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M747DRAFT_324584-T1, M747DRAFT_324584-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_324584-T1
Unique NameM747DRAFT_324584-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851926.1:449171..450218-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_324584-T1 ID=M747DRAFT_324584-T1|Name=M747DRAFT_324584-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1048bp|location=Sequence derived from alignment at KZ851926.1:449171..450218- (Aspergillus niger ATCC 13496)
ATGGGTATGTTCAAATCGACGTGGTGATATATTCATTTGCTGAAGAATCT
CGCGGGTTGCGACTTTTTTTTTTGGCTCAACACCATGGACATTTCCTGTT
TTCACTTGGCAAATACTGATTTTGGGATACAGGTATCGACTTGGACCGCC
ACCATGTGCGCGGCACCCATCGCAAGGCGCCCAAGAGCGAGAACGTCTAC
CTGCAAGTCTTGGTGAAGCTCTACCGATTCCTCGCCCGTATGTCTCCGTC
TTCTGAGTGCAGCCGATTTCAGCAATGGGAAACTGATTGGTGGTGGTATT
TTTACAGGTCGTACGGAATCCAACTTCAACAAGGTCGTCTTGCGCCGCCT
TTTCATGTCCAGGATCAATCGCCCCCCCGTTTCGCTCTCGCGCATTGTAT
CCAATGTGACCGACTCCCACAAGGGCAAGACTATCGTTGTGATCGGCACC
ATCACTGACGACAACCGTCTTCTGACTGTCCCGAAGCTGTCTATTGCAGC
ACTTCGTTTCACGGCTACTGCTCGGGCCAGGATTGAGAAGGCTGGTGGTG
AGGTCTTGACTTTGGACCAGCTCGCTCTGCGTGCCCCTACTGGAGCAAAC
ACTCTCCTTCTCCGCGGACCTAAGAATGCTCGGGAGGCAGTGAAGCACTT
CGGTTTCGGCCCCCACAGCCACAAGGCATGTTATATACTCTTCGCGCAAT
ATATGGTTTGCATAACTAACCTTGAAACAGAAACCCTACGTTCGCAGCAA
GGGACGTAAGTTCGAGAGAGCCCGTGGACGCAGAAGGTCTCGCGGTTTCA
AGGTGTAAGGAACGCTGGTTAAATATTTTCCGTTTCTTGTGTCTGGTAGC
GGTTCATCGTGCTGGTGAAGACGACTTGCGGAATCATGCATACCCGGGAG
TCTTCCTTATCGGCCGTTGCTCCAACTTTTTTAGAACGCCCGATGCCAGA
CCAAATATTATGAGGGTTCCAGGCGAGCTTAACTGGATGAAAATGAAAAT
GGAGTTATATCATTGAATACCTATAAATTTCTCTATTTCTTCTTTTCT
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Coding sequence (CDS) from alignment at KZ851926.1:449171..450218-

>M747DRAFT_324584-T1 ID=M747DRAFT_324584-T1|Name=M747DRAFT_324584-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2220bp|location=Sequence derived from alignment at KZ851926.1:449171..450218- (Aspergillus niger ATCC 13496)
AAACCCTACGTTCGCAGCAAGGGACGTAAGTTCGAGAGAGCCCGTGGACG
CAGAAGGTCTCGCGGTTTCAAGGTGTAAGTCGTACGGAATCCAACTTCAA
CAAGGTCGTCTTGCGCCGCCTTTTCATGTCCAGGATCAATCGCCCCCCCG
TTTCGCTCTCGCGCATTGTATCCAATGTGACCGACTCCCACAAGGGCAAG
ACTATCGTTGTGATCGGCACCATCACTGACGACAACCGTCTTCTGACTGT
CCCGAAGCTGTCTATTGCAGCACTTCGTTTCACGGCTACTGCTCGGGCCA
GGATTGAGAAGGCTGGTGGTGAGGTCTTGACTTTGGACCAGCTCGCTCTG
CGTGCCCCTACTGGAGCAAACACTCTCCTTCTCCGCGGACCTAAGAATGC
TCGGGAGGCAGTGAAGCACTTCGGTTTCGGCCCCCACAGCCACAAGGTAT
CGACTTGGACCGCCACCATGTGCGCGGCACCCATCGCAAGGCGCCCAAGA
GCGAGAACGTCTACCTGCAAGTCTTGGTGAAGCTCTACCGATTCCTCGCC
CATGGAAACCCTACGTTCGCAGCAAGGGACGTAAGTTCGAGAGAGCCCGT
GGACGCAGAAGGTCTCGCGGTTTCAAGGTGTAAGTCGTACGGAATCCAAC
