You are here

Home

M747DRAFT_326950-T1, M747DRAFT_326950-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_326950-T1
Unique NameM747DRAFT_326950-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851976.1:1649..2734-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_326950-T1 ID=M747DRAFT_326950-T1|Name=M747DRAFT_326950-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1086bp|location=Sequence derived from alignment at KZ851976.1:1649..2734- (Aspergillus niger ATCC 13496)
ATGACAACTGTATTTATCGGCCAGGCTGAGGATGGAAGCCACCCAGCCTG
GCCACAGGATGAAGTTACGAGTTCGTTAGTCGGACGGGTGGGGTTCTCGC
CAATCTATTCTGGGGCCGATTTATCTTCTTTTTCACTTGAGGGCTATTGC
GACCCAATGGTGATAGGGGGTAGACAAGGAGAAATCCTGGCTCCTCCTTC
TACGATAGTGACCGATACTGTGATCGGGAACAGCAGAGAACCTTCTTGGC
CGGAGCAATACCTAGACCTCATCGCACCGAACAGCCTACTGTACCTGGAA
GACTTCGCTCAAAACCAGTCACATTCTGCTAATCTCGTGGAAGCCTCGAC
TCTGACCACAGTGGGGTTGGACTCACAGGAACACTCTCTTCCAAACCAAT
CTCTATAGAGACGTGGCTTGGATGGATGCCTGAGTGATGAAGGTTACGAG
AGGACCACCGCAGCTGTGGTTGTTGGAGGACGGGCCGATTCAGGAACATA
TGTTTCGAGGTTTCAGGAAGTGCCAATGCCTTCTTATGATCACGATATTT
CACCAGAGGATGGGCTATATCACTGCCAAGATCGTGCATGCGTGGCCCAG
ACTGGCTTTTCAAGAAAATGTGATTTGCAGTAAGCTACGCCACCACTTTC
TCAATTCATCCCGCTGACTCTTCACAGAAAGCATATGCGCAGTCACGTTA
AGCCAGTTAAATGCCCCATATGTACGGTAACCAAGGCTCAGCAGGTTCAT
ATGCGCCGACATATGGAAGTGCATCACGGTGGATGGGCTCGGCAATGGTG
GCAAGTGGGAGTTGTGTGTGAATTATGCGGTAAATCATTCACAAGGAGAG
ACAATCTTCGGAGACACCACCGAAGTCAGCATGAAGATTTTAGTAGCCTC
TGTATCTGATTAAAGTTTTTCGTCTGTGGGGCCTATGCTCTGTCGAGTTT
ATGAAGGTTCTTGAATGGTATTTTAGATCCCCTCCAAGCTAACGTCTGGT
AAGAAGCAGAAGTACACTCGCCTCCATCTTGTAATTAAGGTTCTAATGAG
AATCTACGATTACGTGTTTCAATGAGAGCAGAAAAG
back to top

