You are here

Home

M747DRAFT_327181-T1, M747DRAFT_327181-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_327181-T1
Unique NameM747DRAFT_327181-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:232150..233618-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_327181-T1 ID=M747DRAFT_327181-T1|Name=M747DRAFT_327181-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1469bp|location=Sequence derived from alignment at KZ851899.1:232150..233618- (Aspergillus niger ATCC 13496)
CTTCGCTCACTCCTGTCGACCATTCAATTCCACCCATACACCTACGAACC
AGCATGAGCATTTCGCCTGATCTTCGAAATTAAATCCCACCAGAATGACC
GACTAGCTCAGCGTGAACCAATACTCCCGTCATCCATCACAACCCACCCT
GAATACCTACCAACCACACACCATCAACATGGCGCAACCCGCCCGCCACG
CCGCGATGCTATCCATTAGCAACAGCGGCCCAAACCTCCCCGTGGCAGCA
TCAGCCGACAGACAGCAACCAGCACAGCACATCCACACGCAATCCCAATC
AAGCCAGGGCCTGCGCGTGCCGTCAAACCGCAAAACCATCTATGACCGAC
ACCTGAACCGCAGCCGCAATGCGGAGCTCAGCCGGGCTAGCTTCGCCTTT
CTGTTCGCGGAGATGGTGACTTATGCTCAGAGACGAGTAACAGGGATTCA
AGATTTAGAACGACGGTATGGGACTTTTACTCTGCTTGCTTCCACCCTCC
CGTTCACATACTGATGATTGGTACTGGTGCAGATTGAACGAACAAGGCTA
CCCCCTAGGTCTCCGACTCCTCGACCTCCTCTTCTACCGCACCATGTCCA
GTTCCACTTCCTCCGCTCTATCCAGTTCCTCCTCGACTTCTTCCTCGCCT
CCGAATCGACCCCTCCGTATCCTTCCCCTCCTTCATCTCATCCACGGTCC
CCTCTGGCGCCTTCTCTTTAATCGTCCTGCCGATGCCCTCGAGCACTCTG
TCTCTCCCGAGACGCCTAATGAATATATGATTACGGATAATGATCCCCTC
GTTAATACATATATCAGTGTGCCGAAGGAAATGAGCATGCTTAATTGCGC
GGCTTTCGTCGCGGGTATTATTGAGGGCGTTTGCGATGGGTGTGGCTTCG
AGGCTAAGGTCACCGCTCATAATCAGCCCACGGAGATGTGGCCTGGGAGG
ACGATATTCTTGTTGCGCTTTGGGGAGAGCGTTATGGAGAGGGAGAAGGT
TTTGGAGAGGGCTGGCGTTAAATAAATAAATGGGATGTGATTGATATATC
CATTGGCTCTACGGTGCATGATCGGCCTTTGTTTCTTATGCAGCGATTTT
GTTTCAATATTATAGAATGCGAACGGGTTCTCGTGACGTGTGGTGTTGTG
GGCTAGGCTGTTTGGGTGTTGGAAGAGGCACGGTTCATATGCGACAGTCG
CCAGCAGCATGCCGAGGATGTGAGTGAGGAGGTGGTGCGATGAGTCGCGC
GGACGGACATGGACATATGTCTTGTATGTGCAACAAGCAAGACATCTGGT
ATTTACTTTGCTGTTCGTCCACTGAACGAACATGCAGGTGTAGTCTATTC
TCCTAGGAGGCCAGGAAGATTGGAACATCCGTCCTAAAATGCATCGATCA
TGACCCTAATCCATCCTTGATCTCAAGAGTTTCCCAACGAACCGATTAGA
AATAGAATGTCCTTATGTC
back to top

