You are here

Home

M747DRAFT_326737-T1, M747DRAFT_326737-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_326737-T1
Unique NameM747DRAFT_326737-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851965.1:3783..5369-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_326737-T1 ID=M747DRAFT_326737-T1|Name=M747DRAFT_326737-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1587bp|location=Sequence derived from alignment at KZ851965.1:3783..5369- (Aspergillus niger ATCC 13496)
GCTGCCTCCGCTCCAAGCTCGTAACTGCGTGCTAGAATGTCCTGATCCTA
CGGAGTTACAATTGATTATCTTTACATCTTTCACAGTCGCCCAGCATCTA
CCCGCTGGGGACAAGTACACGCATCATGCAGTTCGCTCTGCCTCCGCGGA
GGACTCCGATAACCCCTCCGTACGCTCGCTCGTCGCGAATCTCACTCCAG
CGCAGGAAACAGCTCAAAGCTGTGGCCATTCTGGGCTTCGCCCTGCTCAC
CGTCTTCTTCCTTCTTTCCCAGTTTTTCTACACAAGTACAGGGGCCCCGG
CCGTACCAGCAGGAACATCCAGCATCGTCGTCGTCACCGTTCTAGACAGG
ACGGCTTGGAGTAACGAGTACATCCAGAAGATCGTCAAGAACAGAGAGGA
CTATGCTAAGCGACATGGTAAGGCGACAGCAACCCAGTCACTTTCCTCGT
GTCCAGTAACTCTTCTAATGTCTCACAATTGTGATTCAGGCTATACGAAC
TTCTTTGCCAACGTTTCCGACTATGAAACCGTCCTCGATAACGCCCCGAA
GTCCTGGGCCGTCCTCCCAGCCCTCCGTCACGCGATGGCCTCCAACCCGT
ACTCGAAGTACTTTTTCCACCTAGATGCTCACGCCCTAATAATGAACCCG
AGCAAATCACTTGAATCGCACGTCCTCGACAAGGACCGTCTCGAATCCCT
CATGCTCAAGGACGTCTCCGTCGTGCCTCCCGATAGCATCATCAAGACGT
TTTCGCATATACAGGCTCAAGATGTCGATCTCATTATGACCACCGATGCG
GAGGATTTGAGCTCCGGTAGCTTCCTCCTTCGACAGGGTGATTTTGCCAA
ATACTTCCTCGACTTCTGGTTCGACCCTCTGTACATTAGCTATAACTTTG
CAAAGGCCGAGACCCACGTTCTGGTAAGTGAGGAGACACATTACGCTTCT
ATCTTTTTAGCTTTTCTATTTATACGCCGGACACCTCTAGTCGGATGTTC
GCCTTATCAAATTCGGTTCTTTATTTTTTGCTTTTGCTTCATGATTTCCT
GCGTCACCAGACTAAGTAACTAACCTACGTCATCAATTGCTGTCCAGGAT
CACATTGTGCAATGGCACCCAACTATCTTGGCCAGATTGGCTCTGGTTCC
ACAGCGGACCATCAATGGGTACAGCAAGGATTCAAACGGGGCTGGCGTGG
ACGGCGTCTATAAGGACGGTGACTTCGTCATTCGGTTCCTTGGCTGTGAC
ACCGACACGAAGCGGAGTTGCGAGAAGGAAATGGAGCCGTATTATCGGCT
TTGGGCGGGAAAGATGAAGAATGAGTAACCTCCTTCTCTCGTGTCTGTCT
TCTCCCCTCTCATTTTCGCTGTTCCATAATGTAATGCCCATATTTGCTTG
GGGGAGTTTGGGTATGATTTCATTTCCATTGGTGTTGGGAGTTTATTTGA
CAATTTGTCTTCGGACTTTGGTATTGTGATATTGGTCCATAGAGAAGCCA
GCGCATTCATTCCAATGCTGCATGAAAATTACCTACTACCTCGCAACCCA
ATAGCATTATTGCTCAAATTAAACATGATTATTATTC
back to top

