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M747DRAFT_322855-T1, M747DRAFT_322855-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_322855-T1
Unique NameM747DRAFT_322855-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:430095..431984+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_322855-T1 ID=M747DRAFT_322855-T1|Name=M747DRAFT_322855-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1890bp|location=Sequence derived from alignment at KZ851912.1:430095..431984+ (Aspergillus niger ATCC 13496)
GCCCATTCCTCCCTCTTACTCTTCCTCACTCTTCCTCCTCGGTCGCGGTC
ATCTATGGCGTAAATTGCCACCTTCAAAGTCTGTCATTACACCCTTGCTC
GTCCCTCGTTATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCAC
CGCATCTCCGCGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACC
TCCGACAAAACAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGC
GGTCGATGATCACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTCCA
GGCGACAAGCCATCATCAAAGCTCACCCGGAGGTATGCACATACTCCCCC
GTGGCCTTTTCTACCAAAGATTCATTTACTGACATGACCTCCTTCGTGCT
TCCTTCAGGTTACCAAGCTCTGCGGACCAGAGCCCCTGACCAAATATGTC
GTTCTGGGCGTCGTCTCCCTTCAGATCCTCTGCGCCTACCTGCTCCGCAA
CACGTCCATGTTCGACTGGAGATTTCTCGCGACTGCATACGTGATCGGAG
CCACCTCGAACCAGAACCTCTTCCTCGCCATCCACGAGATCTCCCATAAC
CTCGCCTTCCGGTCTGCTATGGCCAACCGTCTCTTGGCCATCTTCGCCAA
TATCCCGATCGGTTTGCCCTATAGCGCTGCATTCCGGGTACGTTGGACTA
TGACATCCAGAAGCATATAAAACCAAGTATACAAGAAGCTAACTTTTCCC
GCTCCATAGCCCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGG
CCTAGATACCGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCC
TTCTAGGAAAGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTC
CGCCCCATGTTCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAA
CCTGATCACTCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCG
GCTCCCTCCAACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGC
TCTCTCCACCCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTC
CCGCGTCGACCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGA
AGAAGTCCCACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTAC
TACGGCCCCCTCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACA
CCACGACTTCCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCA
TCGCTAGCGAATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGG
GTGATCTGGACATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGT
TAAGCGTGCGCAGGGCGGTCGTCTCGTTGGTGGTGGTGGTGGTGGTAGCG
GACGCGCAGGTGAAAGCATCTCGGCTTCGTCGGCTGGTCCGGAAGGGGAG
TCGGGAGATGGGTGGAAGGAGAGTGAGATTCAGAATTGATTTGGATTATC
ATCTGTTTTCTCTACTACGTGTTGTTGTATCATGTGTACCGTGTGGACGG
TATCGCTTTCGTAGAACCTGTTTTGCTTCATGACCTGTGACATACTATAC
TAGAGATGATATCCCATGGCTTTATTGTTTCCACGATGAACTAACCTGTG
ACTGGCTGACTGATTGACTGGGTGCTGGTGCCTGTTGATACTACGCTGGG
ATGGACTAACCTTATTTGCATGACATGTCTGTTATCTACCTACCTACTTA
TCTTACAAAGTACATGTGATATAGTTGAGTATGATTAGCTTGTGTATAGC
TACTTAGTGTGGAGAATCAATTATTGTGTTTTCATCGCCG
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Coding sequence (CDS) from alignment at KZ851912.1:430095..431984+

>M747DRAFT_322855-T1 ID=M747DRAFT_322855-T1|Name=M747DRAFT_322855-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3843bp|location=Sequence derived from alignment at KZ851912.1:430095..431984+ (Aspergillus niger ATCC 13496)
ATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCACCGCATCTCCG
CGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACCTCCGACAAAA
CAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGCGGTCGATGAT
CACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTCCAGGCGACAAGC
CATCATCAAAGCTCACCCGGAGGTTACCAAGCTCTGCGGACCAGAGCCCC
TGACCAAATATGTCGTTCTGGGCGTCGTCTCCCTTCAGATCCTCTGCGCC
TACCTGCTCCGCAACACGTCCATGTTCGACTGGAGATTTCTCGCGACTGC
ATACGTGATCGGAGCCACCTCGAACCAGAACCTCTTCCTCGCCATCCACG
AGATCTCCCATAACCTCGCCTTCCGGTCTGCTATGGCCAACCGTCTCTTG
GCCATCTTCGCCAATATCCCGATCGGTTTGCCCTATAGCGCTGCATTCCG
GCCCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGGCCTAGATA
CCGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCCTTCTAGGA
AAGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTCCGCCCCAT
GTTCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAACCTGATCA
CTCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCGGCTCCCTC
CAACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGCTCTCTCCA
CCCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTCCCGCGTCG
ACCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGAAGAAGTCC
CACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTACTACGGCCC
CCTCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACACCACGACT
TCCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCATCGCTAGC
GAATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGGGTGATCTG
GACATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGTTAAGCGTG
CGCAGGGCGGTCGTCTCGTTGGTGGTGGTGGTGGTGGTAGCGGACGCGCA
GGTGAAAGCATCTCGGCTTCGTCGGCTGGTCCGGAAGGGGAGTCGGGAGA
TGGGTGGAAGGAGAGTGAGATTCAGAATTGAATGTCTTCGTCCGTCGTCG
AAGCCACCGCGGATGCTTCACCGCATCTCCGCGTGTCCGCATCCAAGAAG
AGCCAGGCTCCGCAAACCACCTCCGACAAAACAGAGCCTTCTACCAGAAT
CGATCCTCCAGAAGCCTCCGCGGTCGATGATCACTTCTTTTGGACATACA
CAGAGGAGCCGCATCGCTCCAGGCGACAAGCCATCATCAAAGCTCACCCG
GAGGTTACCAAGCTCTGCGGACCAGAGCCCCTGACCAAATATGTCGTTCT
GGGCGTCGTCTCCCTTCAGATCCTCTGCGCCTACCTGCTCCGCAACACGT
CCATGTTCGACTGGAGATTTCTCGCGACTGCATACGTGATCGGAGCCACC
TCGAACCAGAACCTCTTCCTCGCCATCCACGAGATCTCCCATAACCTCGC
CTTCCGGTCTGCTATGGCCAACCGTCTCTTGGCCATCTTCGCCAATATCC
CGATCGGTTTGCCCTATAGCGCTGCATTCCGGCCCTACCATCTCACCCAC
CACAAGTCCCTCGGTGTCGCAGGCCTAGATACCGACCTTCCCACCGCCGT
CGAAGCCTTCCTCCTCGACTCCCTTCTAGGAAAGGCATTCTTCTGCACCT
TCCAGATCTTCTTCTACGCCGTCCGCCCCATGTTCATCTACAGCCCCCCC
TTCACCTCCATTCACGTCCTGAACCTGATCACTCAGCTCACCTTCGACTA
CGCTTTGACCAAGTTCTGCGGCGGCTCCCTCCAACCTCTTCTATACCTCC
TTCTGAGCTCCTTCCTAGCCGGCTCTCTCCACCCCTGTGCCGGCCACTTC
ATCGCAGAGCACTACTTCTTCTCCCGCGTCGACCACGGTACCGAGTCTAT
CCAAGAGCAGAAGAACAACCAGAAGAAGTCCCACCCTCTCGACTCCCTTC
CCCCACCGGAAACCTACTCCTACTACGGCCCCCTCAACTTCTTCACCTAC
AACGTGGGCCTGCATAACGAACACCACGACTTCCCCGCTATCCCCTGGAC
AAGACTGCACGAGCTCCACCGCATCGCTAGCGAATTCTACGAGCCCCTCC
CCTGCCACCACAGCTGGGTGTGGGTGATCTGGACATTCATCCTGGACAAG
AACGTCGGCATGTGGTGTCGGGTTAAGCGTGCGCAGGGCGGTCGTCTCGT
TGGTGGTGGTGGTGGTGGTAGCGGACGCGCAGGTGAAAGCATCTCGGCTT
CGTCGGCTGGTCCGGAAGGGGAGTCGGGAGATGGGTGGAAGGAGAGTGAG
ATTCAGAATTGAATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTC
ACCGCATCTCCGCGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCA
CCTCCGACAAAACAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCC
GCGGTCGATGATCACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTC
CAGGCGACAAGCCATCATCAAAGCTCACCCGGAGGTTACCAAGCTCTGCG
GACCAGAGCCCCTGACCAAATATGTCGTTCTGGGCGTCGTCTCCCTTCAG
ATCCTCTGCGCCTACCTGCTCCGCAACACGTCCATGTTCGACTGGAGATT
TCTCGCGACTGCATACGTGATCGGAGCCACCTCGAACCAGAACCTCTTCC
TCGCCATCCACGAGATCTCCCATAACCTCGCCTTCCGGTCTGCTATGGCC
AACCGTCTCTTGGCCATCTTCGCCAATATCCCGATCGGTTTGCCCTATAG
CGCTGCATTCCGGCCCTACCATCTCACCCACCACAAGTCCCTCGGTGTCG
CAGGCCTAGATACCGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGAC
TCCCTTCTAGGAAAGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGC
CGTCCGCCCCATGTTCATCTACAGCCCCCCCTTCACCTCCATTCACGTCC
TGAACCTGATCACTCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGC
GGCGGCTCCCTCCAACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGC
CGGCTCTCTCCACCCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCT
TCTCCCGCGTCGACCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAAC
CAGAAGAAGTCCCACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTC
CTACTACGGCCCCCTCAACTTCTTCACCTACAACGTGGGCCTGCATAACG
AACACCACGACTTCCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCAC
CGCATCGCTAGCGAATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGT
GTGGGTGATCTGGACATTCATCCTGGACAAGAACGTCGGCATGTGGTGTC
GGGTTAAGCGTGCGCAGGGCGGTCGTCTCGTTGGTGGTGGTGGTGGTGGT
AGCGGACGCGCAGGTGAAAGCATCTCGGCTTCGTCGGCTGGTCCGGAAGG
GGAGTCGGGAGATGGGTGGAAGGAGAGTGAGATTCAGAATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0042284sphingolipid delta-4 desaturase activity
Vocabulary: Biological Process
TermDefinition
GO:0030148sphingolipid biosynthetic process
GO:0006629lipid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_322855M747DRAFT_322855Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322855-T1M747DRAFT_322855-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322855-T1.utr5p1M747DRAFT_322855-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322855-T1.exon1M747DRAFT_322855-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_322855-T1.exon2M747DRAFT_322855-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_322855-T1.exon3M747DRAFT_322855-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322855-T1.cdsM747DRAFT_322855-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322855-T1.utr3p1M747DRAFT_322855-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011388
DBxrefInterPro:IPR005804
DBxrefInterPro:IPR013866
DBxrefPFAM:PF08557
DBxrefPFAM:PF00487
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:430095..431984 +
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