Coding sequence (CDS) from alignment at KZ851976.1:1649..2734-

>M747DRAFT_326950-T1 ID=M747DRAFT_326950-T1|Name=M747DRAFT_326950-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2439bp|location=Sequence derived from alignment at KZ851976.1:1649..2734- (Aspergillus niger ATCC 13496)
AAAGCATATGCGCAGTCACGTTAAGCCAGTTAAATGCCCCATATGTACGG
TAACCAAGGCTCAGCAGGTTCATATGCGCCGACATATGGAAGTGCATCAC
GGTGGATGGGCTCGGCAATGGTGGCAAGTGGGAGTTGTGTGTGAATTATG
CGGTAAATCATTCACAAGGAGAGACAATCTTCGGAGACACCACCGAAGTC
AGCATGAAGATTTTAGTAGCCTCTGTATCTGAAGACGTGGCTTGGATGGA
TGCCTGAGTGATGAAGGTTACGAGAGGACCACCGCAGCTGTGGTTGTTGG
AGGACGGGCCGATTCAGGAACATATGTTTCGAGGTTTCAGGAAGTGCCAA
TGCCTTCTTATGATCACGATATTTCACCAGAGGATGGGCTATATCACTGC
CAAGATCGTGCATGCGTGGCCCAGACTGGCTTTTCAAGAAAATGTGATTT
GCAATGACAACTGTATTTATCGGCCAGGCTGAGGATGGAAGCCACCCAGC
CTGGCCACAGGATGAAGTTACGAGTTCGTTAGTCGGACGGGTGGGGTTCT
CGCCAATCTATTCTGGGGCCGATTTATCTTCTTTTTCACTTGAGGGCTAT
TGCGACCCAATGGTGATAGGGGGTAGACAAGGAGAAATCCTGGCTCCTCC
TTCTACGATAGTGACCGATACTGTGATCGGGAACAGCAGAGAACCTTCTT
GGCCGGAGCAATACCTAGACCTCATCGCACCGAACAGCCTACTGTACCTG
GAAGACTTCGCTCAAAACCAGTCACATTCTGCTAATCTCGTGGAAGCCTC
GACTCTGACCACAAAAGCATATGCGCAGTCACGTTAAGCCAGTTAAATGC
CCCATATGTACGGTAACCAAGGCTCAGCAGGTTCATATGCGCCGACATAT
GGAAGTGCATCACGGTGGATGGGCTCGGCAATGGTGGCAAGTGGGAGTTG
TGTGTGAATTATGCGGTAAATCATTCACAAGGAGAGACAATCTTCGGAGA
CACCACCGAAGTCAGCATGAAGATTTTAGTAGCCTCTGTATCTGAAGACG
TGGCTTGGATGGATGCCTGAGTGATGAAGGTTACGAGAGGACCACCGCAG
CTGTGGTTGTTGGAGGACGGGCCGATTCAGGAACATATGTTTCGAGGTTT
CAGGAAGTGCCAATGCCTTCTTATGATCACGATATTTCACCAGAGGATGG
GCTATATCACTGCCAAGATCGTGCATGCGTGGCCCAGACTGGCTTTTCAA
GAAAATGTGATTTGCAATGACAACTGTATTTATCGGCCAGGCTGAGGATG
GAAGCCACCCAGCCTGGCCACAGGATGAAGTTACGAGTTCGTTAGTCGGA
CGGGTGGGGTTCTCGCCAATCTATTCTGGGGCCGATTTATCTTCTTTTTC
ACTTGAGGGCTATTGCGACCCAATGGTGATAGGGGGTAGACAAGGAGAAA
TCCTGGCTCCTCCTTCTACGATAGTGACCGATACTGTGATCGGGAACAGC
AGAGAACCTTCTTGGCCGGAGCAATACCTAGACCTCATCGCACCGAACAG
CCTACTGTACCTGGAAGACTTCGCTCAAAACCAGTCACATTCTGCTAATC
TCGTGGAAGCCTCGACTCTGACCACAAAAGCATATGCGCAGTCACGTTAA
GCCAGTTAAATGCCCCATATGTACGGTAACCAAGGCTCAGCAGGTTCATA
TGCGCCGACATATGGAAGTGCATCACGGTGGATGGGCTCGGCAATGGTGG
CAAGTGGGAGTTGTGTGTGAATTATGCGGTAAATCATTCACAAGGAGAGA
CAATCTTCGGAGACACCACCGAAGTCAGCATGAAGATTTTAGTAGCCTCT
GTATCTGAAGACGTGGCTTGGATGGATGCCTGAGTGATGAAGGTTACGAG
AGGACCACCGCAGCTGTGGTTGTTGGAGGACGGGCCGATTCAGGAACATA
TGTTTCGAGGTTTCAGGAAGTGCCAATGCCTTCTTATGATCACGATATTT
CACCAGAGGATGGGCTATATCACTGCCAAGATCGTGCATGCGTGGCCCAG
ACTGGCTTTTCAAGAAAATGTGATTTGCAATGACAACTGTATTTATCGGC
CAGGCTGAGGATGGAAGCCACCCAGCCTGGCCACAGGATGAAGTTACGAG
TTCGTTAGTCGGACGGGTGGGGTTCTCGCCAATCTATTCTGGGGCCGATT
TATCTTCTTTTTCACTTGAGGGCTATTGCGACCCAATGGTGATAGGGGGT
AGACAAGGAGAAATCCTGGCTCCTCCTTCTACGATAGTGACCGATACTGT
GATCGGGAACAGCAGAGAACCTTCTTGGCCGGAGCAATACCTAGACCTCA
TCGCACCGAACAGCCTACTGTACCTGGAAGACTTCGCTCAAAACCAGTCA
CATTCTGCTAATCTCGTGGAAGCCTCGACTCTGACCACA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_326950M747DRAFT_326950Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_326950-T1M747DRAFT_326950-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_326950-T1.cdsM747DRAFT_326950-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_326950-T1.utr3p1M747DRAFT_326950-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_326950-T1.exon3M747DRAFT_326950-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_326950-T1.exon2M747DRAFT_326950-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_326950-T1.exon1M747DRAFT_326950-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF13894
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851976.1supercontigKZ851976.1:1649..2734 -
Powered by Drupal