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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851916.1:474590..476224+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_323457-T1 ID=M747DRAFT_323457-T1|Name=M747DRAFT_323457-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1635bp|location=Sequence derived from alignment at KZ851916.1:474590..476224+ (Aspergillus niger ATCC 13496)
CTCAAACTCTGAAAATAGCAACCCTACCTTTTTTACGGGTCCGTTGTGAC
TGTTGGTCAGACACACTTTAAGCTTATCGCCAAATTTGGAGCCATGGGCG
GAGATCCTTGACCACGAGGCACGCCAGGCAGGAACAATACTACCCACCAC
CATTGCCACATTAGGCGCACGTACGCCGGAAGATGCGCTCTCAGTAATCG
ACCAAGTTATCGTAAGGATGCCGCGTAGAGCACATAAGAAGTCGCGCAAT
GGCTGCTTTGAATGTAAGCGGCGCCACATTAAAGTAAGTTTGATGGGTTC
GCCTGGCACACCTGTAGCATCAGAATCTGACTTGTGCAGTGCGACGAGAA
ACAACCGATATGTTCCAACTGTCGGTCTTCGGAACGCTCCTGCGAATACG
CGGATCCGTTCATACGGGCGGCCAGTTCGCAGTCAAGCAAGTCATCGATC
CCGTCACCTGCTGGCACGGTGACGGATGAACTACCCCTGCGTTCGCCTGC
ACATCCCTCTTCTCTTTCTGAAAGTCCCCCAGTCAACATGCTTCACGCTG
AGCTGTTCTTCAACTTGACAAATTACACCCTTTGCGGCCTCAGCGAAGGG
GAGACTGGATGGATTGGTACCCCGGACGTGATGCGAATTGTTGTCTCGAC
GCCCTATCTCATCAATCAAGTCCTTGCACTAAGTGCTCTACACTTGAGTG
TAGCGCGTCCAGGAAATAGAGAGTGGTATCGGCGCCATGCAGCCCATCTA
CAAACGCATGCATTGGAGATTTACAATCAAAGGAGACTCGAATTTGACCA
GGAGAGCAGTGTCCCACTATTTCTTTTCTCCTGCATCCTCGGCATGCATA
CTCTCTGTGACGTCTTGGTTCACCGTGAAGACACCAGTTTCGATAGATTT
CTGGAACGATTCGTGCATTGCCTGAAACTCCAACTTGGTATTCGCGTCGT
GATTTCTTCGACCACGTGGCAATCACTACAGGAGTCAATTCTCAAGAAAC
CGCTTCAAGACGGAGCAATCTTGTTCAATTGGGATACGAATCTGGGACCC
GAGTGCGCAAGACTCTTGCGGCTCATTGAAGGAGCTAAATTGGGCGATGC
CATTACTTCCACCTATCGCAGTGCGGTCCAGGCGCTGCAAAAGTCCATGA
ATGCAGCCATGAGAGGTTCGCTGAAGAATATAAGCGGAGTTACGGGCTGG
CCTGTCATAGTCAGCCCAGAATATGCCGAACATTTGGCAATGCAACGGCC
CGAAGCTCTGGTAATCCTGGCTCATTACGCTGTGATTCTACACTGGCATC
GGCACTTCTGGTTGTTTGGCGATGGTGGCCGCTTCCTTATTGAGTCCATC
AACAGGTATCTGGGCCCGAGCTGGGCAGAGTGGTTAGAGTGGCCAAACCG
GAGCTTGAGTGAACCTAGTCAGTTAGGTGAAATATCGTAATTCCCCTGTG
ACCGGCGATTGAGCATGCAACGATCATTGGAGAGCTTACGCCAGACGTTA
AAGATTTTGGTGACTGCGCTGGTAGCGATTCTCGACATACATACCCACTC
TCATCTTGTGGTTCGGAGGTGATATTCTTTTCCATGGAGACTGTACATAC
TTTCCGCGTCATTCACAGCCCTATCGTATGACCCC back to topCoding sequence (CDS) from alignment at KZ851916.1:474590..476224+ >M747DRAFT_323457-T1 ID=M747DRAFT_323457-T1|Name=M747DRAFT_323457-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2334bp|location=Sequence derived from alignment at KZ851916.1:474590..476224+ (Aspergillus niger ATCC 13496)
ATGCCGCGTAGAGCACATAAGAAGTCGCGCAATGGCTGCTTTGAATGTAA
GCGGCGCCACATTAAATGCGACGAGAAACAACCGATATGTTCCAACTGTC
