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M747DRAFT_324239-T1, M747DRAFT_324239-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_324239-T1
Unique NameM747DRAFT_324239-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851923.1:301749..302765-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_324239-T1 ID=M747DRAFT_324239-T1|Name=M747DRAFT_324239-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1017bp|location=Sequence derived from alignment at KZ851923.1:301749..302765- (Aspergillus niger ATCC 13496)
ATGTGTACGTGAATGACCCTGAAATCGGATTTCCAACCCTGCCTATTTGA
TTTCCGTCGCTGTTCGTTTTTTGCCGGTCATTTTTGGAGGAAATATTCAT
CGCTGGGGTTTTGGAGAAAAGAGAAAAGGACTATCATCGCGGATATAGAC
GGCAGCAACAGCAGCGACGGAATCATTGAATATTTTTCATCATCATCATG
GCAACAACCGATTTCTTAAGACAGAAAGGCTGACTTGCGGTTTTTGGAAT
TTTTTAGCGCTCGTGTCCGGCGAGAAGACGAACTTCCAGTACATTCTGCG
TCTGCTCAACACCAATGTTGACGGCAAGCAGAAGATCATGTACGCCTTGA
CCCAGATCAAGGGTGTTGGTCGCCGTTACTCCAACTTGGTCTGCAAGAAG
GCCGACGTTGACCTCAGCAAGCGGTACGTTTACACTACACTACATTTCTC
GATGGTTCGAATGCGAGGCAGGGGATAAAAGAGTGGGAGTGGATTCCACG
GACAAGAGAAGGGAGAAGAGCAAACACCACGAGGTTGAAAGGGCAGGAGA
TACAAGAACAGCCAAGTTGACTTTCCTACTTTCTACAGCGCTGGTGAACT
CACCACCGAAGAGCTCGAGCGTATCGTCACCATCCTCCAGAGCCCCACCC
AGTACAAGATCCCCACCTGGTTCCTCAACAGACAGCGCGACATCACCGAT
GGCAAGGACTCCCAGGTCGTCTCCAACTCCCTCGACAGCAAGATCCGTGA
GGATCTCGAGCGCCTGAAGAAGATCCGCTCCCACCGTGGTCTCCGTCACT
ACTGGGGTCTCCGTGTCCGCGGTCAGCACACCAAGACCACCGGTCGTCGT
GGACGCACCGTCGGTGTCAGCAAGAAGAAGAACTAAAAAAACAATCATCG
GGGTCATATCATCTGCGTTTGTTTCTTCGTACTTGCTGGAGTGGATCGTG
GGAAGGATGGATTCCTTTCGTGTATCTTGGTGTGGATTTTTTTAACGAAA
TCTTCCCTGGGACCGGG
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Coding sequence (CDS) from alignment at KZ851923.1:301749..302765-

>M747DRAFT_324239-T1 ID=M747DRAFT_324239-T1|Name=M747DRAFT_324239-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1404bp|location=Sequence derived from alignment at KZ851923.1:301749..302765- (Aspergillus niger ATCC 13496)
CGCTGGTGAACTCACCACCGAAGAGCTCGAGCGTATCGTCACCATCCTCC
AGAGCCCCACCCAGTACAAGATCCCCACCTGGTTCCTCAACAGACAGCGC
GACATCACCGATGGCAAGGACTCCCAGGTCGTCTCCAACTCCCTCGACAG
CAAGATCCGTGAGGATCTCGAGCGCCTGAAGAAGATCCGCTCCCACCGTG
GTCTCCGTCACTACTGGGGTCTCCGTGTCCGCGGTCAGCACACCAAGACC
ACCGGTCGTCGTGGACGCACCGTCGGTGTCAGCAAGAAGAAGAACTAACG
CTCGTGTCCGGCGAGAAGACGAACTTCCAGTACATTCTGCGTCTGCTCAA
CACCAATGTTGACGGCAAGCAGAAGATCATGTACGCCTTGACCCAGATCA
AGGGTGTTGGTCGCCGTTACTCCAACTTGGTCTGCAAGAAGGCCGACGTT
GACCTCAGCAAGCGATGTCGCTGGTGAACTCACCACCGAAGAGCTCGAGC
GTATCGTCACCATCCTCCAGAGCCCCACCCAGTACAAGATCCCCACCTGG
TTCCTCAACAGACAGCGCGACATCACCGATGGCAAGGACTCCCAGGTCGT
CTCCAACTCCCTCGACAGCAAGATCCGTGAGGATCTCGAGCGCCTGAAGA
AGATCCGCTCCCACCGTGGTCTCCGTCACTACTGGGGTCTCCGTGTCCGC
GGTCAGCACACCAAGACCACCGGTCGTCGTGGACGCACCGTCGGTGTCAG
CAAGAAGAAGAACTAACGCTCGTGTCCGGCGAGAAGACGAACTTCCAGTA
CATTCTGCGTCTGCTCAACACCAATGTTGACGGCAAGCAGAAGATCATGT
ACGCCTTGACCCAGATCAAGGGTGTTGGTCGCCGTTACTCCAACTTGGTC
TGCAAGAAGGCCGACGTTGACCTCAGCAAGCGATGTCGCTGGTGAACTCA
CCACCGAAGAGCTCGAGCGTATCGTCACCATCCTCCAGAGCCCCACCCAG
TACAAGATCCCCACCTGGTTCCTCAACAGACAGCGCGACATCACCGATGG
CAAGGACTCCCAGGTCGTCTCCAACTCCCTCGACAGCAAGATCCGTGAGG
ATCTCGAGCGCCTGAAGAAGATCCGCTCCCACCGTGGTCTCCGTCACTAC
TGGGGTCTCCGTGTCCGCGGTCAGCACACCAAGACCACCGGTCGTCGTGG
ACGCACCGTCGGTGTCAGCAAGAAGAAGAACTAACGCTCGTGTCCGGCGA
GAAGACGAACTTCCAGTACATTCTGCGTCTGCTCAACACCAATGTTGACG
GCAAGCAGAAGATCATGTACGCCTTGACCCAGATCAAGGGTGTTGGTCGC
CGTTACTCCAACTTGGTCTGCAAGAAGGCCGACGTTGACCTCAGCAAGCG
ATGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS18M747DRAFT_324239Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_324239-T1M747DRAFT_324239-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_324239-T1.cdsM747DRAFT_324239-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_324239-T1.utr3p1M747DRAFT_324239-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_324239-T1.exon3M747DRAFT_324239-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_324239-T1.exon2M747DRAFT_324239-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_324239-T1.exon1M747DRAFT_324239-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteBUSCO:EOG09264YEG
DBxrefInterPro:IPR010979
DBxrefInterPro:IPR018269
DBxrefInterPro:IPR001892
DBxrefInterPro:IPR027437
DBxrefPFAM:PF00416
Productribosomal 40S subunit protein S18B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851923.1supercontigKZ851923.1:301749..302765 -
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