Coding sequence (CDS) from alignment at KZ851965.1:3783..5369-

>M747DRAFT_326737-T1 ID=M747DRAFT_326737-T1|Name=M747DRAFT_326737-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2871bp|location=Sequence derived from alignment at KZ851965.1:3783..5369- (Aspergillus niger ATCC 13496)
GATCACATTGTGCAATGGCACCCAACTATCTTGGCCAGATTGGCTCTGGT
TCCACAGCGGACCATCAATGGGTACAGCAAGGATTCAAACGGGGCTGGCG
TGGACGGCGTCTATAAGGACGGTGACTTCGTCATTCGGTTCCTTGGCTGT
GACACCGACACGAAGCGGAGTTGCGAGAAGGAAATGGAGCCGTATTATCG
GCTTTGGGCGGGAAAGATGAAGAATGAGTAAGCTATACGAACTTCTTTGC
CAACGTTTCCGACTATGAAACCGTCCTCGATAACGCCCCGAAGTCCTGGG
CCGTCCTCCCAGCCCTCCGTCACGCGATGGCCTCCAACCCGTACTCGAAG
TACTTTTTCCACCTAGATGCTCACGCCCTAATAATGAACCCGAGCAAATC
ACTTGAATCGCACGTCCTCGACAAGGACCGTCTCGAATCCCTCATGCTCA
AGGACGTCTCCGTCGTGCCTCCCGATAGCATCATCAAGACGTTTTCGCAT
ATACAGGCTCAAGATGTCGATCTCATTATGACCACCGATGCGGAGGATTT
GAGCTCCGGTAGCTTCCTCCTTCGACAGGGTGATTTTGCCAAATACTTCC
TCGACTTCTGGTTCGACCCTCTGTACATTAGCTATAACTTTGCAAAGGCC
GAGACCCACGTTCTGATGCAGTTCGCTCTGCCTCCGCGGAGGACTCCGAT
AACCCCTCCGTACGCTCGCTCGTCGCGAATCTCACTCCAGCGCAGGAAAC
AGCTCAAAGCTGTGGCCATTCTGGGCTTCGCCCTGCTCACCGTCTTCTTC
CTTCTTTCCCAGTTTTTCTACACAAGTACAGGGGCCCCGGCCGTACCAGC
AGGAACATCCAGCATCGTCGTCGTCACCGTTCTAGACAGGACGGCTTGGA
GTAACGAGTACATCCAGAAGATCGTCAAGAACAGAGAGGACTATGCTAAG
CGACATGGATCACATTGTGCAATGGCACCCAACTATCTTGGCCAGATTGG
CTCTGGTTCCACAGCGGACCATCAATGGGTACAGCAAGGATTCAAACGGG
GCTGGCGTGGACGGCGTCTATAAGGACGGTGACTTCGTCATTCGGTTCCT
TGGCTGTGACACCGACACGAAGCGGAGTTGCGAGAAGGAAATGGAGCCGT
ATTATCGGCTTTGGGCGGGAAAGATGAAGAATGAGTAAGCTATACGAACT
TCTTTGCCAACGTTTCCGACTATGAAACCGTCCTCGATAACGCCCCGAAG
TCCTGGGCCGTCCTCCCAGCCCTCCGTCACGCGATGGCCTCCAACCCGTA
CTCGAAGTACTTTTTCCACCTAGATGCTCACGCCCTAATAATGAACCCGA
GCAAATCACTTGAATCGCACGTCCTCGACAAGGACCGTCTCGAATCCCTC
ATGCTCAAGGACGTCTCCGTCGTGCCTCCCGATAGCATCATCAAGACGTT
TTCGCATATACAGGCTCAAGATGTCGATCTCATTATGACCACCGATGCGG
AGGATTTGAGCTCCGGTAGCTTCCTCCTTCGACAGGGTGATTTTGCCAAA
TACTTCCTCGACTTCTGGTTCGACCCTCTGTACATTAGCTATAACTTTGC
AAAGGCCGAGACCCACGTTCTGATGCAGTTCGCTCTGCCTCCGCGGAGGA
CTCCGATAACCCCTCCGTACGCTCGCTCGTCGCGAATCTCACTCCAGCGC
AGGAAACAGCTCAAAGCTGTGGCCATTCTGGGCTTCGCCCTGCTCACCGT
CTTCTTCCTTCTTTCCCAGTTTTTCTACACAAGTACAGGGGCCCCGGCCG
TACCAGCAGGAACATCCAGCATCGTCGTCGTCACCGTTCTAGACAGGACG
GCTTGGAGTAACGAGTACATCCAGAAGATCGTCAAGAACAGAGAGGACTA
TGCTAAGCGACATGGATCACATTGTGCAATGGCACCCAACTATCTTGGCC
AGATTGGCTCTGGTTCCACAGCGGACCATCAATGGGTACAGCAAGGATTC
AAACGGGGCTGGCGTGGACGGCGTCTATAAGGACGGTGACTTCGTCATTC
GGTTCCTTGGCTGTGACACCGACACGAAGCGGAGTTGCGAGAAGGAAATG
GAGCCGTATTATCGGCTTTGGGCGGGAAAGATGAAGAATGAGTAAGCTAT
ACGAACTTCTTTGCCAACGTTTCCGACTATGAAACCGTCCTCGATAACGC
CCCGAAGTCCTGGGCCGTCCTCCCAGCCCTCCGTCACGCGATGGCCTCCA
ACCCGTACTCGAAGTACTTTTTCCACCTAGATGCTCACGCCCTAATAATG
AACCCGAGCAAATCACTTGAATCGCACGTCCTCGACAAGGACCGTCTCGA
ATCCCTCATGCTCAAGGACGTCTCCGTCGTGCCTCCCGATAGCATCATCA
AGACGTTTTCGCATATACAGGCTCAAGATGTCGATCTCATTATGACCACC
GATGCGGAGGATTTGAGCTCCGGTAGCTTCCTCCTTCGACAGGGTGATTT
TGCCAAATACTTCCTCGACTTCTGGTTCGACCCTCTGTACATTAGCTATA
ACTTTGCAAAGGCCGAGACCCACGTTCTGATGCAGTTCGCTCTGCCTCCG
CGGAGGACTCCGATAACCCCTCCGTACGCTCGCTCGTCGCGAATCTCACT
CCAGCGCAGGAAACAGCTCAAAGCTGTGGCCATTCTGGGCTTCGCCCTGC
TCACCGTCTTCTTCCTTCTTTCCCAGTTTTTCTACACAAGTACAGGGGCC
CCGGCCGTACCAGCAGGAACATCCAGCATCGTCGTCGTCACCGTTCTAGA
CAGGACGGCTTGGAGTAACGAGTACATCCAGAAGATCGTCAAGAACAGAG
AGGACTATGCTAAGCGACATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_326737M747DRAFT_326737Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_326737-T1M747DRAFT_326737-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_326737-T1.cdsM747DRAFT_326737-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_326737-T1.utr3p1M747DRAFT_326737-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_326737-T1.exon3M747DRAFT_326737-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_326737-T1.exon2M747DRAFT_326737-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_326737-T1.exon1M747DRAFT_326737-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_326737-T1.utr5p1M747DRAFT_326737-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteCAZy:GT34
DBxrefInterPro:IPR008630
DBxrefPFAM:PF05637
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851965.1supercontigKZ851965.1:3783..5369 -
Powered by Drupal