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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851947.1:192719..194343+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_326041-T1 ID=M747DRAFT_326041-T1|Name=M747DRAFT_326041-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1625bp|location=Sequence derived from alignment at KZ851947.1:192719..194343+ (Aspergillus niger ATCC 13496)
GCTGGATTTCTGGGTTGCAAAGGAACTGCTGTAGTCGCTGCTTGCTGAAC
CCTTCCAGAGCAATCATGTCAGCCGCTACCGATAAGGCACGCTTCTTTCT
GGAGAAGTCGGTCCCTGAGCTCAAGGAGTTTGAGCGGAAGAAAATCTTCT
CCAAGGTAAATTGGTGCCCATGATCATTATCTACCCACATCGATGCGCTT
AGGAAACTGACATGCCGTTTGATCTGCCTGCAGGAGGAAATTACAGCCAT
CATCAAGAAACGGTCCGATTTTGAGCACAAGCTGAATGCACGTGGCGCCC
TGCCTGTTGACTTCGTCCGATATGCGCAATACGAGATGAACCTAGACACC
CTGCGCCGGAAGAGGGTGAAGCGGTTGGGAATCAGATCGGCAGGATACAC
TGGGCAAAGGCGCATCTTCTTCATCCTTGACCGCGCAACTCGCAAGTTTC
ATGGTGATGTGGGCTTGTGGGTGCAGTACCTCGAATACGCGAAACAACAG
AAAGCCTACAAAAAGGTCTCGACCATCCTTACGGACGCCTTGCGGTTACA
TCCCGCCAACGTCGACTTGTGGCTATATGCTGCGCAGTACTCTGTGGATG
AGCATGCGGATATGACACAATCTAGGGGTTACATGCAGCGCGGTTTGCGC
TTCTGCAAAAGCTCCAAGAAGCTGTGGCTCCACTATGCCAAACTGGAATT
GATATATATCGCCAAGCTGGTTGCTCGACAGCGGATCTTGGGTCTCGATA
AGCCGATCGAAGCCCCGAAGCCAGCGCAGGAGGACGATTTAGATGCCGAC
ATGATTGCTATGCCCAAGATCACTGGAGAAGATATCAACCCCGGCGCTGG
AGAGGATGGCGGTGTGGATCAAGTGGCTTTGGACAACCTTGCCAACACCC
CAGCCCTGAGTGGTGCTATCCCTCTCGCCATCTTCGATACGGCCATGAAG
AACTTCGAAAATGACGACCGTTTCGGTCATGAGTTCTACGATATGGCGGT
CGAGTTCGACGACCTGCCCTGTCTGCACAAAATTCTCGGCCATGTGGTCG
ACGTGATGCAGCAGACCAAGCCAAACAGTCCTCATACGCAAATTTGCTAC
ATCAAATTCCCCACCGCTGGACTCCGGGTTACTTCACCCGAATTCCCACG
TGCGTTTAGTGCGTCATTTGCCCGTCTCAAGGAGTACCGGAATAACCCCA
ACGTCGCCAAGGAGATCGTCAGCTGGCTACAGCCCCTTGAGAAGACAGAA
GGCGTGGATGCCTCCCTCCAAAAGGCGATTTCGGCCACTATCCGTAATGC
GGAACGCACTGTACAGGAAGCATAGAGCTTACATTTTTTACTAAATCATT
CATCGGCGTTTATCGGGCTTTTTCCGTCGCAAGCTTAATGGGCAATGAGA
ATGAGGGAAAGGTCCTCTTGGTTATTAGGTGATGAAAAGTTAGCATGTTT
GTTAGTCGTCATAACTACCCCGTCGGCTGCTCTTTTTGCTGCTGTGCAAT
TTCTTCGACTTGATGCGGGCTTCGTTTGCAGCTTTCTTTCTGCGCTAGAT
CAGTCCGAGGTTCGCATGTTCCTCAAAGTGGATCCTAAATACCCCGAGGA
GGAAATACATACAATTTTTGTACCT back to topCoding sequence (CDS) from alignment at KZ851947.1:192719..194343+ >M747DRAFT_326041-T1 ID=M747DRAFT_326041-T1|Name=M747DRAFT_326041-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2364bp|location=Sequence derived from alignment at KZ851947.1:192719..194343+ (Aspergillus niger ATCC 13496)
ATGTCAGCCGCTACCGATAAGGCACGCTTCTTTCTGGAGAAGTCGGTCCC
TGAGCTCAAGGAGTTTGAGCGGAAGAAAATCTTCTCCAAGGAGGAAATTA
CAGCCATCATCAAGAAACGGTCCGATTTTGAGCACAAGCTGAATGCACGT
GGCGCCCTGCCTGTTGACTTCGTCCGATATGCGCAATACGAGATGAACCT