Coding sequence (CDS) from alignment at KZ851899.1:232150..233618-

>M747DRAFT_327181-T1 ID=M747DRAFT_327181-T1|Name=M747DRAFT_327181-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1560bp|location=Sequence derived from alignment at KZ851899.1:232150..233618- (Aspergillus niger ATCC 13496)
ATTGAACGAACAAGGCTACCCCCTAGGTCTCCGACTCCTCGACCTCCTCT
TCTACCGCACCATGTCCAGTTCCACTTCCTCCGCTCTATCCAGTTCCTCC
TCGACTTCTTCCTCGCCTCCGAATCGACCCCTCCGTATCCTTCCCCTCCT
TCATCTCATCCACGGTCCCCTCTGGCGCCTTCTCTTTAATCGTCCTGCCG
ATGCCCTCGAGCACTCTGTCTCTCCCGAGACGCCTAATGAATATATGATT
ACGGATAATGATCCCCTCGTTAATACATATATCAGTGTGCCGAAGGAAAT
GAGCATGCTTAATTGCGCGGCTTTCGTCGCGGGTATTATTGAGGGCGTTT
GCGATGGGTGTGGCTTCGAGGCTAAGGTCACCGCTCATAATCAGCCCACG
GAGATGTGGCCTGGGAGGACGATATTCTTGTTGCGCTTTGGGGAGAGCGT
TATGGAGAGGGAGAAGGTTTTGGAGAGGGCTGGCGTTAAATAAATGGCGC
AACCCGCCCGCCACGCCGCGATGCTATCCATTAGCAACAGCGGCCCAAAC
CTCCCCGTGGCAGCATCAGCCGACAGACAGCAACCAGCACAGCACATCCA
CACGCAATCCCAATCAAGCCAGGGCCTGCGCGTGCCGTCAAACCGCAAAA
CCATCTATGACCGACACCTGAACCGCAGCCGCAATGCGGAGCTCAGCCGG
GCTAGCTTCGCCTTTCTGTTCGCGGAGATGGTGACTTATGCTCAGAGACG
AGTAACAGGGATTCAAGATTTAGAACGACGATTGAACGAACAAGGCTACC
CCCTAGGTCTCCGACTCCTCGACCTCCTCTTCTACCGCACCATGTCCAGT
TCCACTTCCTCCGCTCTATCCAGTTCCTCCTCGACTTCTTCCTCGCCTCC
GAATCGACCCCTCCGTATCCTTCCCCTCCTTCATCTCATCCACGGTCCCC
TCTGGCGCCTTCTCTTTAATCGTCCTGCCGATGCCCTCGAGCACTCTGTC
TCTCCCGAGACGCCTAATGAATATATGATTACGGATAATGATCCCCTCGT
TAATACATATATCAGTGTGCCGAAGGAAATGAGCATGCTTAATTGCGCGG
CTTTCGTCGCGGGTATTATTGAGGGCGTTTGCGATGGGTGTGGCTTCGAG
GCTAAGGTCACCGCTCATAATCAGCCCACGGAGATGTGGCCTGGGAGGAC
GATATTCTTGTTGCGCTTTGGGGAGAGCGTTATGGAGAGGGAGAAGGTTT
TGGAGAGGGCTGGCGTTAAATAAATGGCGCAACCCGCCCGCCACGCCGCG
ATGCTATCCATTAGCAACAGCGGCCCAAACCTCCCCGTGGCAGCATCAGC
CGACAGACAGCAACCAGCACAGCACATCCACACGCAATCCCAATCAAGCC
AGGGCCTGCGCGTGCCGTCAAACCGCAAAACCATCTATGACCGACACCTG
AACCGCAGCCGCAATGCGGAGCTCAGCCGGGCTAGCTTCGCCTTTCTGTT
CGCGGAGATGGTGACTTATGCTCAGAGACGAGTAACAGGGATTCAAGATT
TAGAACGACG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030008TRAPP complex
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_327181M747DRAFT_327181Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327181-T1M747DRAFT_327181-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327181-T1.cdsM747DRAFT_327181-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327181-T1.utr3p1M747DRAFT_327181-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327181-T1.exon2M747DRAFT_327181-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_327181-T1.exon1M747DRAFT_327181-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327181-T1.utr5p1M747DRAFT_327181-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263ZW6
DBxrefInterPro:IPR024096
DBxrefInterPro:IPR007194
DBxrefInterPro:IPR016696
DBxrefPFAM:PF04051
ProductTRAPP I complex
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:232150..233618 -
Powered by Drupal