TTCAACAAGGTCGTCTTGCGCCGCCTTTTCATGTCCAGGATCAATCGCCC
CCCCGTTTCGCTCTCGCGCATTGTATCCAATGTGACCGACTCCCACAAGG
GCAAGACTATCGTTGTGATCGGCACCATCACTGACGACAACCGTCTTCTG
ACTGTCCCGAAGCTGTCTATTGCAGCACTTCGTTTCACGGCTACTGCTCG
GGCCAGGATTGAGAAGGCTGGTGGTGAGGTCTTGACTTTGGACCAGCTCG
CTCTGCGTGCCCCTACTGGAGCAAACACTCTCCTTCTCCGCGGACCTAAG
AATGCTCGGGAGGCAGTGAAGCACTTCGGTTTCGGCCCCCACAGCCACAA
GGTATCGACTTGGACCGCCACCATGTGCGCGGCACCCATCGCAAGGCGCC
CAAGAGCGAGAACGTCTACCTGCAAGTCTTGGTGAAGCTCTACCGATTCC
TCGCCCATGGAAACCCTACGTTCGCAGCAAGGGACGTAAGTTCGAGAGAG
CCCGTGGACGCAGAAGGTCTCGCGGTTTCAAGGTGTAAGTCGTACGGAAT
CCAACTTCAACAAGGTCGTCTTGCGCCGCCTTTTCATGTCCAGGATCAAT
CGCCCCCCCGTTTCGCTCTCGCGCATTGTATCCAATGTGACCGACTCCCA
CAAGGGCAAGACTATCGTTGTGATCGGCACCATCACTGACGACAACCGTC
TTCTGACTGTCCCGAAGCTGTCTATTGCAGCACTTCGTTTCACGGCTACT
GCTCGGGCCAGGATTGAGAAGGCTGGTGGTGAGGTCTTGACTTTGGACCA
GCTCGCTCTGCGTGCCCCTACTGGAGCAAACACTCTCCTTCTCCGCGGAC
CTAAGAATGCTCGGGAGGCAGTGAAGCACTTCGGTTTCGGCCCCCACAGC
CACAAGGTATCGACTTGGACCGCCACCATGTGCGCGGCACCCATCGCAAG
GCGCCCAAGAGCGAGAACGTCTACCTGCAAGTCTTGGTGAAGCTCTACCG
ATTCCTCGCCCATGGAAACCCTACGTTCGCAGCAAGGGACGTAAGTTCGA
GAGAGCCCGTGGACGCAGAAGGTCTCGCGGTTTCAAGGTGTAAGTCGTAC
GGAATCCAACTTCAACAAGGTCGTCTTGCGCCGCCTTTTCATGTCCAGGA
TCAATCGCCCCCCCGTTTCGCTCTCGCGCATTGTATCCAATGTGACCGAC
TCCCACAAGGGCAAGACTATCGTTGTGATCGGCACCATCACTGACGACAA
CCGTCTTCTGACTGTCCCGAAGCTGTCTATTGCAGCACTTCGTTTCACGG
CTACTGCTCGGGCCAGGATTGAGAAGGCTGGTGGTGAGGTCTTGACTTTG
GACCAGCTCGCTCTGCGTGCCCCTACTGGAGCAAACACTCTCCTTCTCCG
CGGACCTAAGAATGCTCGGGAGGCAGTGAAGCACTTCGGTTTCGGCCCCC
ACAGCCACAAGGTATCGACTTGGACCGCCACCATGTGCGCGGCACCCATC
GCAAGGCGCCCAAGAGCGAGAACGTCTACCTGCAAGTCTTGGTGAAGCTC
TACCGATTCCTCGCCCATGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_324584M747DRAFT_324584Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_324584-T1M747DRAFT_324584-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_324584-T1.cdsM747DRAFT_324584-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_324584-T1.utr3p1M747DRAFT_324584-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_324584-T1.exon4M747DRAFT_324584-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_324584-T1.exon3M747DRAFT_324584-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_324584-T1.exon2M747DRAFT_324584-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_324584-T1.exon1M747DRAFT_324584-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
DBxrefInterPro:IPR036227
DBxrefInterPro:IPR021132
DBxrefInterPro:IPR021131
DBxrefPFAM:PF00828
DBxrefPFAM:PF17135
Productribosomal protein L18e
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851926.1supercontigKZ851926.1:449171..450218 -
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