGATATTGATGCTGATGACGACA
AACCGGTTATCGCGGCCCCGAAACGTCAGAGCGCCCCCATGGAGGGCTAC
AGCGACCTGTACCTCGATACGATCAATCGCGAAATCCTCGACTTCGATTT
TGAAAAGCTATGCTCGGTCAGCTTGTCGAATATTAATGTGTACGCTTGTC
TGGTGTGCGGCAAATACTTCCAGGGCAGAGGACCGAAGTCGCATGCTTAT
TTCCATGCGCTTGAGGTCGGACACCATGTTTTCGTCAATATGGGTACTAA
AAAGGTCTACGTTCTCCCGGAAGGCTATGAGGTTAAGAACCAGAGCTTGG
ACGATATCAAATACGTGGTGGACCCGTACTACAGCAAGGATGAGGTGATG
AAGCTGGACAAGGAAGTACACGACGCATTCGACCTGGCAGGAAACCGTTA
TAGGCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000245spliceosomal complex assembly
GO:0006397mRNA processing
GO:0016579protein deubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_322820M747DRAFT_322820Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322820-T1M747DRAFT_322820-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322820-T1.cdsM747DRAFT_322820-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322820-T1.utr3p1M747DRAFT_322820-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322820-T1.exon2M747DRAFT_322820-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_322820-T1.exon1M747DRAFT_322820-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322820-T1.utr5p1M747DRAFT_322820-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262QL6
NoteMEROPS:MER0064621
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR033809
DBxrefInterPro:IPR028889
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001394
DBxrefInterPro:IPR001607
DBxrefPFAM:PF02148
DBxrefPFAM:PF00443
ProductsnRNP assembly factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:261421..263475 -
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