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M747DRAFT_327180-T1, M747DRAFT_327180-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_327180-T1
Unique NameM747DRAFT_327180-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:229426..230337-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_327180-T1 ID=M747DRAFT_327180-T1|Name=M747DRAFT_327180-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=912bp|location=Sequence derived from alignment at KZ851899.1:229426..230337- (Aspergillus niger ATCC 13496)
CAATATCAATCCCACCATTACTTACCCCTCCTGATCACTATACCCTCCTT
GCCAAACGAGAAACAGCATACAAACCACCCCCACCACCACAACAATAAAC
AGAAGGAGAATAAAGAAATAAAAAATGTCCCTCCAAACCCCCCGCATCCT
CCCCTCCCACCTCCACGCCTTCCACCCCTCCTCCGCCGGCCCACGCACCT
CCCATACCGTCCGTATCCTAGGAACAGTGACTGCTCTGCGCGGCGACACG
GCGACTATGACGTGCGGAAACCACGGCGATGTGACGCTCATCTTGAAGCC
CGATTCGCATTTGCAGATGGGCAAGTTGGTGGAGATTATTGGGAAGGTGG
CGGATCTGGATAATGGGAGTGTATGTTTCAATACCTTATTTTTCCCCCCG
CTATAAATGAGGGGTTGTTCTTGGGTAGGATAATGGCTAATTTTGGTTAT
GTGGCGCTTAGGGCGTGGGTATTAGAGTCCTGGGAAGTACGGATTGGGGG
AGTCCCGCGGATTGCGGTAGGTTTTCTTCTTTTCTTATGGACTATGGAGA
AGGGGTAAAAGGAAAAAGGTGCTAATTGTGGTTGTTGATGTGGCTGCAGA
TTACACGATCTATGAACAGGTTGTCAATGCTACGCATAAGCTCAAGCCTA
TCTTTTATGATGAGTGAGTGGGCTGTTAGGGAGGATGTGGTACAAAATGA
ATGGGTTAGTGGATGGTCTTAGGAGCACTTGTTGAGCTGCCGTGAGATAC
CTTGCTGTTATGGGTGACTACGAGTATCCACCTTATGTGTGCTGCAGTTG
AGGTGTCATTTGCGTCGTATTCGGGTTATTCTTTGGCGTTGGGTTGATTT
ACAATATCTGAATATCAAAACGATATACGATCGATTTTACGGTCTAGTAT
AGTAAACACAGC
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Coding sequence (CDS) from alignment at KZ851899.1:229426..230337-

>M747DRAFT_327180-T1 ID=M747DRAFT_327180-T1|Name=M747DRAFT_327180-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1107bp|location=Sequence derived from alignment at KZ851899.1:229426..230337- (Aspergillus niger ATCC 13496)
ATTACACGATCTATGAACAGGTTGTCAATGCTACGCATAAGCTCAAGCCT
ATCTTTTATGATGAGTGAGGCGTGGGTATTAGAGTCCTGGGAAGTACGGA
TTGGGGGAGTCCCGCGGATTGCGATGTCCCTCCAAACCCCCCGCATCCTC
CCCTCCCACCTCCACGCCTTCCACCCCTCCTCCGCCGGCCCACGCACCTC
CCATACCGTCCGTATCCTAGGAACAGTGACTGCTCTGCGCGGCGACACGG
CGACTATGACGTGCGGAAACCACGGCGATGTGACGCTCATCTTGAAGCCC
GATTCGCATTTGCAGATGGGCAAGTTGGTGGAGATTATTGGGAAGGTGGC
GGATCTGGATAATGGGAGTATTACACGATCTATGAACAGGTTGTCAATGC
TACGCATAAGCTCAAGCCTATCTTTTATGATGAGTGAGGCGTGGGTATTA
GAGTCCTGGGAAGTACGGATTGGGGGAGTCCCGCGGATTGCGATGTCCCT
CCAAACCCCCCGCATCCTCCCCTCCCACCTCCACGCCTTCCACCCCTCCT
CCGCCGGCCCACGCACCTCCCATACCGTCCGTATCCTAGGAACAGTGACT
GCTCTGCGCGGCGACACGGCGACTATGACGTGCGGAAACCACGGCGATGT
GACGCTCATCTTGAAGCCCGATTCGCATTTGCAGATGGGCAAGTTGGTGG
AGATTATTGGGAAGGTGGCGGATCTGGATAATGGGAGTATTACACGATCT
ATGAACAGGTTGTCAATGCTACGCATAAGCTCAAGCCTATCTTTTATGAT
GAGTGAGGCGTGGGTATTAGAGTCCTGGGAAGTACGGATTGGGGGAGTCC
CGCGGATTGCGATGTCCCTCCAAACCCCCCGCATCCTCCCCTCCCACCTC
CACGCCTTCCACCCCTCCTCCGCCGGCCCACGCACCTCCCATACCGTCCG
TATCCTAGGAACAGTGACTGCTCTGCGCGGCGACACGGCGACTATGACGT
GCGGAAACCACGGCGATGTGACGCTCATCTTGAAGCCCGATTCGCATTTG
CAGATGGGCAAGTTGGTGGAGATTATTGGGAAGGTGGCGGATCTGGATAA
TGGGAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006260DNA replication
GO:0006310DNA recombination
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_327180M747DRAFT_327180Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327180-T1M747DRAFT_327180-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327180-T1.cdsM747DRAFT_327180-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327180-T1.utr3p1M747DRAFT_327180-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327180-T1.exon3M747DRAFT_327180-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_327180-T1.exon2M747DRAFT_327180-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_327180-T1.exon1M747DRAFT_327180-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327180-T1.utr5p1M747DRAFT_327180-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR013970
DBxrefPFAM:PF08661
Productreplication factor A protein 3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:229426..230337 -
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