GGTCTTCGGAACGCTCCTGCGAATACGCGGATCCGTTCATACGGGCGGCC
AGTTCGCAGTCAAGCAAGTCATCGATCCCGTCACCTGCTGGCACGGTGAC
GGATGAACTACCCCTGCGTTCGCCTGCACATCCCTCTTCTCTTTCTGAAA
GTCCCCCAGTCAACATGCTTCACGCTGAGCTGTTCTTCAACTTGACAAAT
TACACCCTTTGCGGCCTCAGCGAAGGGGAGACTGGATGGATTGGTACCCC
GGACGTGATGCGAATTGTTGTCTCGACGCCCTATCTCATCAATCAAGTCC
TTGCACTAAGTGCTCTACACTTGAGTGTAGCGCGTCCAGGAAATAGAGAG
TGGTATCGGCGCCATGCAGCCCATCTACAAACGCATGCATTGGAGATTTA
CAATCAAAGGAGACTCGAATTTGACCAGGAGAGCAGTGTCCCACTATTTC
TTTTCTCCTGCATCCTCGGCATGCATACTCTCTGTGACGTCTTGGTTCAC
CGTGAAGACACCAGTTTCGATAGATTTCTGGAACGATTCGTGCATTGCCT
GAAACTCCAACTTGGTATTCGCGTCGTGATTTCTTCGACCACGTGGCAAT
CACTACAGGAGTCAATTCTCAAGAAACCGCTTCAAGACGGAGCAATCTTG
TTCAATTGGGATACGAATCTGGGACCCGAGTGCGCAAGACTCTTGCGGCT
CATTGAAGGAGCTAAATTGGGCGATGCCATTACTTCCACCTATCGCAGTG
CGGTCCAGGCGCTGCAAAAGTCCATGAATGCAGCCATGAGAGGTTCGCTG
AAGAATATAAGCGGAGTTACGGGCTGGCCTGTCATAGTCAGCCCAGAATA
TGCCGAACATTTGGCAATGCAACGGCCCGAAGCTCTGGTAATCCTGGCTC
ATTACGCTGTGATTCTACACTGGCATCGGCACTTCTGGTTGTTTGGCGAT
GGTGGCCGCTTCCTTATTGAGTCCATCAACAGGTATCTGGGCCCGAGCTG
GGCAGAGTGGTTAGAGTGGCCAAACCGGAGCTTGAGTGAACCTAGTCAGT
TAGGTGAAATATCGTAAATGCCGCGTAGAGCACATAAGAAGTCGCGCAAT
GGCTGCTTTGAATGTAAGCGGCGCCACATTAAATGCGACGAGAAACAACC
GATATGTTCCAACTGTCGGTCTTCGGAACGCTCCTGCGAATACGCGGATC
CGTTCATACGGGCGGCCAGTTCGCAGTCAAGCAAGTCATCGATCCCGTCA
CCTGCTGGCACGGTGACGGATGAACTACCCCTGCGTTCGCCTGCACATCC
CTCTTCTCTTTCTGAAAGTCCCCCAGTCAACATGCTTCACGCTGAGCTGT
TCTTCAACTTGACAAATTACACCCTTTGCGGCCTCAGCGAAGGGGAGACT
GGATGGATTGGTACCCCGGACGTGATGCGAATTGTTGTCTCGACGCCCTA
TCTCATCAATCAAGTCCTTGCACTAAGTGCTCTACACTTGAGTGTAGCGC
GTCCAGGAAATAGAGAGTGGTATCGGCGCCATGCAGCCCATCTACAAACG
CATGCATTGGAGATTTACAATCAAAGGAGACTCGAATTTGACCAGGAGAG
CAGTGTCCCACTATTTCTTTTCTCCTGCATCCTCGGCATGCATACTCTCT
GTGACGTCTTGGTTCACCGTGAAGACACCAGTTTCGATAGATTTCTGGAA
CGATTCGTGCATTGCCTGAAACTCCAACTTGGTATTCGCGTCGTGATTTC
TTCGACCACGTGGCAATCACTACAGGAGTCAATTCTCAAGAAACCGCTTC
AAGACGGAGCAATCTTGTTCAATTGGGATACGAATCTGGGACCCGAGTGC
GCAAGACTCTTGCGGCTCATTGAAGGAGCTAAATTGGGCGATGCCATTAC
TTCCACCTATCGCAGTGCGGTCCAGGCGCTGCAAAAGTCCATGAATGCAG
CCATGAGAGGTTCGCTGAAGAATATAAGCGGAGTTACGGGCTGGCCTGTC
ATAGTCAGCCCAGAATATGCCGAACATTTGGCAATGCAACGGCCCGAAGC
TCTGGTAATCCTGGCTCATTACGCTGTGATTCTACACTGGCATCGGCACT
TCTGGTTGTTTGGCGATGGTGGCCGCTTCCTTATTGAGTCCATCAACAGG
TATCTGGGCCCGAGCTGGGCAGAGTGGTTAGAGTGGCCAAACCGGAGCTT
GAGTGAACCTAGTCAGTTAGGTGAAATATCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851916.1 | supercontig | KZ851916.1:474590..476224 + |
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