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M747DRAFT_328319-T1, M747DRAFT_328319-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_328319-T1
Unique NameM747DRAFT_328319-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:1015485..1016608-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_328319-T1 ID=M747DRAFT_328319-T1|Name=M747DRAFT_328319-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1124bp|location=Sequence derived from alignment at KZ851901.1:1015485..1016608- (Aspergillus niger ATCC 13496)
GGTGGTTGATGTCGCCGTGGTATAACTTGCTTGGTCCCTTAGAAACATAG
CGGGCTTTTGTGTCATTAAACCATACGTCTCTACCTCGGCGACTCTGAGC
ATCACCATGGCTCCATGATATGAGGGGTCCGCCGTCCGTCCGCTAGATAG
ACTCACCTTATCATCACTGCTATCAAATGGCCCACTGGAAAGAGGAGTAC
TCCGCCGCGCTGGCGGCTCGTGATCGACGAGAGAAAGCCAGCATAGCTAT
CTACGATGCTTGTATGTCGATCACCCTCACTTTCTGGGGTAGTTCACATT
CCCGGAAGTATTCTGACCCTTCTCTGACTATTATGACCAAAATCATTAGA
TACCCAACTGGCCGATCGCACGGTTCACATAGGAGCAACGGCTAGCAACC
CACAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACCCGACACTTCA
GCATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCACAAGACCCATC
TTTACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCAGAGGCACAGC
GGTCACGCTCCGAACTGCAGGACCAGCTCACACGCATGACCACTGACCTA
GAGAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGATCCGCTTATT
CGAAACCGAGATTGCTCATCTTCAACTACGTTTGAAGGATCGAGATGAAG
AGTTGCGTGGGAAGGCAAAGCTACTGGAGGTTTGCTGCTCCGTTACCTCC
TTTTGTGACTCCTTCTGCTGTTGCTGACACCACTTTAGGATTTCCAAGAC
GAGCTGGCATCGTTGAATCTTCAACTGAATATGGCTGAAGAACGGTCATC
CCGACTGCAGAAAGAGAACCAAGATCTCGTTGATCGCTGGATGGCTAGAA
TGGGTAGGGAAGCAGAAGCCATGAACGCTGCCTCTGAGTTCTCATAGAGA
CGGCTACACGACGAACCGACAGGACCGTGATTTCCCCCGCCTGGTACGGG
ATGGCCTAACGATATATAAGACTTTCGTAGAATACATATTATATCCGAAT
GATGCTGTGTCTGTCAGAGGCACACGAGCAGAAGCTATGATTCTCAAGAA
ATGCCATTATTTACTATGTTCTAT
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Coding sequence (CDS) from alignment at KZ851901.1:1015485..1016608-

>M747DRAFT_328319-T1 ID=M747DRAFT_328319-T1|Name=M747DRAFT_328319-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1872bp|location=Sequence derived from alignment at KZ851901.1:1015485..1016608- (Aspergillus niger ATCC 13496)
GATTTCCAAGACGAGCTGGCATCGTTGAATCTTCAACTGAATATGGCTGA
AGAACGGTCATCCCGACTGCAGAAAGAGAACCAAGATCTCGTTGATCGCT
GGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAACGCTGCCTCTGAG
TTCTCATAGATACCCAACTGGCCGATCGCACGGTTCACATAGGAGCAACG
GCTAGCAACCCACAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACC
CGACACTTCAGCATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCAC
AAGACCCATCTTTACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCA
GAGGCACAGCGGTCACGCTCCGAACTGCAGGACCAGCTCACACGCATGAC
CACTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGA
TCCGCTTATTCGAAACCGAGATTGCTCATCTTCAACTACGTTTGAAGGAT
CGAGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTGGAGATGGCCCACTG
GAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCGACGAGAGAAAG
CCAGCATAGCTATCTACGATGCTTGATTTCCAAGACGAGCTGGCATCGTT
GAATCTTCAACTGAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAG
AGAACCAAGATCTCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCA
GAAGCCATGAACGCTGCCTCTGAGTTCTCATAGATACCCAACTGGCCGAT
CGCACGGTTCACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGATCC
GGTTGAAGCGCAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAGCA
AAACGCCGACAGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTCTC
CTAGCAACACGTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAACT
GCAGGACCAGCTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAAGA
GAAGCACTCAGGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTGCT
CATCTTCAACTACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAGGC
AAAGCTACTGGAGATGGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGG
CGGCTCGTGATCGACGAGAGAAAGCCAGCATAGCTATCTACGATGCTTGA
TTTCCAAGACGAGCTGGCATCGTTGAATCTTCAACTGAATATGGCTGAAG
AACGGTCATCCCGACTGCAGAAAGAGAACCAAGATCTCGTTGATCGCTGG
ATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAACGCTGCCTCTGAGTT
CTCATAGATACCCAACTGGCCGATCGCACGGTTCACATAGGAGCAACGGC
TAGCAACCCACAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACCCG
ACACTTCAGCATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCACAA
GACCCATCTTTACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCAGA
GGCACAGCGGTCACGCTCCGAACTGCAGGACCAGCTCACACGCATGACCA
CTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGATC
CGCTTATTCGAAACCGAGATTGCTCATCTTCAACTACGTTTGAAGGATCG
AGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTGGAGATGGCCCACTGGA
AAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCGACGAGAGAAAGCC
AGCATAGCTATCTACGATGCTT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG16M747DRAFT_328319Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328319-T1M747DRAFT_328319-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328319-T1.cdsM747DRAFT_328319-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328319-T1.utr3p1M747DRAFT_328319-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328319-T1.exon3M747DRAFT_328319-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_328319-T1.exon2M747DRAFT_328319-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_328319-T1.exon1M747DRAFT_328319-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328319-T1.utr5p1M747DRAFT_328319-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013923
DBxrefPFAM:PF08614
Product interacts with Atg12p-Atg5p
Productautophagy protein 16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:1015485..1016608 -
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