AGACACCCTGCGCCGGAAGAGGGTGAAGCGGTTGGGAATCAGATCGGCAG
GATACACTGGGCAAAGGCGCATCTTCTTCATCCTTGACCGCGCAACTCGC
AAGTTTCATGGTGATGTGGGCTTGTGGGTGCAGTACCTCGAATACGCGAA
ACAACAGAAAGCCTACAAAAAGGTCTCGACCATCCTTACGGACGCCTTGC
GGTTACATCCCGCCAACGTCGACTTGTGGCTATATGCTGCGCAGTACTCT
GTGGATGAGCATGCGGATATGACACAATCTAGGGGTTACATGCAGCGCGG
TTTGCGCTTCTGCAAAAGCTCCAAGAAGCTGTGGCTCCACTATGCCAAAC
TGGAATTGATATATATCGCCAAGCTGGTTGCTCGACAGCGGATCTTGGGT
CTCGATAAGCCGATCGAAGCCCCGAAGCCAGCGCAGGAGGACGATTTAGA
TGCCGACATGATTGCTATGCCCAAGATCACTGGAGAAGATATCAACCCCG
GCGCTGGAGAGGATGGCGGTGTGGATCAAGTGGCTTTGGACAACCTTGCC
AACACCCCAGCCCTGAGTGGTGCTATCCCTCTCGCCATCTTCGATACGGC
CATGAAGAACTTCGAAAATGACGACCGTTTCGGTCATGAGTTCTACGATA
TGGCGGTCGAGTTCGACGACCTGCCCTGTCTGCACAAAATTCTCGGCCAT
GTGGTCGACGTGATGCAGCAGACCAAGCCAAACAGTCCTCATACGCAAAT
TTGCTACATCAAATTCCCCACCGCTGGACTCCGGGTTACTTCACCCGAAT
TCCCACGTGCGTTTAGTGCGTCATTTGCCCGTCTCAAGGAGTACCGGAAT
AACCCCAACGTCGCCAAGGAGATCGTCAGCTGGCTACAGCCCCTTGAGAA
GACAGAAGGCGTGGATGCCTCCCTCCAAAAGGCGATTTCGGCCACTATCC
GTAATGCGGAACGCACTGTACAGGAAGCATAGATGTCAGCCGCTACCGAT
AAGGCACGCTTCTTTCTGGAGAAGTCGGTCCCTGAGCTCAAGGAGTTTGA
GCGGAAGAAAATCTTCTCCAAGGAGGAAATTACAGCCATCATCAAGAAAC
GGTCCGATTTTGAGCACAAGCTGAATGCACGTGGCGCCCTGCCTGTTGAC
TTCGTCCGATATGCGCAATACGAGATGAACCTAGACACCCTGCGCCGGAA
GAGGGTGAAGCGGTTGGGAATCAGATCGGCAGGATACACTGGGCAAAGGC
GCATCTTCTTCATCCTTGACCGCGCAACTCGCAAGTTTCATGGTGATGTG
GGCTTGTGGGTGCAGTACCTCGAATACGCGAAACAACAGAAAGCCTACAA
AAAGGTCTCGACCATCCTTACGGACGCCTTGCGGTTACATCCCGCCAACG
TCGACTTGTGGCTATATGCTGCGCAGTACTCTGTGGATGAGCATGCGGAT
ATGACACAATCTAGGGGTTACATGCAGCGCGGTTTGCGCTTCTGCAAAAG
CTCCAAGAAGCTGTGGCTCCACTATGCCAAACTGGAATTGATATATATCG
CCAAGCTGGTTGCTCGACAGCGGATCTTGGGTCTCGATAAGCCGATCGAA
GCCCCGAAGCCAGCGCAGGAGGACGATTTAGATGCCGACATGATTGCTAT
GCCCAAGATCACTGGAGAAGATATCAACCCCGGCGCTGGAGAGGATGGCG
GTGTGGATCAAGTGGCTTTGGACAACCTTGCCAACACCCCAGCCCTGAGT
GGTGCTATCCCTCTCGCCATCTTCGATACGGCCATGAAGAACTTCGAAAA
TGACGACCGTTTCGGTCATGAGTTCTACGATATGGCGGTCGAGTTCGACG
ACCTGCCCTGTCTGCACAAAATTCTCGGCCATGTGGTCGACGTGATGCAG
CAGACCAAGCCAAACAGTCCTCATACGCAAATTTGCTACATCAAATTCCC
CACCGCTGGACTCCGGGTTACTTCACCCGAATTCCCACGTGCGTTTAGTG
CGTCATTTGCCCGTCTCAAGGAGTACCGGAATAACCCCAACGTCGCCAAG
GAGATCGTCAGCTGGCTACAGCCCCTTGAGAAGACAGAAGGCGTGGATGC
CTCCCTCCAAAAGGCGATTTCGGCCACTATCCGTAATGCGGAACGCACTG
TACAGGAAGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0030515 | snoRNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR013949 |
| DBxref | InterPro:IPR003107 |
| DBxref | PFAM:PF08640 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851947.1 | supercontig | KZ851947.1:192719..194343 + |
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